RNA–Protein interactions for RNA: ENST00000346329.7

CTTN-202, Transcript of cortactin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-202ENST00000346329 MBIPQ9NS73 344 aa19.24■□□□□ 0.67
CTTN-202ENST00000346329 MYO3AQ8NEV4 1616 aa19.23■□□□□ 0.67
CTTN-202ENST00000346329 IGHDP01880 384 aa19.22■□□□□ 0.67
CTTN-202ENST00000346329 PLEKHG3A1L390 1219 aa19.22■□□□□ 0.67
CTTN-202ENST00000346329 NBPF6Q5VWK0 638 aa19.22■□□□□ 0.67
CTTN-202ENST00000346329 NBPF4Q96M43 638 aa19.22■□□□□ 0.67
CTTN-202ENST00000346329 RTF1Q92541 710 aaKnown RBP19.22■□□□□ 0.67
CTTN-202ENST00000346329 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
CTTN-202ENST00000346329 NPHP4O75161 1426 aaPredicted RBP19.21■□□□□ 0.67
CTTN-202ENST00000346329 NFE2L2Q16236 605 aa19.21■□□□□ 0.67
CTTN-202ENST00000346329 NPC1L1Q9UHC9 1359 aa19.21■□□□□ 0.67
CTTN-202ENST00000346329 EDC4Q6P2E9 1401 aaKnown RBP19.21■□□□□ 0.67
CTTN-202ENST00000346329 FCHSD2O94868 740 aa19.2■□□□□ 0.66
CTTN-202ENST00000346329 USP6P35125 1406 aa19.2■□□□□ 0.66
CTTN-202ENST00000346329 REREQ9P2R6 1566 aa19.2■□□□□ 0.66
CTTN-202ENST00000346329 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
CTTN-202ENST00000346329 CEP170BQ9Y4F5 1589 aaPredicted RBP19.2■□□□□ 0.66
CTTN-202ENST00000346329 F6X3S4 739 aa19.19■□□□□ 0.66
CTTN-202ENST00000346329 GCP02774 474 aa19.19■□□□□ 0.66
CTTN-202ENST00000346329 HOXC9P31274 260 aa19.19■□□□□ 0.66
CTTN-202ENST00000346329 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
CTTN-202ENST00000346329 ARXQ96QS3 562 aa19.18■□□□□ 0.66
CTTN-202ENST00000346329 LGR6Q9HBX8 967 aa19.18■□□□□ 0.66
CTTN-202ENST00000346329 SLC4A3P48751 1232 aa19.17■□□□□ 0.66
CTTN-202ENST00000346329 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
CTTN-202ENST00000346329 NUTM2BA6NNL0 878 aaPredicted RBP19.17■□□□□ 0.66
CTTN-202ENST00000346329 NUTM2EB1AL46 878 aaPredicted RBP19.17■□□□□ 0.66
CTTN-202ENST00000346329 KCNQ3O43525 872 aa19.17■□□□□ 0.66
CTTN-202ENST00000346329 NUTM2AQ8IVF1 878 aaPredicted RBP19.17■□□□□ 0.66
CTTN-202ENST00000346329 TSPYL4Q9UJ04 414 aa19.17■□□□□ 0.66
CTTN-202ENST00000346329 ZNF330Q9Y3S2 320 aaPredicted RBP19.16■□□□□ 0.66
CTTN-202ENST00000346329 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
CTTN-202ENST00000346329 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
CTTN-202ENST00000346329 TRIM27P14373 513 aa19.15■□□□□ 0.66
CTTN-202ENST00000346329 PCDHB15Q9Y5E8 787 aa19.15■□□□□ 0.66
CTTN-202ENST00000346329 UTRNP46939 3433 aa19.15■□□□□ 0.66
CTTN-202ENST00000346329 C19orf44Q9H6X5 657 aa19.15■□□□□ 0.66
CTTN-202ENST00000346329 ADAMTS2O95450 1211 aa19.14■□□□□ 0.65
CTTN-202ENST00000346329 SLC39A6Q13433 755 aa19.13■□□□□ 0.65
CTTN-202ENST00000346329 MAP2P11137 1827 aaKnown RBP19.13■□□□□ 0.65
CTTN-202ENST00000346329 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
CTTN-202ENST00000346329 PUS7Q96PZ0 661 aaKnown RBP19.13■□□□□ 0.65
CTTN-202ENST00000346329 PRAMEF22A3QJZ6 481 aa19.12■□□□□ 0.65
CTTN-202ENST00000346329 DLC1Q96QB1 1528 aa19.12■□□□□ 0.65
CTTN-202ENST00000346329 NSD2O96028 1365 aa19.12■□□□□ 0.65
CTTN-202ENST00000346329 NEURL4Q96JN8 1562 aa19.11■□□□□ 0.65
CTTN-202ENST00000346329 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
CTTN-202ENST00000346329 G2E3Q7L622 706 aa19.11■□□□□ 0.65
CTTN-202ENST00000346329 DDX54Q8TDD1 881 aaKnown RBP19.11■□□□□ 0.65
CTTN-202ENST00000346329 NINLQ9Y2I6 1382 aa19.1■□□□□ 0.65
CTTN-202ENST00000346329 WDR63Q8IWG1 891 aa19.1■□□□□ 0.65
CTTN-202ENST00000346329 DZIP1LQ8IYY4 767 aaKnown RBP19.1■□□□□ 0.65
CTTN-202ENST00000346329 ZNF530Q6P9A1 599 aaPredicted RBP19.1■□□□□ 0.65
CTTN-202ENST00000346329 ZKSCAN2Q63HK3 967 aa19.1■□□□□ 0.65
CTTN-202ENST00000346329 INSRP06213 1382 aa19.09■□□□□ 0.65
CTTN-202ENST00000346329 RNF123Q5XPI4 1314 aa19.09■□□□□ 0.65
CTTN-202ENST00000346329 DIP2AQ14689 1571 aa19.09■□□□□ 0.65
CTTN-202ENST00000346329 SLC4A2P04920 1241 aa19.09■□□□□ 0.65
CTTN-202ENST00000346329 TRMT2AQ8IZ69 625 aaKnown RBP19.09■□□□□ 0.65
CTTN-202ENST00000346329 AIMP1Q12904 312 aaKnown RBP19.08■□□□□ 0.65
CTTN-202ENST00000346329 RTL5Q5HYW3 569 aaPredicted RBP19.08■□□□□ 0.65
CTTN-202ENST00000346329 JARID2Q92833 1246 aaPredicted RBP19.08■□□□□ 0.65
CTTN-202ENST00000346329 PRDM11Q9NQV5 511 aa19.07■□□□□ 0.64
CTTN-202ENST00000346329 LRRC7Q96NW7 1537 aa19.06■□□□□ 0.64
CTTN-202ENST00000346329 MYT1Q01538 1121 aa19.06■□□□□ 0.64
CTTN-202ENST00000346329 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
CTTN-202ENST00000346329 ARHGAP23Q9P227 1491 aa19.06■□□□□ 0.64
CTTN-202ENST00000346329 SIRT1Q96EB6 747 aa19.06■□□□□ 0.64
CTTN-202ENST00000346329 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
CTTN-202ENST00000346329 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
CTTN-202ENST00000346329 VAMP4O75379 141 aa19.05■□□□□ 0.64
CTTN-202ENST00000346329 SYTL4Q96C24 671 aaPredicted RBP19.04■□□□□ 0.64
CTTN-202ENST00000346329 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
CTTN-202ENST00000346329 PNNQ9H307 717 aaKnown RBP19.04■□□□□ 0.64
CTTN-202ENST00000346329 SLAIN2Q9P270 581 aa19.04■□□□□ 0.64
CTTN-202ENST00000346329 MED14O60244 1454 aa19.04■□□□□ 0.64
CTTN-202ENST00000346329 TECPR2O15040 1411 aa19.04■□□□□ 0.64
CTTN-202ENST00000346329 EP400Q96L91 3159 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 GNAI1P63096 354 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 ERICH6Q7L0X2 663 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 NBR1Q14596 966 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 ATF7IPQ6VMQ6 1270 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 TOM1L2Q6ZVM7 507 aa19.03■□□□□ 0.64
CTTN-202ENST00000346329 SPRYD3Q8NCJ5 442 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 FLT4P35916 1363 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 SHPRHQ149N8 1683 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 SLIT1O75093 1534 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 TEFQ10587 303 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 BRINP3Q76B58 766 aa19.02■□□□□ 0.64
CTTN-202ENST00000346329 CDC42BPGQ6DT37 1551 aa19.01■□□□□ 0.63
CTTN-202ENST00000346329 MSH5O43196 834 aa19.01■□□□□ 0.63
CTTN-202ENST00000346329 EVA1CP58658 441 aa19.01■□□□□ 0.63
CTTN-202ENST00000346329 FKBP5Q13451 457 aaPredicted RBP19.01■□□□□ 0.63
CTTN-202ENST00000346329 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
CTTN-202ENST00000346329 COL3A1P02461 1466 aaPredicted RBP19■□□□□ 0.63
CTTN-202ENST00000346329 MYL6BP14649 208 aa19■□□□□ 0.63
CTTN-202ENST00000346329 PDE4AP27815 886 aa19■□□□□ 0.63
CTTN-202ENST00000346329 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
CTTN-202ENST00000346329 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
CTTN-202ENST00000346329 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms