RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 IL16Q14005 1332 aa24.05■■□□□ 1.44
HOXA9-201ENST00000343483 NFE2L2Q16236 605 aa24.04■■□□□ 1.44
HOXA9-201ENST00000343483 FRAT1Q92837 279 aaPredicted RBP24.04■■□□□ 1.44
HOXA9-201ENST00000343483 EIF4A2Q14240 407 aaKnown RBP24.04■■□□□ 1.44
HOXA9-201ENST00000343483 BCL2L13Q9BXK5 485 aa24.03■■□□□ 1.44
HOXA9-201ENST00000343483 ILDR1Q86SU0 546 aaPredicted RBP24.02■■□□□ 1.44
HOXA9-201ENST00000343483 C14orf37Q86TY3 774 aa24.02■■□□□ 1.44
HOXA9-201ENST00000343483 UBAP1LF5GYI3 381 aa24.01■■□□□ 1.43
HOXA9-201ENST00000343483 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
HOXA9-201ENST00000343483 EXOSC9Q06265 439 aaKnown RBP24.01■■□□□ 1.43
HOXA9-201ENST00000343483 ADGRL3Q9HAR2 1447 aa24■■□□□ 1.43
HOXA9-201ENST00000343483 NLRP6P59044 892 aa24■■□□□ 1.43
HOXA9-201ENST00000343483 PDE3AQ14432 1141 aa24■■□□□ 1.43
HOXA9-201ENST00000343483 PHF8Q9UPP1 1060 aa24■■□□□ 1.43
HOXA9-201ENST00000343483 MAP3K19Q56UN5 1328 aa24■■□□□ 1.43
HOXA9-201ENST00000343483 PAK3O75914 559 aaPredicted RBP23.99■■□□□ 1.43
HOXA9-201ENST00000343483 PIK3C2AO00443 1686 aa23.99■■□□□ 1.43
HOXA9-201ENST00000343483 NUTM2GQ5VZR2 741 aa23.99■■□□□ 1.43
HOXA9-201ENST00000343483 PEAK1Q9H792 1746 aa23.98■■□□□ 1.43
HOXA9-201ENST00000343483 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
HOXA9-201ENST00000343483 FBXO41Q8TF61 875 aa23.98■■□□□ 1.43
HOXA9-201ENST00000343483 TCERG1O14776 1098 aaKnown RBP23.98■■□□□ 1.43
HOXA9-201ENST00000343483 SULT6B1Q6IMI4 303 aa23.98■■□□□ 1.43
HOXA9-201ENST00000343483 AEBP1Q8IUX7 1158 aa23.98■■□□□ 1.43
HOXA9-201ENST00000343483 PANK1Q8TE04 598 aa23.98■■□□□ 1.43
HOXA9-201ENST00000343483 PIP4K2BP78356 416 aa23.96■■□□□ 1.43
HOXA9-201ENST00000343483 ABTB2Q8N961 1025 aa23.96■■□□□ 1.43
HOXA9-201ENST00000343483 THUMPD2Q9BTF0 503 aaKnown RBP23.96■■□□□ 1.43
HOXA9-201ENST00000343483 LAS1LQ9Y4W2 734 aaKnown RBP23.96■■□□□ 1.43
HOXA9-201ENST00000343483 ESCO1Q5FWF5 840 aa23.95■■□□□ 1.42
HOXA9-201ENST00000343483 SBNO1A3KN83 1393 aa23.95■■□□□ 1.42
HOXA9-201ENST00000343483 AMPHP49418 695 aa23.95■■□□□ 1.42
HOXA9-201ENST00000343483 COG6Q9Y2V7 657 aa23.95■■□□□ 1.42
HOXA9-201ENST00000343483 FLT4P35916 1363 aa23.94■■□□□ 1.42
HOXA9-201ENST00000343483 CALD1Q05682 793 aaKnown RBP23.94■■□□□ 1.42
HOXA9-201ENST00000343483 ERICH6Q7L0X2 663 aa23.93■■□□□ 1.42
HOXA9-201ENST00000343483 LMOD3Q0VAK6 560 aa23.93■■□□□ 1.42
HOXA9-201ENST00000343483 SMC4Q9NTJ3 1288 aa23.93■■□□□ 1.42
HOXA9-201ENST00000343483 KDM2BQ8NHM5 1336 aa23.91■■□□□ 1.42
HOXA9-201ENST00000343483 CENPQQ7L2Z9 268 aaPredicted RBP23.9■■□□□ 1.42
HOXA9-201ENST00000343483 TNNQ9UQP3 1299 aa23.9■■□□□ 1.42
HOXA9-201ENST00000343483 PSME1Q06323 249 aa23.9■■□□□ 1.42
HOXA9-201ENST00000343483 TOM1O60784 492 aa23.89■■□□□ 1.41
HOXA9-201ENST00000343483 RLBP1P12271 317 aa23.89■■□□□ 1.41
HOXA9-201ENST00000343483 SSH1Q8WYL5 1049 aa23.89■■□□□ 1.41
HOXA9-201ENST00000343483 CLUAP1Q96AJ1 413 aa23.89■■□□□ 1.41
HOXA9-201ENST00000343483 MSH6P52701 1360 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 FAM83GA6ND36 823 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 MS4A1P11836 297 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 GNAI1P63096 354 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 ZKSCAN2Q63HK3 967 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 IFT57Q9NWB7 429 aa23.88■■□□□ 1.41
HOXA9-201ENST00000343483 ARHGEF10O15013 1369 aa23.87■■□□□ 1.41
HOXA9-201ENST00000343483 RGPD1P0DJD0 1748 aa23.87■■□□□ 1.41
HOXA9-201ENST00000343483 C19orf44Q9H6X5 657 aa23.87■■□□□ 1.41
HOXA9-201ENST00000343483 ANP32AP39687 249 aaKnown RBP23.86■■□□□ 1.41
HOXA9-201ENST00000343483 DCTN1Q14203 1278 aa23.86■■□□□ 1.41
HOXA9-201ENST00000343483 SKAP1Q86WV1 359 aa23.85■■□□□ 1.41
HOXA9-201ENST00000343483 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
HOXA9-201ENST00000343483 FTSJ3Q8IY81 847 aaKnown RBP23.85■■□□□ 1.41
HOXA9-201ENST00000343483 MARF1Q9Y4F3 1742 aaKnown RBP23.84■■□□□ 1.41
HOXA9-201ENST00000343483 HOXC9P31274 260 aa23.84■■□□□ 1.41
HOXA9-201ENST00000343483 MBIPQ9NS73 344 aa23.84■■□□□ 1.41
HOXA9-201ENST00000343483 ZNF853P0CG23 659 aa23.83■■□□□ 1.41
HOXA9-201ENST00000343483 PDE4AP27815 886 aa23.83■■□□□ 1.41
HOXA9-201ENST00000343483 CFAP44Q96MT7 982 aa23.83■■□□□ 1.41
HOXA9-201ENST00000343483 EYA1Q99502 592 aa23.83■■□□□ 1.41
HOXA9-201ENST00000343483 USP54Q70EL1 1684 aa23.83■■□□□ 1.4
HOXA9-201ENST00000343483 DLG5Q8TDM6 1919 aa23.82■■□□□ 1.4
HOXA9-201ENST00000343483 DZIP1LQ8IYY4 767 aaKnown RBP23.82■■□□□ 1.4
HOXA9-201ENST00000343483 KIF24Q5T7B8 1368 aa23.82■■□□□ 1.4
HOXA9-201ENST00000343483 FOXO3O43524 673 aa23.82■■□□□ 1.4
HOXA9-201ENST00000343483 NCOA3Q9Y6Q9 1424 aa23.82■■□□□ 1.4
HOXA9-201ENST00000343483 IGSF1Q8N6C5 1336 aa23.81■■□□□ 1.4
HOXA9-201ENST00000343483 ATF3P18847 181 aa23.81■■□□□ 1.4
HOXA9-201ENST00000343483 XPCQ01831 940 aaPredicted RBP23.81■■□□□ 1.4
HOXA9-201ENST00000343483 SLAIN2Q9P270 581 aa23.81■■□□□ 1.4
HOXA9-201ENST00000343483 NOB1Q9ULX3 412 aaKnown RBP23.81■■□□□ 1.4
HOXA9-201ENST00000343483 TRIM27P14373 513 aa23.8■■□□□ 1.4
HOXA9-201ENST00000343483 ALDH1L2Q3SY69 923 aa23.8■■□□□ 1.4
HOXA9-201ENST00000343483 BACH2Q9BYV9 841 aa23.8■■□□□ 1.4
HOXA9-201ENST00000343483 KDRP35968 1356 aa23.79■■□□□ 1.4
HOXA9-201ENST00000343483 KIF16BQ96L93 1317 aa23.79■■□□□ 1.4
HOXA9-201ENST00000343483 MVPQ14764 893 aaKnown RBP23.79■■□□□ 1.4
HOXA9-201ENST00000343483 ATF7IPQ6VMQ6 1270 aa23.79■■□□□ 1.4
HOXA9-201ENST00000343483 MCM10Q7L590 875 aa23.79■■□□□ 1.4
HOXA9-201ENST00000343483 LTV1Q96GA3 475 aaPredicted RBP23.79■■□□□ 1.4
HOXA9-201ENST00000343483 TSPYL6Q8N831 410 aa23.79■■□□□ 1.4
HOXA9-201ENST00000343483 ELL2O00472 640 aaPredicted RBP23.78■■□□□ 1.4
HOXA9-201ENST00000343483 AAMPQ13685 434 aa23.78■■□□□ 1.4
HOXA9-201ENST00000343483 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
HOXA9-201ENST00000343483 NOP58Q9Y2X3 529 aaKnown RBP23.78■■□□□ 1.4
HOXA9-201ENST00000343483 VAMP4O75379 141 aa23.77■■□□□ 1.4
HOXA9-201ENST00000343483 IGHDP01880 384 aa23.77■■□□□ 1.4
HOXA9-201ENST00000343483 CADPS2Q86UW7 1296 aa23.77■■□□□ 1.4
HOXA9-201ENST00000343483 IPO9Q96P70 1041 aaKnown RBP23.77■■□□□ 1.4
HOXA9-201ENST00000343483 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
HOXA9-201ENST00000343483 MTHFSDQ2M296 383 aaKnown RBP23.76■■□□□ 1.39
HOXA9-201ENST00000343483 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
HOXA9-201ENST00000343483 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms