RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 SKAP1Q86WV1 359 aa26.17■■□□□ 1.78
CHRNA3-202ENST00000348639 RBM33Q96EV2 1170 aaKnown RBP26.17■■□□□ 1.78
CHRNA3-202ENST00000348639 ZKSCAN2Q63HK3 967 aa26.17■■□□□ 1.78
CHRNA3-202ENST00000348639 EIF4A2Q14240 407 aaKnown RBP26.15■■□□□ 1.78
CHRNA3-202ENST00000348639 SMC4Q9NTJ3 1288 aa26.15■■□□□ 1.78
CHRNA3-202ENST00000348639 TNNQ9UQP3 1299 aa26.15■■□□□ 1.78
CHRNA3-202ENST00000348639 SSH1Q8WYL5 1049 aa26.14■■□□□ 1.78
CHRNA3-202ENST00000348639 CHD2O14647 1828 aaKnown RBP26.14■■□□□ 1.78
CHRNA3-202ENST00000348639 LMOD3Q0VAK6 560 aa26.14■■□□□ 1.77
CHRNA3-202ENST00000348639 IGHDP01880 384 aa26.13■■□□□ 1.77
CHRNA3-202ENST00000348639 FMN2Q9NZ56 1722 aa26.12■■□□□ 1.77
CHRNA3-202ENST00000348639 PEAK1Q9H792 1746 aa26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 ANP32AP39687 249 aaKnown RBP26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 DZIP1LQ8IYY4 767 aaKnown RBP26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 ZNF428Q96B54 188 aa26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 ANP32EQ9BTT0 268 aa26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 IFT57Q9NWB7 429 aa26.11■■□□□ 1.77
CHRNA3-202ENST00000348639 GNAI1P63096 354 aa26.1■■□□□ 1.77
CHRNA3-202ENST00000348639 MVPQ14764 893 aaKnown RBP26.1■■□□□ 1.77
CHRNA3-202ENST00000348639 ALDH1L2Q3SY69 923 aa26.1■■□□□ 1.77
CHRNA3-202ENST00000348639 HSP90AB2PQ58FF8 381 aa26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 FTSJ3Q8IY81 847 aaKnown RBP26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 NPHP4O75161 1426 aaPredicted RBP26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 ZNF853P0CG23 659 aa26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 THUMPD2Q9BTF0 503 aaKnown RBP26.09■■□□□ 1.77
CHRNA3-202ENST00000348639 SULT6B1Q6IMI4 303 aa26.08■■□□□ 1.77
CHRNA3-202ENST00000348639 KDM4FA0A1W2PPD8 638 aa26.07■■□□□ 1.76
CHRNA3-202ENST00000348639 TRIM27P14373 513 aa26.07■■□□□ 1.76
CHRNA3-202ENST00000348639 ATF7IPQ6VMQ6 1270 aa26.07■■□□□ 1.76
CHRNA3-202ENST00000348639 DLG5Q8TDM6 1919 aa26.07■■□□□ 1.76
CHRNA3-202ENST00000348639 MAP3K19Q56UN5 1328 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 KIF16BQ96L93 1317 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 PIK3C2AO00443 1686 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 NLRP6P59044 892 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 AEBP1Q8IUX7 1158 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 RGPD1P0DJD0 1748 aa26.06■■□□□ 1.76
CHRNA3-202ENST00000348639 PAK3O75914 559 aaPredicted RBP26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 NUTM2GQ5VZR2 741 aa26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 NOB1Q9ULX3 412 aaKnown RBP26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 SBNO1A3KN83 1393 aa26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 BRPF1P55201 1214 aaPredicted RBP26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 PCDHB15Q9Y5E8 787 aa26.05■■□□□ 1.76
CHRNA3-202ENST00000348639 IPO8O15397 1037 aaKnown RBP26.04■■□□□ 1.76
CHRNA3-202ENST00000348639 C14orf37Q86TY3 774 aa26.04■■□□□ 1.76
CHRNA3-202ENST00000348639 CFAP44Q96MT7 982 aa26.04■■□□□ 1.76
CHRNA3-202ENST00000348639 FLT4P35916 1363 aa26.04■■□□□ 1.76
CHRNA3-202ENST00000348639 MBIPQ9NS73 344 aa26.03■■□□□ 1.76
CHRNA3-202ENST00000348639 PHF8Q9UPP1 1060 aa26.02■■□□□ 1.76
CHRNA3-202ENST00000348639 ARHGEF10O15013 1369 aa26.02■■□□□ 1.76
CHRNA3-202ENST00000348639 ABTB2Q8N961 1025 aa26.02■■□□□ 1.76
CHRNA3-202ENST00000348639 IPO9Q96P70 1041 aaKnown RBP26.02■■□□□ 1.76
CHRNA3-202ENST00000348639 VAMP4O75379 141 aa26.01■■□□□ 1.75
CHRNA3-202ENST00000348639 AMPHP49418 695 aa26■■□□□ 1.75
CHRNA3-202ENST00000348639 RGS3P49796 1198 aa26■■□□□ 1.75
CHRNA3-202ENST00000348639 DDX19BQ9UMR2 479 aa26■■□□□ 1.75
CHRNA3-202ENST00000348639 FAM83GA6ND36 823 aa26■■□□□ 1.75
CHRNA3-202ENST00000348639 ADGRL3Q9HAR2 1447 aa25.99■■□□□ 1.75
CHRNA3-202ENST00000348639 ERICH6Q7L0X2 663 aa25.99■■□□□ 1.75
CHRNA3-202ENST00000348639 USP54Q70EL1 1684 aa25.99■■□□□ 1.75
CHRNA3-202ENST00000348639 FAM161AQ3B820 660 aa25.98■■□□□ 1.75
CHRNA3-202ENST00000348639 ESCO1Q5FWF5 840 aa25.98■■□□□ 1.75
CHRNA3-202ENST00000348639 RWDD1Q9H446 243 aaPredicted RBP25.98■■□□□ 1.75
CHRNA3-202ENST00000348639 KIF24Q5T7B8 1368 aa25.98■■□□□ 1.75
CHRNA3-202ENST00000348639 ITPRIPQ8IWB1 547 aa25.97■■□□□ 1.75
CHRNA3-202ENST00000348639 TSPYL6Q8N831 410 aa25.97■■□□□ 1.75
CHRNA3-202ENST00000348639 DCTN1Q14203 1278 aa25.96■■□□□ 1.75
CHRNA3-202ENST00000348639 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
CHRNA3-202ENST00000348639 C8orf34Q49A92 452 aa25.95■■□□□ 1.74
CHRNA3-202ENST00000348639 NOP58Q9Y2X3 529 aaKnown RBP25.95■■□□□ 1.74
CHRNA3-202ENST00000348639 KDRP35968 1356 aa25.95■■□□□ 1.74
CHRNA3-202ENST00000348639 TMEM57Q8N5G2 664 aa25.94■■□□□ 1.74
CHRNA3-202ENST00000348639 MRPL50Q8N5N7 158 aaKnown RBP25.94■■□□□ 1.74
CHRNA3-202ENST00000348639 ARHGAP45Q92619 1136 aa25.94■■□□□ 1.74
CHRNA3-202ENST00000348639 PSME1Q06323 249 aa25.93■■□□□ 1.74
CHRNA3-202ENST00000348639 TWISTNBQ3B726 338 aaPredicted RBP25.93■■□□□ 1.74
CHRNA3-202ENST00000348639 NPM2Q86SE8 214 aaKnown RBP25.93■■□□□ 1.74
CHRNA3-202ENST00000348639 IGSF1Q8N6C5 1336 aa25.93■■□□□ 1.74
CHRNA3-202ENST00000348639 C8orf58Q8NAV2 365 aa25.92■■□□□ 1.74
CHRNA3-202ENST00000348639 EYA1Q99502 592 aa25.91■■□□□ 1.74
CHRNA3-202ENST00000348639 PROSER2Q86WR7 435 aaPredicted RBP25.9■■□□□ 1.74
CHRNA3-202ENST00000348639 ELL2O00472 640 aaPredicted RBP25.9■■□□□ 1.74
CHRNA3-202ENST00000348639 CHL1O00533 1208 aa25.9■■□□□ 1.74
CHRNA3-202ENST00000348639 HOXC9P31274 260 aa25.9■■□□□ 1.74
CHRNA3-202ENST00000348639 ZBTB40Q9NUA8 1239 aa25.9■■□□□ 1.74
CHRNA3-202ENST00000348639 HDAC1Q13547 482 aaPredicted RBP25.89■■□□□ 1.74
CHRNA3-202ENST00000348639 MYT1Q01538 1121 aa25.88■■□□□ 1.73
CHRNA3-202ENST00000348639 MCM10Q7L590 875 aa25.88■■□□□ 1.73
CHRNA3-202ENST00000348639 ORAI2Q96SN7 254 aa25.88■■□□□ 1.73
CHRNA3-202ENST00000348639 ZBTB47Q9UFB7 747 aaPredicted RBP25.87■■□□□ 1.73
CHRNA3-202ENST00000348639 PDZRN3Q9UPQ7 1066 aa25.87■■□□□ 1.73
CHRNA3-202ENST00000348639 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
CHRNA3-202ENST00000348639 NWD1Q149M9 1564 aa25.86■■□□□ 1.73
CHRNA3-202ENST00000348639 HAP1P54257 671 aaPredicted RBP25.85■■□□□ 1.73
CHRNA3-202ENST00000348639 CRB1P82279 1406 aa25.85■■□□□ 1.73
CHRNA3-202ENST00000348639 RTL1A6NKG5 1358 aa25.85■■□□□ 1.73
CHRNA3-202ENST00000348639 FOXO3O43524 673 aa25.85■■□□□ 1.73
CHRNA3-202ENST00000348639 LTV1Q96GA3 475 aaPredicted RBP25.85■■□□□ 1.73
CHRNA3-202ENST00000348639 KIAA0232Q92628 1395 aa25.84■■□□□ 1.73
CHRNA3-202ENST00000348639 GAS2L2Q8NHY3 880 aa25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms