RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 PUS7Q96PZ0 661 aaKnown RBP14.42□□□□□ -0.1
TPM3-207ENST00000341372 ST20-MTHFSA0A0A6YYL1 179 aa14.42□□□□□ -0.1
TPM3-207ENST00000341372 NRKQ7Z2Y5 1582 aa14.41□□□□□ -0.1
TPM3-207ENST00000341372 NUTM2BA6NNL0 878 aaPredicted RBP14.41□□□□□ -0.1
TPM3-207ENST00000341372 NUTM2EB1AL46 878 aaPredicted RBP14.41□□□□□ -0.1
TPM3-207ENST00000341372 NUTM2AQ8IVF1 878 aaPredicted RBP14.41□□□□□ -0.1
TPM3-207ENST00000341372 KDM4CQ9H3R0 1056 aa14.41□□□□□ -0.1
TPM3-207ENST00000341372 USP6P35125 1406 aa14.4□□□□□ -0.1
TPM3-207ENST00000341372 MON2Q7Z3U7 1717 aa14.4□□□□□ -0.1
TPM3-207ENST00000341372 MEX3CQ5U5Q3 659 aaKnown RBP14.4□□□□□ -0.1
TPM3-207ENST00000341372 CPSF1Q10570 1443 aaKnown RBP14.4□□□□□ -0.1
TPM3-207ENST00000341372 SSH2Q76I76 1423 aa14.4□□□□□ -0.1
TPM3-207ENST00000341372 CABP1Q9NZU7 370 aa14.39□□□□□ -0.11
TPM3-207ENST00000341372 PHRF1Q9P1Y6 1649 aaKnown RBP14.39□□□□□ -0.11
TPM3-207ENST00000341372 ILDR2Q71H61 639 aa14.39□□□□□ -0.11
TPM3-207ENST00000341372 CD163L1Q9NR16 1453 aa14.38□□□□□ -0.11
TPM3-207ENST00000341372 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.38□□□□□ -0.11
TPM3-207ENST00000341372 NINLQ9Y2I6 1382 aa14.37□□□□□ -0.11
TPM3-207ENST00000341372 ZNF772Q68DY9 489 aaPredicted RBP14.36□□□□□ -0.11
TPM3-207ENST00000341372 POTEAQ6S8J7 498 aa14.36□□□□□ -0.11
TPM3-207ENST00000341372 AFF2P51816 1311 aa14.36□□□□□ -0.11
TPM3-207ENST00000341372 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
TPM3-207ENST00000341372 ADAMTS2O95450 1211 aa14.36□□□□□ -0.11
TPM3-207ENST00000341372 AK7Q96M32 723 aa14.36□□□□□ -0.11
TPM3-207ENST00000341372 NWD2Q9ULI1 1742 aa14.35□□□□□ -0.11
TPM3-207ENST00000341372 SLIT2O94813 1529 aa14.35□□□□□ -0.11
TPM3-207ENST00000341372 PLCH1Q4KWH8 1693 aa14.35□□□□□ -0.11
TPM3-207ENST00000341372 USP54Q70EL1 1684 aa14.35□□□□□ -0.11
TPM3-207ENST00000341372 FNBP4Q8N3X1 1017 aaPredicted RBP14.35□□□□□ -0.11
TPM3-207ENST00000341372 C8orf37Q96NL8 207 aa14.35□□□□□ -0.11
TPM3-207ENST00000341372 E2F4Q16254 413 aa14.34□□□□□ -0.11
TPM3-207ENST00000341372 USP19O94966 1318 aa14.34□□□□□ -0.11
TPM3-207ENST00000341372 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
TPM3-207ENST00000341372 TMF1P82094 1093 aa14.34□□□□□ -0.11
TPM3-207ENST00000341372 CABLES1Q8TDN4 633 aa14.34□□□□□ -0.11
TPM3-207ENST00000341372 SLIT3O75094 1523 aa14.33□□□□□ -0.11
TPM3-207ENST00000341372 MYOM1P52179 1685 aa14.33□□□□□ -0.12
TPM3-207ENST00000341372 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.12
TPM3-207ENST00000341372 BCL9LQ86UU0 1499 aa14.32□□□□□ -0.12
TPM3-207ENST00000341372 CHRM1P11229 460 aaPredicted RBP14.32□□□□□ -0.12
TPM3-207ENST00000341372 NRAPQ86VF7 1730 aa14.32□□□□□ -0.12
TPM3-207ENST00000341372 NGLY1Q96IV0 654 aa14.32□□□□□ -0.12
TPM3-207ENST00000341372 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
TPM3-207ENST00000341372 KTN1Q86UP2 1357 aaKnown RBP14.32□□□□□ -0.12
TPM3-207ENST00000341372 ATRNO75882 1429 aa14.31□□□□□ -0.12
TPM3-207ENST00000341372 A0A1W2PP64 1363 aa14.31□□□□□ -0.12
TPM3-207ENST00000341372 CDK12Q9NYV4 1490 aaPredicted RBP14.31□□□□□ -0.12
TPM3-207ENST00000341372 EIF4G2P78344 907 aaKnown RBP eCLIP14.31□□□□□ -0.12
TPM3-207ENST00000341372 CCDC82Q8N4S0 544 aa14.31□□□□□ -0.12
TPM3-207ENST00000341372 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
TPM3-207ENST00000341372 EDC4Q6P2E9 1401 aaKnown RBP14.3□□□□□ -0.12
TPM3-207ENST00000341372 CDCA8Q53HL2 280 aa14.3□□□□□ -0.12
TPM3-207ENST00000341372 ABTB2Q8N961 1025 aa14.3□□□□□ -0.12
TPM3-207ENST00000341372 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
TPM3-207ENST00000341372 CPDO75976 1380 aa14.29□□□□□ -0.12
TPM3-207ENST00000341372 ANKRD36BQ8N2N9 1353 aa14.29□□□□□ -0.12
TPM3-207ENST00000341372 NLRP13Q86W25 1043 aa14.29□□□□□ -0.12
TPM3-207ENST00000341372 USP21Q9UK80 565 aa14.29□□□□□ -0.12
TPM3-207ENST00000341372 LMO7Q8WWI1 1683 aa14.28□□□□□ -0.12
TPM3-207ENST00000341372 USP31Q70CQ4 1352 aa14.28□□□□□ -0.12
TPM3-207ENST00000341372 HSPA5P11021 654 aaKnown RBP14.28□□□□□ -0.12
TPM3-207ENST00000341372 TMC1Q8TDI8 760 aa14.28□□□□□ -0.12
TPM3-207ENST00000341372 HDGFL2Q7Z4V5 671 aaPredicted RBP14.27□□□□□ -0.12
TPM3-207ENST00000341372 KCTD17Q8N5Z5 321 aa14.27□□□□□ -0.12
TPM3-207ENST00000341372 TERF2IPQ9NYB0 399 aa14.27□□□□□ -0.12
TPM3-207ENST00000341372 FAM212AQ96EL1 285 aa14.27□□□□□ -0.13
TPM3-207ENST00000341372 TRPC5Q9UL62 973 aaPredicted RBP14.27□□□□□ -0.13
TPM3-207ENST00000341372 FAM83GA6ND36 823 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 UNC5CLQ8IV45 518 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 QTRT2Q9H974 415 aaKnown RBP14.26□□□□□ -0.13
TPM3-207ENST00000341372 KIAA0232Q92628 1395 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 GLI3P10071 1580 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 NFAT5O94916 1531 aa14.26□□□□□ -0.13
TPM3-207ENST00000341372 NLRP6P59044 892 aa14.25□□□□□ -0.13
TPM3-207ENST00000341372 RBM6P78332 1123 aaKnown RBP14.25□□□□□ -0.13
TPM3-207ENST00000341372 OVOS2A0A0J9YW53 1432 aa14.25□□□□□ -0.13
TPM3-207ENST00000341372 OVOS2Q6IE36 1432 aa14.25□□□□□ -0.13
TPM3-207ENST00000341372 RXRBP28702 533 aa14.24□□□□□ -0.13
TPM3-207ENST00000341372 COL18A1P39060 1754 aa14.24□□□□□ -0.13
TPM3-207ENST00000341372 RGS12O14924 1447 aa14.24□□□□□ -0.13
TPM3-207ENST00000341372 GCP02774 474 aa14.24□□□□□ -0.13
TPM3-207ENST00000341372 PRDM11Q9NQV5 511 aa14.24□□□□□ -0.13
TPM3-207ENST00000341372 ABCC6O95255 1503 aa14.23□□□□□ -0.13
TPM3-207ENST00000341372 SOCS7O14512 581 aa14.22□□□□□ -0.13
TPM3-207ENST00000341372 PDE4DQ08499 809 aa14.22□□□□□ -0.13
TPM3-207ENST00000341372 VPS72Q15906 364 aa14.22□□□□□ -0.13
TPM3-207ENST00000341372 KIF20BQ96Q89 1820 aa14.22□□□□□ -0.13
TPM3-207ENST00000341372 CAMTA1Q9Y6Y1 1673 aa14.22□□□□□ -0.13
TPM3-207ENST00000341372 SMYD5Q6GMV2 418 aa14.21□□□□□ -0.13
TPM3-207ENST00000341372 NME9Q86XW9 330 aa14.21□□□□□ -0.13
TPM3-207ENST00000341372 BTG4Q9NY30 223 aa14.21□□□□□ -0.13
TPM3-207ENST00000341372 TRIM66O15016 1216 aa14.2□□□□□ -0.14
TPM3-207ENST00000341372 IGSF3O75054 1194 aa14.2□□□□□ -0.14
TPM3-207ENST00000341372 ZC3H6P61129 1189 aaKnown RBP14.2□□□□□ -0.14
TPM3-207ENST00000341372 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.2□□□□□ -0.14
TPM3-207ENST00000341372 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
TPM3-207ENST00000341372 GJD4Q96KN9 370 aaPredicted RBP14.2□□□□□ -0.14
TPM3-207ENST00000341372 FAM117AQ9C073 453 aa14.2□□□□□ -0.14
TPM3-207ENST00000341372 AATKQ6ZMQ8 1374 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms