RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 CENPQQ7L2Z9 268 aaPredicted RBP18.2■□□□□ 0.5
CDK5RAP1-202ENST00000346416 NLRP6P59044 892 aa18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 SULT6B1Q6IMI4 303 aa18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 AEBP1Q8IUX7 1158 aa18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 ADGRL3Q9HAR2 1447 aa18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 THUMPD2Q9BTF0 503 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP1-202ENST00000346416 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
CDK5RAP1-202ENST00000346416 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
CDK5RAP1-202ENST00000346416 RLBP1P12271 317 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 TNNQ9UQP3 1299 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 LAS1LQ9Y4W2 734 aaKnown RBP18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 DLG5Q8TDM6 1919 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 SMC4Q9NTJ3 1288 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 FLT4P35916 1363 aa18.17■□□□□ 0.5
CDK5RAP1-202ENST00000346416 PAK3O75914 559 aaPredicted RBP18.16■□□□□ 0.5
CDK5RAP1-202ENST00000346416 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
CDK5RAP1-202ENST00000346416 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
CDK5RAP1-202ENST00000346416 ABTB2Q8N961 1025 aa18.16■□□□□ 0.5
CDK5RAP1-202ENST00000346416 CLUAP1Q96AJ1 413 aa18.16■□□□□ 0.5
CDK5RAP1-202ENST00000346416 RGPD1P0DJD0 1748 aa18.15■□□□□ 0.5
CDK5RAP1-202ENST00000346416 ZKSCAN2Q63HK3 967 aa18.15■□□□□ 0.5
CDK5RAP1-202ENST00000346416 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
CDK5RAP1-202ENST00000346416 SKAP1Q86WV1 359 aa18.15■□□□□ 0.5
CDK5RAP1-202ENST00000346416 AMPHP49418 695 aa18.14■□□□□ 0.5
CDK5RAP1-202ENST00000346416 GNAI1P63096 354 aa18.14■□□□□ 0.49
CDK5RAP1-202ENST00000346416 IFT57Q9NWB7 429 aa18.14■□□□□ 0.49
CDK5RAP1-202ENST00000346416 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
CDK5RAP1-202ENST00000346416 FAM83GA6ND36 823 aa18.13■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ZNF853P0CG23 659 aa18.13■□□□□ 0.49
CDK5RAP1-202ENST00000346416 MS4A1P11836 297 aa18.13■□□□□ 0.49
CDK5RAP1-202ENST00000346416 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ARHGEF10O15013 1369 aa18.12■□□□□ 0.49
CDK5RAP1-202ENST00000346416 AAMPQ13685 434 aa18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 DCTN1Q14203 1278 aa18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 FTSJ3Q8IY81 847 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 DZIP1LQ8IYY4 767 aaKnown RBP18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 CFAP44Q96MT7 982 aa18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 MBIPQ9NS73 344 aa18.11■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 IGHDP01880 384 aa18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 TRIM27P14373 513 aa18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 PSME1Q06323 249 aa18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 MVPQ14764 893 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ZNF428Q96B54 188 aa18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 NOB1Q9ULX3 412 aaKnown RBP18.1■□□□□ 0.49
CDK5RAP1-202ENST00000346416 ATF7IPQ6VMQ6 1270 aa18.09■□□□□ 0.49
CDK5RAP1-202ENST00000346416 KIF24Q5T7B8 1368 aa18.09■□□□□ 0.49
CDK5RAP1-202ENST00000346416 HOXC9P31274 260 aa18.08■□□□□ 0.49
CDK5RAP1-202ENST00000346416 PROSER2Q86WR7 435 aaPredicted RBP18.08■□□□□ 0.49
CDK5RAP1-202ENST00000346416 EYA1Q99502 592 aa18.08■□□□□ 0.49
CDK5RAP1-202ENST00000346416 VAMP4O75379 141 aa18.08■□□□□ 0.48
CDK5RAP1-202ENST00000346416 KIF16BQ96L93 1317 aa18.08■□□□□ 0.48
CDK5RAP1-202ENST00000346416 KDRP35968 1356 aa18.08■□□□□ 0.48
CDK5RAP1-202ENST00000346416 TSPYL6Q8N831 410 aa18.07■□□□□ 0.48
CDK5RAP1-202ENST00000346416 IGSF1Q8N6C5 1336 aa18.07■□□□□ 0.48
CDK5RAP1-202ENST00000346416 PDE4AP27815 886 aa18.07■□□□□ 0.48
CDK5RAP1-202ENST00000346416 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
CDK5RAP1-202ENST00000346416 IPO8O15397 1037 aaKnown RBP18.06■□□□□ 0.48
CDK5RAP1-202ENST00000346416 PCDHB15Q9Y5E8 787 aa18.05■□□□□ 0.48
CDK5RAP1-202ENST00000346416 ELL2O00472 640 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP1-202ENST00000346416 BRPF1P55201 1214 aaPredicted RBP18.05■□□□□ 0.48
CDK5RAP1-202ENST00000346416 MCM10Q7L590 875 aa18.05■□□□□ 0.48
CDK5RAP1-202ENST00000346416 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
CDK5RAP1-202ENST00000346416 TWISTNBQ3B726 338 aaPredicted RBP18.04■□□□□ 0.48
CDK5RAP1-202ENST00000346416 FOXO3O43524 673 aa18.04■□□□□ 0.48
CDK5RAP1-202ENST00000346416 MTHFSDQ2M296 383 aaKnown RBP18.04■□□□□ 0.48
CDK5RAP1-202ENST00000346416 C8orf58Q8NAV2 365 aa18.04■□□□□ 0.48
CDK5RAP1-202ENST00000346416 ITPRIPQ8IWB1 547 aa18.02■□□□□ 0.48
CDK5RAP1-202ENST00000346416 C19orf44Q9H6X5 657 aa18.02■□□□□ 0.48
CDK5RAP1-202ENST00000346416 RTL1A6NKG5 1358 aa18.02■□□□□ 0.48
CDK5RAP1-202ENST00000346416 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.47
CDK5RAP1-202ENST00000346416 DDX19BQ9UMR2 479 aa18.02■□□□□ 0.47
CDK5RAP1-202ENST00000346416 LTN1O94822 1766 aa18.02■□□□□ 0.47
CDK5RAP1-202ENST00000346416 CHL1O00533 1208 aa18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 MSH5O43196 834 aa18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 RGS3P49796 1198 aa18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 XPCQ01831 940 aaPredicted RBP18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 TMEM57Q8N5G2 664 aa18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 MRPL50Q8N5N7 158 aaKnown RBP18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 NFAT5O94916 1531 aa18.01■□□□□ 0.47
CDK5RAP1-202ENST00000346416 KCNH5Q8NCM2 988 aa18■□□□□ 0.47
CDK5RAP1-202ENST00000346416 GAS2L2Q8NHY3 880 aa17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 RTF1Q92541 710 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 IP6K1Q92551 441 aa17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 CRB1P82279 1406 aa17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 ANP32EQ9BTT0 268 aa17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 RWDD1Q9H446 243 aaPredicted RBP17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 C1orf167Q5SNV9 1468 aa17.99■□□□□ 0.47
CDK5RAP1-202ENST00000346416 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
CDK5RAP1-202ENST00000346416 HSPA2P54652 639 aa17.97■□□□□ 0.47
CDK5RAP1-202ENST00000346416 TMEM94Q12767 1356 aa17.97■□□□□ 0.47
CDK5RAP1-202ENST00000346416 ANP32AP39687 249 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP1-202ENST00000346416 KRT24Q2M2I5 525 aa17.96■□□□□ 0.47
CDK5RAP1-202ENST00000346416 LMOD2Q6P5Q4 547 aa17.96■□□□□ 0.47
CDK5RAP1-202ENST00000346416 KRT28Q7Z3Y7 464 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms