RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 KRT32Q14532 448 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 PCMTD1Q96MG8 357 aaPredicted RBP9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 NECTIN2Q92692 538 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 RAPGEF3O95398 923 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 AEBP1Q8IUX7 1158 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 TXLNBQ8N3L3 684 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 LNPKQ9C0E8 428 aa9.22□□□□□ -0.93
ATP2B4-201ENST00000341360 CDKL5O76039 1030 aa9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 CCDC57Q2TAC2 916 aa9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 TRIM22Q8IYM9 498 aa9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 MPHOSPH8Q99549 860 aa9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 FAM135AQ9P2D6 1515 aa9.21□□□□□ -0.93
ATP2B4-201ENST00000341360 VPS37CA5D8V6 355 aaPredicted RBP9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 CCDC173Q0VFZ6 552 aa9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 TTC39AQ5SRH9 613 aa9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 NUDT16Q96DE0 195 aaKnown RBP9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 STRN4Q9NRL3 753 aa9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 ACBD3Q9H3P7 528 aa9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 DHX29Q7Z478 1369 aaKnown RBP9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 CDK13Q14004 1512 aaKnown RBP9.21□□□□□ -0.94
ATP2B4-201ENST00000341360 NUTM2BA6NNL0 878 aaPredicted RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 NUTM2EB1AL46 878 aaPredicted RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 NFE2L2Q16236 605 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 NUTM2AQ8IVF1 878 aaPredicted RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 CEP126Q9P2H0 1117 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 TTC21BQ7Z4L5 1316 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 ARHGEF12Q9NZN5 1544 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 SAMD9Q5K651 1589 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 CCP110O43303 1012 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 CCAR1Q8IX12 1150 aaKnown RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 CDCA7LQ96GN5 454 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 MYO6Q9UM54 1294 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 CAMSAP2Q08AD1 1489 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 WDHD1O75717 1129 aaPredicted RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 SLC12A5Q9H2X9 1139 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 LRRCC1Q9C099 1032 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 TMOD2Q9NZR1 351 aa9.2□□□□□ -0.94
ATP2B4-201ENST00000341360 AKAP2Q9Y2D5 859 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 IKQ13123 557 aaPredicted RBP9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 NUTM2GQ5VZR2 741 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 ATF7IPQ6VMQ6 1270 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 CADPS2Q86UW7 1296 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 LUC7LQ9NQ29 371 aaKnown RBP9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 FOXD4L1Q9NU39 408 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 GNAT3A8MTJ3 354 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 PRKCSHP14314 528 aaPredicted RBP9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 FILIP1LQ4L180 1135 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 ZSCAN31Q96LW9 406 aaPredicted RBP9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 DACH1Q9UI36 760 aa9.19□□□□□ -0.94
ATP2B4-201ENST00000341360 OFD1O75665 1012 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 SLC4A2P04920 1241 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 IGHMBP2P38935 993 aaKnown RBP9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 ODF2Q5BJF6 829 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 WASF1Q92558 559 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 CDK5RAP3Q96JB5 506 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 EPS15P42566 896 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 CT47A1Q5JQC4 288 aaPredicted RBP9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 SPATA31E1Q6ZUB1 1445 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 ITSN2Q9NZM3 1697 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 UHRF1BP1Q6BDS2 1440 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 KINO60870 393 aaKnown RBP9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 RAB11FIP3O75154 756 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 CNKSR2Q8WXI2 1034 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 SLC26A8Q96RN1 970 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 BRPF3Q9ULD4 1205 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 NOL7Q9UMY1 257 aaKnown RBP9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 ARHGEF11O15085 1522 aa9.18□□□□□ -0.94
ATP2B4-201ENST00000341360 SDF4Q9BRK5 362 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 PHF8Q9UPP1 1060 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 MRE11P49959 708 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 NBPF1Q3BBV0 1214 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 ALDH1L2Q3SY69 923 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 CYP46A1Q9Y6A2 500 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 DNMT1P26358 1616 aaKnown RBP9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 STIM1Q13586 685 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 HSP90AA2PQ14568 343 aaPredicted RBP9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 SLF2Q8IX21 1173 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 SMARCE1Q969G3 411 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 ARGLU1Q9NWB6 273 aaPredicted RBP9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 IFT57Q9NWB7 429 aa9.17□□□□□ -0.94
ATP2B4-201ENST00000341360 PARD3Q8TEW0 1356 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 BTBD11A6QL63 1104 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 SOGA3Q5TF21 947 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 DNAI2Q9GZS0 605 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 FANCAO15360 1455 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 PUS7Q96PZ0 661 aaKnown RBP9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 NSD3Q9BZ95 1437 aa9.16□□□□□ -0.94
ATP2B4-201ENST00000341360 MVPQ14764 893 aaKnown RBP9.15□□□□□ -0.94
ATP2B4-201ENST00000341360 DDX54Q8TDD1 881 aaKnown RBP9.15□□□□□ -0.94
ATP2B4-201ENST00000341360 PANK1Q8TE04 598 aa9.15□□□□□ -0.94
ATP2B4-201ENST00000341360 MAGEC2Q9UBF1 373 aaPredicted RBP9.15□□□□□ -0.94
ATP2B4-201ENST00000341360 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
ATP2B4-201ENST00000341360 FOXD4L5Q5VV16 416 aaPredicted RBP9.15□□□□□ -0.95
ATP2B4-201ENST00000341360 KRI1Q8N9T8 703 aaKnown RBP9.15□□□□□ -0.95
ATP2B4-201ENST00000341360 FOXD4L4Q8WXT5 416 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms