RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
UBA3-201ENST00000349511 PHACTR3Q96KR7 559 aa17.5■□□□□ 0.39
UBA3-201ENST00000349511 IQSEC2Q5JU85 1478 aa17.49■□□□□ 0.39
UBA3-201ENST00000349511 FCHSD2O94868 740 aa17.49■□□□□ 0.39
UBA3-201ENST00000349511 AEBP1Q8IUX7 1158 aa17.49■□□□□ 0.39
UBA3-201ENST00000349511 LTV1Q96GA3 475 aaPredicted RBP17.49■□□□□ 0.39
UBA3-201ENST00000349511 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
UBA3-201ENST00000349511 RRP1P56182 461 aaKnown RBP17.48■□□□□ 0.39
UBA3-201ENST00000349511 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
UBA3-201ENST00000349511 SULT6B1Q6IMI4 303 aa17.48■□□□□ 0.39
UBA3-201ENST00000349511 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
UBA3-201ENST00000349511 SLAIN2Q9P270 581 aa17.48■□□□□ 0.39
UBA3-201ENST00000349511 KIF1AQ12756 1690 aa17.47■□□□□ 0.39
UBA3-201ENST00000349511 SLFN5Q08AF3 891 aa17.47■□□□□ 0.39
UBA3-201ENST00000349511 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
UBA3-201ENST00000349511 FLT4P35916 1363 aa17.47■□□□□ 0.39
UBA3-201ENST00000349511 GCP02774 474 aa17.46■□□□□ 0.39
UBA3-201ENST00000349511 HOXC9P31274 260 aa17.46■□□□□ 0.39
UBA3-201ENST00000349511 RIPK4P57078 832 aa17.46■□□□□ 0.39
UBA3-201ENST00000349511 RCAN3Q9UKA8 241 aa17.45■□□□□ 0.38
UBA3-201ENST00000349511 TRPM3Q9HCF6 1732 aaPredicted RBP17.45■□□□□ 0.38
UBA3-201ENST00000349511 NEFMP07197 916 aa17.45■□□□□ 0.38
UBA3-201ENST00000349511 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
UBA3-201ENST00000349511 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
UBA3-201ENST00000349511 CABLES1Q8TDN4 633 aa17.44■□□□□ 0.38
UBA3-201ENST00000349511 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
UBA3-201ENST00000349511 ZC3H6P61129 1189 aaKnown RBP17.43■□□□□ 0.38
UBA3-201ENST00000349511 NGEFQ8N5V2 710 aa17.43■□□□□ 0.38
UBA3-201ENST00000349511 KCNH5Q8NCM2 988 aa17.43■□□□□ 0.38
UBA3-201ENST00000349511 LTN1O94822 1766 aa17.43■□□□□ 0.38
UBA3-201ENST00000349511 E9PSI1 815 aa17.42■□□□□ 0.38
UBA3-201ENST00000349511 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
UBA3-201ENST00000349511 EYA1Q99502 592 aa17.42■□□□□ 0.38
UBA3-201ENST00000349511 PHF23Q9BUL5 403 aaPredicted RBP17.42■□□□□ 0.38
UBA3-201ENST00000349511 NOP58Q9Y2X3 529 aaKnown RBP17.42■□□□□ 0.38
UBA3-201ENST00000349511 USP54Q70EL1 1684 aa17.42■□□□□ 0.38
UBA3-201ENST00000349511 CCDC27Q2M243 656 aa17.41■□□□□ 0.38
UBA3-201ENST00000349511 NFAT5O94916 1531 aa17.41■□□□□ 0.38
UBA3-201ENST00000349511 TRMT2AQ8IZ69 625 aaKnown RBP17.41■□□□□ 0.38
UBA3-201ENST00000349511 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
UBA3-201ENST00000349511 THUMPD2Q9BTF0 503 aaKnown RBP17.4■□□□□ 0.38
UBA3-201ENST00000349511 PLIN1O60240 522 aa17.39■□□□□ 0.37
UBA3-201ENST00000349511 NFE2L2Q16236 605 aa17.39■□□□□ 0.37
UBA3-201ENST00000349511 WDR63Q8IWG1 891 aa17.39■□□□□ 0.37
UBA3-201ENST00000349511 IP6K1Q92551 441 aa17.39■□□□□ 0.37
UBA3-201ENST00000349511 BCL11AQ9H165 835 aa17.39■□□□□ 0.37
UBA3-201ENST00000349511 ALS2Q96Q42 1657 aa17.38■□□□□ 0.37
UBA3-201ENST00000349511 ARHGEF25Q86VW2 580 aa17.38■□□□□ 0.37
UBA3-201ENST00000349511 PXDNQ92626 1479 aa17.38■□□□□ 0.37
UBA3-201ENST00000349511 FAM83GA6ND36 823 aa17.38■□□□□ 0.37
UBA3-201ENST00000349511 TSR2Q969E8 191 aaKnown RBP17.38■□□□□ 0.37
UBA3-201ENST00000349511 USP19O94966 1318 aa17.37■□□□□ 0.37
UBA3-201ENST00000349511 SPATA31A3Q5VYP0 1347 aa17.37■□□□□ 0.37
UBA3-201ENST00000349511 DCTN1Q14203 1278 aa17.37■□□□□ 0.37
UBA3-201ENST00000349511 AXIN2Q9Y2T1 843 aa17.37■□□□□ 0.37
UBA3-201ENST00000349511 MED1Q15648 1581 aaPredicted RBP17.36■□□□□ 0.37
UBA3-201ENST00000349511 LRRC59Q96AG4 307 aaKnown RBP17.36■□□□□ 0.37
UBA3-201ENST00000349511 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
UBA3-201ENST00000349511 RGPD1P0DJD0 1748 aa17.36■□□□□ 0.37
UBA3-201ENST00000349511 TNS3Q68CZ2 1445 aa17.36■□□□□ 0.37
UBA3-201ENST00000349511 ANP32AP39687 249 aaKnown RBP17.36■□□□□ 0.37
UBA3-201ENST00000349511 SLIT3O75094 1523 aa17.36■□□□□ 0.37
UBA3-201ENST00000349511 IGSF1Q8N6C5 1336 aa17.36■□□□□ 0.37
UBA3-201ENST00000349511 KIF24Q5T7B8 1368 aa17.35■□□□□ 0.37
UBA3-201ENST00000349511 ARHGEF10O15013 1369 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 CHRNA2Q15822 529 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 NBPF6Q5VWK0 638 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 NBPF4Q96M43 638 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
UBA3-201ENST00000349511 DLG5Q8TDM6 1919 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 RTL1A6NKG5 1358 aa17.34■□□□□ 0.37
UBA3-201ENST00000349511 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.36
UBA3-201ENST00000349511 BCAR3O75815 825 aa17.32■□□□□ 0.36
UBA3-201ENST00000349511 NCBP3Q53F19 620 aaKnown RBP17.32■□□□□ 0.36
UBA3-201ENST00000349511 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
UBA3-201ENST00000349511 MTHFSDQ2M296 383 aaKnown RBP17.32■□□□□ 0.36
UBA3-201ENST00000349511 ANKRD24Q8TF21 1146 aa17.32■□□□□ 0.36
UBA3-201ENST00000349511 MYH16Q9H6N6 1097 aa17.32■□□□□ 0.36
UBA3-201ENST00000349511 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
UBA3-201ENST00000349511 TCERG1O14776 1098 aaKnown RBP17.31■□□□□ 0.36
UBA3-201ENST00000349511 MCM10Q7L590 875 aa17.31■□□□□ 0.36
UBA3-201ENST00000349511 RGPD5Q99666 1765 aa17.31■□□□□ 0.36
UBA3-201ENST00000349511 KDRP35968 1356 aa17.3■□□□□ 0.36
UBA3-201ENST00000349511 HAP1P54257 671 aaPredicted RBP17.29■□□□□ 0.36
UBA3-201ENST00000349511 BCL2L13Q9BXK5 485 aa17.29■□□□□ 0.36
UBA3-201ENST00000349511 PHRF1Q9P1Y6 1649 aaKnown RBP17.29■□□□□ 0.36
UBA3-201ENST00000349511 EXOSC9Q06265 439 aaKnown RBP17.29■□□□□ 0.36
UBA3-201ENST00000349511 KIAA0232Q92628 1395 aa17.28■□□□□ 0.36
UBA3-201ENST00000349511 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
UBA3-201ENST00000349511 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
UBA3-201ENST00000349511 AEBP2Q6ZN18 517 aaPredicted RBP17.27■□□□□ 0.36
UBA3-201ENST00000349511 PIP4K2BP78356 416 aa17.26■□□□□ 0.35
UBA3-201ENST00000349511 NBR1Q14596 966 aa17.26■□□□□ 0.35
UBA3-201ENST00000349511 CRBNQ96SW2 442 aa17.26■□□□□ 0.35
UBA3-201ENST00000349511 IL16Q14005 1332 aa17.26■□□□□ 0.35
UBA3-201ENST00000349511 LMOD3Q0VAK6 560 aa17.26■□□□□ 0.35
UBA3-201ENST00000349511 ERBB3P21860 1342 aa17.25■□□□□ 0.35
UBA3-201ENST00000349511 ROBO1Q9Y6N7 1651 aa17.25■□□□□ 0.35
UBA3-201ENST00000349511 PDE4AP27815 886 aa17.25■□□□□ 0.35
UBA3-201ENST00000349511 ELL2O00472 640 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms