RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 IQGAP2Q13576 1575 aa22.32■■□□□ 1.16
UBE3C-201ENST00000348165 XBP1P17861 261 aa22.31■■□□□ 1.16
UBE3C-201ENST00000348165 CEBPAP49715 358 aaPredicted RBP22.31■■□□□ 1.16
UBE3C-201ENST00000348165 C11orf95C9JLR9 678 aaPredicted RBP22.31■■□□□ 1.16
UBE3C-201ENST00000348165 IDI1Q13907 227 aa22.3■■□□□ 1.16
UBE3C-201ENST00000348165 DCTN1Q14203 1278 aa22.3■■□□□ 1.16
UBE3C-201ENST00000348165 MCM10Q7L590 875 aa22.3■■□□□ 1.16
UBE3C-201ENST00000348165 BRMS1Q9HCU9 246 aa22.3■■□□□ 1.16
UBE3C-201ENST00000348165 IL1RAPL2Q9NP60 686 aa22.3■■□□□ 1.16
UBE3C-201ENST00000348165 CCDC57Q2TAC2 916 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 NME9Q86XW9 330 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 HOMER1Q86YM7 354 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 RNF214Q8ND24 703 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 ADGRF5Q8IZF2 1346 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 STK11IPQ8N1F8 1099 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 PPP1R1BQ9UD71 204 aaPredicted RBP22.29■■□□□ 1.16
UBE3C-201ENST00000348165 RABEP1Q15276 862 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 ABCC5O15440 1437 aa22.29■■□□□ 1.16
UBE3C-201ENST00000348165 CWC22Q9HCG8 908 aaKnown RBP22.28■■□□□ 1.16
UBE3C-201ENST00000348165 CCDC85AQ96PX6 553 aaPredicted RBP22.28■■□□□ 1.16
UBE3C-201ENST00000348165 GNAT3A8MTJ3 354 aa22.27■■□□□ 1.16
UBE3C-201ENST00000348165 GNL3LQ9NVN8 582 aaKnown RBP22.27■■□□□ 1.16
UBE3C-201ENST00000348165 FOXO3O43524 673 aa22.27■■□□□ 1.16
UBE3C-201ENST00000348165 SLFN5Q08AF3 891 aa22.27■■□□□ 1.16
UBE3C-201ENST00000348165 CAMSAP2Q08AD1 1489 aa22.26■■□□□ 1.15
UBE3C-201ENST00000348165 PTCD1O75127 700 aaKnown RBP22.26■■□□□ 1.15
UBE3C-201ENST00000348165 AACSQ86V21 672 aa22.26■■□□□ 1.15
UBE3C-201ENST00000348165 KCNH5Q8NCM2 988 aa22.26■■□□□ 1.15
UBE3C-201ENST00000348165 CHD1LQ86WJ1 897 aa22.26■■□□□ 1.15
UBE3C-201ENST00000348165 FKBP4Q02790 459 aaKnown RBP eCLIP22.26■■□□□ 1.15
UBE3C-201ENST00000348165 MCM2P49736 904 aa22.25■■□□□ 1.15
UBE3C-201ENST00000348165 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
UBE3C-201ENST00000348165 USHBP1Q8N6Y0 703 aa22.25■■□□□ 1.15
UBE3C-201ENST00000348165 ADGRL1O94910 1474 aa22.25■■□□□ 1.15
UBE3C-201ENST00000348165 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 IL27Q8NEV9 243 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 PDCP20941 246 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.24■■□□□ 1.151e-7■■□□□ 14.1
UBE3C-201ENST00000348165 AMOTL2Q9Y2J4 779 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 CEP126Q9P2H0 1117 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 EMILIN1Q9Y6C2 1016 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 FIBPO43427 364 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 CEBPZQ03701 1054 aaKnown RBP22.24■■□□□ 1.15
UBE3C-201ENST00000348165 STK3Q13188 491 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 DUSP27Q5VZP5 1158 aa22.24■■□□□ 1.15
UBE3C-201ENST00000348165 PCF11O94913 1555 aaKnown RBP22.24■■□□□ 1.15
UBE3C-201ENST00000348165 CAVIN1Q6NZI2 390 aaKnown RBP22.23■■□□□ 1.15
UBE3C-201ENST00000348165 PRPF40AO75400 957 aaKnown RBP22.23■■□□□ 1.15
UBE3C-201ENST00000348165 SLC3A2P08195 630 aaKnown RBP22.23■■□□□ 1.15
UBE3C-201ENST00000348165 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.23■■□□□ 1.15
UBE3C-201ENST00000348165 CYP46A1Q9Y6A2 500 aa22.23■■□□□ 1.15
UBE3C-201ENST00000348165 BICDL1Q6ZP65 573 aa22.22■■□□□ 1.15
UBE3C-201ENST00000348165 EXOC6BQ9Y2D4 811 aa22.22■■□□□ 1.15
UBE3C-201ENST00000348165 TRAK2O60296 914 aa22.22■■□□□ 1.15
UBE3C-201ENST00000348165 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
UBE3C-201ENST00000348165 ATP2B2Q01814 1243 aa22.21■■□□□ 1.15
UBE3C-201ENST00000348165 CCDC70Q6NSX1 233 aa22.2■■□□□ 1.14
UBE3C-201ENST00000348165 OLFM4Q6UX06 510 aa22.2■■□□□ 1.14
UBE3C-201ENST00000348165 RPAP2Q8IXW5 612 aaPredicted RBP22.2■■□□□ 1.14
UBE3C-201ENST00000348165 BACH2Q9BYV9 841 aa22.2■■□□□ 1.14
UBE3C-201ENST00000348165 PHF8Q9UPP1 1060 aa22.2■■□□□ 1.14
UBE3C-201ENST00000348165 FMNL2Q96PY5 1086 aa22.19■■□□□ 1.14
UBE3C-201ENST00000348165 NACAP1Q9BZK3 213 aa22.19■■□□□ 1.14
UBE3C-201ENST00000348165 IFT57Q9NWB7 429 aa22.19■■□□□ 1.14
UBE3C-201ENST00000348165 KINO60870 393 aaKnown RBP22.19■■□□□ 1.14
UBE3C-201ENST00000348165 CWC27Q6UX04 472 aaKnown RBP22.18■■□□□ 1.14
UBE3C-201ENST00000348165 MAP7D2Q96T17 732 aa22.18■■□□□ 1.14
UBE3C-201ENST00000348165 WASLO00401 505 aaPredicted RBP22.18■■□□□ 1.14
UBE3C-201ENST00000348165 SSH1Q8WYL5 1049 aa22.18■■□□□ 1.14
UBE3C-201ENST00000348165 NCOA1Q15788 1441 aa22.18■■□□□ 1.14
UBE3C-201ENST00000348165 LAMC3Q9Y6N6 1575 aa22.18■■□□□ 1.14
UBE3C-201ENST00000348165 SF3B2Q13435 895 aaKnown RBP22.18■■□□□ 1.14
UBE3C-201ENST00000348165 STK38Q15208 465 aa22.17■■□□□ 1.14
UBE3C-201ENST00000348165 NAT10Q9H0A0 1025 aaKnown RBP22.17■■□□□ 1.14
UBE3C-201ENST00000348165 NASPP49321 788 aaPredicted RBP22.17■■□□□ 1.14
UBE3C-201ENST00000348165 SPINK5Q9NQ38 1064 aaPredicted RBP22.17■■□□□ 1.14
UBE3C-201ENST00000348165 NUTM1Q86Y26 1132 aa22.16■■□□□ 1.14
UBE3C-201ENST00000348165 BRPF3Q9ULD4 1205 aa22.16■■□□□ 1.14
UBE3C-201ENST00000348165 NAP1L1P55209 391 aaKnown RBP22.16■■□□□ 1.14
UBE3C-201ENST00000348165 MBD3O95983 291 aa22.15■■□□□ 1.14
UBE3C-201ENST00000348165 SETQ01105 290 aaPredicted RBP22.15■■□□□ 1.14
UBE3C-201ENST00000348165 PDILTQ8N807 584 aa22.15■■□□□ 1.14
UBE3C-201ENST00000348165 STARD3NLO95772 234 aa22.15■■□□□ 1.14
UBE3C-201ENST00000348165 MPRIPQ6WCQ1 1025 aa22.14■■□□□ 1.14
UBE3C-201ENST00000348165 TAF7Q15545 349 aaPredicted RBP22.14■■□□□ 1.13
UBE3C-201ENST00000348165 BLOC1S2Q6QNY1 142 aa22.14■■□□□ 1.13
UBE3C-201ENST00000348165 NUP133Q8WUM0 1156 aa22.14■■□□□ 1.13
UBE3C-201ENST00000348165 MTERF4Q7Z6M4 381 aaKnown RBP22.13■■□□□ 1.13
UBE3C-201ENST00000348165 PTPN23Q9H3S7 1636 aa22.13■■□□□ 1.13
UBE3C-201ENST00000348165 OFD1O75665 1012 aa22.13■■□□□ 1.13
UBE3C-201ENST00000348165 MRE11P49959 708 aa22.13■■□□□ 1.13
UBE3C-201ENST00000348165 TRIM5Q9C035 493 aa22.13■■□□□ 1.13
UBE3C-201ENST00000348165 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
UBE3C-201ENST00000348165 RARSP54136 660 aaKnown RBP22.13■■□□□ 1.13
UBE3C-201ENST00000348165 BCL11BQ9C0K0 894 aaPredicted RBP22.13■■□□□ 1.13
UBE3C-201ENST00000348165 ADAMTS2O95450 1211 aa22.12■■□□□ 1.13
UBE3C-201ENST00000348165 IDH1O75874 414 aaKnown RBP22.12■■□□□ 1.13
UBE3C-201ENST00000348165 F6X3S4 739 aa22.12■■□□□ 1.13
UBE3C-201ENST00000348165 ZNF396Q96N95 335 aaPredicted RBP22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms