RNA–Protein interactions for RNA: ENST00000345254.8

SEC24C-202, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24C, Length 4,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-202ENST00000345254 ABCC1P33527 1531 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 CLUAP1Q96AJ1 413 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
SEC24C-202ENST00000345254 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
SEC24C-202ENST00000345254 A2ML1A8K2U0 1454 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 METP08581 1390 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 SMARCC1Q92922 1105 aaPredicted RBP11.76□□□□□ -0.53
SEC24C-202ENST00000345254 CDCA7Q9BWT1 371 aaPredicted RBP11.76□□□□□ -0.53
SEC24C-202ENST00000345254 ARHGEF12Q9NZN5 1544 aa11.76□□□□□ -0.53
SEC24C-202ENST00000345254 KDM5DQ9BY66 1539 aa11.75□□□□□ -0.53
SEC24C-202ENST00000345254 AMOTQ4VCS5 1084 aa11.75□□□□□ -0.53
SEC24C-202ENST00000345254 UNC5CLQ8IV45 518 aa11.75□□□□□ -0.53
SEC24C-202ENST00000345254 TCOF1Q13428 1488 aaKnown RBP11.75□□□□□ -0.53
SEC24C-202ENST00000345254 FAM196AQ6ZSG2 479 aa11.75□□□□□ -0.53
SEC24C-202ENST00000345254 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
SEC24C-202ENST00000345254 NSD3Q9BZ95 1437 aa11.74□□□□□ -0.53
SEC24C-202ENST00000345254 LARP1Q6PKG0 1096 aaKnown RBP11.74□□□□□ -0.53
SEC24C-202ENST00000345254 ZNF652Q9Y2D9 606 aa11.74□□□□□ -0.53
SEC24C-202ENST00000345254 NCLP19338 710 aaKnown RBP11.74□□□□□ -0.53
SEC24C-202ENST00000345254 SLC4A3P48751 1232 aa11.74□□□□□ -0.53
SEC24C-202ENST00000345254 ERVK-7P63135 1459 aa11.74□□□□□ -0.53
SEC24C-202ENST00000345254 DDX11L8A8MPP1 907 aa11.74□□□□□ -0.53
SEC24C-202ENST00000345254 NCBP3Q53F19 620 aaKnown RBP11.74□□□□□ -0.53
SEC24C-202ENST00000345254 SHANK2Q9UPX8 1470 aa11.73□□□□□ -0.53
SEC24C-202ENST00000345254 PRIM1P49642 420 aaKnown RBP11.73□□□□□ -0.53
SEC24C-202ENST00000345254 CDCA7LQ96GN5 454 aa11.73□□□□□ -0.53
SEC24C-202ENST00000345254 HSP90B1P14625 803 aaKnown RBP11.72□□□□□ -0.53
SEC24C-202ENST00000345254 ATF5Q9Y2D1 282 aaPredicted RBP11.72□□□□□ -0.53
SEC24C-202ENST00000345254 RTCBQ9Y3I0 505 aaKnown RBP11.72□□□□□ -0.53
SEC24C-202ENST00000345254 NINLQ9Y2I6 1382 aa11.72□□□□□ -0.53
SEC24C-202ENST00000345254 HDGFL1Q5TGJ6 251 aa11.72□□□□□ -0.53
SEC24C-202ENST00000345254 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
SEC24C-202ENST00000345254 ITPRIPQ8IWB1 547 aa11.72□□□□□ -0.53
SEC24C-202ENST00000345254 GNPATO15228 680 aa11.71□□□□□ -0.53
SEC24C-202ENST00000345254 PZPP20742 1482 aa11.71□□□□□ -0.53
SEC24C-202ENST00000345254 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
SEC24C-202ENST00000345254 GNAT3A8MTJ3 354 aa11.71□□□□□ -0.54
SEC24C-202ENST00000345254 MIS18AQ9NYP9 233 aa11.71□□□□□ -0.54
SEC24C-202ENST00000345254 TULP1O00294 542 aaPredicted RBP11.7□□□□□ -0.54
SEC24C-202ENST00000345254 PDE3AQ14432 1141 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 MSL1Q68DK7 614 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 TRIM34Q9BYJ4 488 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 PARP3Q9Y6F1 533 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 TRPM2O94759 1503 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 RAD21O60216 631 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 CWC22Q9HCG8 908 aaKnown RBP11.7□□□□□ -0.54
SEC24C-202ENST00000345254 PLEKHH1Q9ULM0 1364 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 MSNP26038 577 aaKnown RBP11.7□□□□□ -0.54
SEC24C-202ENST00000345254 GNAI1P63096 354 aa11.7□□□□□ -0.54
SEC24C-202ENST00000345254 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 RIMS1Q86UR5 1692 aaKnown RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 GJD4Q96KN9 370 aaPredicted RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 NOL10Q9BSC4 688 aaKnown RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 SAMD1Q6SPF0 538 aaPredicted RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 RUNDC1Q96C34 613 aa11.69□□□□□ -0.54
SEC24C-202ENST00000345254 NAP1L2Q9ULW6 460 aaPredicted RBP11.69□□□□□ -0.54
SEC24C-202ENST00000345254 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
SEC24C-202ENST00000345254 GPTP24298 496 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 FGD1P98174 961 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 SKOR2Q2VWA4 1001 aaPredicted RBP11.68□□□□□ -0.54
SEC24C-202ENST00000345254 CHMP5Q9NZZ3 219 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 RNF123Q5XPI4 1314 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 SPATA31A6Q5VVP1 1343 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 FAM43AQ8N2R8 423 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 IL27Q8NEV9 243 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 MCM10Q7L590 875 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
SEC24C-202ENST00000345254 RPGRQ92834 1020 aaKnown RBP11.68□□□□□ -0.54
SEC24C-202ENST00000345254 DCTN1Q14203 1278 aa11.68□□□□□ -0.54
SEC24C-202ENST00000345254 SHROOM2Q13796 1616 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 PPP2R1AP30153 589 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 MFAP1P55081 439 aaKnown RBP11.67□□□□□ -0.54
SEC24C-202ENST00000345254 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
SEC24C-202ENST00000345254 COG6Q9Y2V7 657 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 ABCC11Q96J66 1382 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 RBM5P52756 815 aaKnown RBP eCLIP11.67□□□□□ -0.54
SEC24C-202ENST00000345254 SLC39A6Q13433 755 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 ZKSCAN2Q63HK3 967 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 CAMSAP1Q5T5Y3 1602 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 ROBO2Q9HCK4 1378 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 SPRYD3Q8NCJ5 442 aa11.67□□□□□ -0.54
SEC24C-202ENST00000345254 GZF1Q9H116 711 aaPredicted RBP11.67□□□□□ -0.54
SEC24C-202ENST00000345254 FYB1O15117 783 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 TRAPPC3LQ5T215 181 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 PTMAP06454 111 aaKnown RBP11.66□□□□□ -0.54
SEC24C-202ENST00000345254 NBPF6Q5VWK0 638 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 NBPF5PQ86XG9 351 aaPredicted RBP11.66□□□□□ -0.54
SEC24C-202ENST00000345254 NBPF4Q96M43 638 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 FMNL2Q96PY5 1086 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 RALGAPBQ86X10 1494 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 MPHOSPH8Q99549 860 aa11.66□□□□□ -0.54
SEC24C-202ENST00000345254 GLI2P10070 1586 aa11.65□□□□□ -0.54
SEC24C-202ENST00000345254 ZBTB3Q9H5J0 574 aa11.65□□□□□ -0.54
SEC24C-202ENST00000345254 TOMM22Q9NS69 142 aa11.65□□□□□ -0.54
SEC24C-202ENST00000345254 TTLL12Q14166 644 aaPredicted RBP11.65□□□□□ -0.54
SEC24C-202ENST00000345254 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms