RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SLC4A3P48751 1232 aa25.65■■□□□ 1.7
SPG7-202ENST00000341316 ITPRIPQ8IWB1 547 aa25.64■■□□□ 1.7
SPG7-202ENST00000341316 TOPAZ1Q8N9V7 1692 aa25.63■■□□□ 1.69
SPG7-202ENST00000341316 TMEM57Q8N5G2 664 aa25.63■■□□□ 1.69
SPG7-202ENST00000341316 NRKQ7Z2Y5 1582 aa25.63■■□□□ 1.69
SPG7-202ENST00000341316 PLEKHG3A1L390 1219 aa25.63■■□□□ 1.69
SPG7-202ENST00000341316 EID1Q9Y6B2 187 aa25.62■■□□□ 1.69
SPG7-202ENST00000341316 SEC24BO95487 1268 aa25.62■■□□□ 1.69
SPG7-202ENST00000341316 ALDH1L2Q3SY69 923 aa25.62■■□□□ 1.69
SPG7-202ENST00000341316 KIF16BQ96L93 1317 aa25.61■■□□□ 1.69
SPG7-202ENST00000341316 DDX19BQ9UMR2 479 aa25.61■■□□□ 1.69
SPG7-202ENST00000341316 AMOTL2Q9Y2J4 779 aa25.61■■□□□ 1.69
SPG7-202ENST00000341316 USP19O94966 1318 aa25.61■■□□□ 1.69
SPG7-202ENST00000341316 ARHGAP23Q9P227 1491 aa25.6■■□□□ 1.69
SPG7-202ENST00000341316 TSPYL6Q8N831 410 aa25.6■■□□□ 1.69
SPG7-202ENST00000341316 SLIT1O75093 1534 aa25.6■■□□□ 1.69
SPG7-202ENST00000341316 ZNF853P0CG23 659 aa25.6■■□□□ 1.69
SPG7-202ENST00000341316 VIRMAQ69YN4 1812 aaKnown RBP25.6■■□□□ 1.69
SPG7-202ENST00000341316 OVOS2A0A0J9YW53 1432 aa25.59■■□□□ 1.69
SPG7-202ENST00000341316 USP6P35125 1406 aa25.59■■□□□ 1.69
SPG7-202ENST00000341316 OVOS2Q6IE36 1432 aa25.59■■□□□ 1.69
SPG7-202ENST00000341316 VAMP4O75379 141 aa25.59■■□□□ 1.69
SPG7-202ENST00000341316 MBIPQ9NS73 344 aa25.59■■□□□ 1.69
SPG7-202ENST00000341316 FAM83GA6ND36 823 aa25.58■■□□□ 1.69
SPG7-202ENST00000341316 IFT57Q9NWB7 429 aa25.58■■□□□ 1.69
SPG7-202ENST00000341316 EIF4A2Q14240 407 aaKnown RBP25.58■■□□□ 1.69
SPG7-202ENST00000341316 AEBP1Q8IUX7 1158 aa25.58■■□□□ 1.69
SPG7-202ENST00000341316 DAXXQ9UER7 740 aaPredicted RBP25.58■■□□□ 1.69
SPG7-202ENST00000341316 IPO8O15397 1037 aaKnown RBP25.57■■□□□ 1.68
SPG7-202ENST00000341316 GNAI1P63096 354 aa25.57■■□□□ 1.68
SPG7-202ENST00000341316 CALD1Q05682 793 aaKnown RBP25.57■■□□□ 1.68
SPG7-202ENST00000341316 ZBTB40Q9NUA8 1239 aa25.56■■□□□ 1.68
SPG7-202ENST00000341316 TBX22Q9Y458 520 aa25.56■■□□□ 1.68
SPG7-202ENST00000341316 DLG5Q8TDM6 1919 aa25.55■■□□□ 1.68
SPG7-202ENST00000341316 BRPF1P55201 1214 aaPredicted RBP25.55■■□□□ 1.68
SPG7-202ENST00000341316 HDAC1Q13547 482 aaPredicted RBP25.55■■□□□ 1.68
SPG7-202ENST00000341316 DCTN1Q14203 1278 aa25.55■■□□□ 1.68
SPG7-202ENST00000341316 NFKBIBQ15653 356 aa25.55■■□□□ 1.68
SPG7-202ENST00000341316 ELL2O00472 640 aaPredicted RBP25.54■■□□□ 1.68
SPG7-202ENST00000341316 SSH2Q76I76 1423 aa25.54■■□□□ 1.68
SPG7-202ENST00000341316 MRPL50Q8N5N7 158 aaKnown RBP25.54■■□□□ 1.68
SPG7-202ENST00000341316 ZNF428Q96B54 188 aa25.54■■□□□ 1.68
SPG7-202ENST00000341316 SULT6B1Q6IMI4 303 aa25.53■■□□□ 1.68
SPG7-202ENST00000341316 HSP90AB2PQ58FF8 381 aa25.52■■□□□ 1.68
SPG7-202ENST00000341316 CFAP44Q96MT7 982 aa25.52■■□□□ 1.68
SPG7-202ENST00000341316 PEAK1Q9H792 1746 aa25.52■■□□□ 1.68
SPG7-202ENST00000341316 FER1L4A9Z1Z3 1794 aa25.52■■□□□ 1.68
SPG7-202ENST00000341316 LMOD3Q0VAK6 560 aa25.51■■□□□ 1.67
SPG7-202ENST00000341316 C8orf58Q8NAV2 365 aa25.51■■□□□ 1.67
SPG7-202ENST00000341316 USP31Q70CQ4 1352 aa25.51■■□□□ 1.67
SPG7-202ENST00000341316 SOX12O15370 315 aa25.51■■□□□ 1.67
SPG7-202ENST00000341316 IL27Q8NEV9 243 aa25.51■■□□□ 1.67
SPG7-202ENST00000341316 PTCH1Q13635 1447 aa25.5■■□□□ 1.67
SPG7-202ENST00000341316 NALCNQ8IZF0 1738 aa25.5■■□□□ 1.67
SPG7-202ENST00000341316 THEMISQ8N1K5 641 aaPredicted RBP25.49■■□□□ 1.67
SPG7-202ENST00000341316 TWISTNBQ3B726 338 aaPredicted RBP25.48■■□□□ 1.67
SPG7-202ENST00000341316 SMC5Q8IY18 1101 aa25.48■■□□□ 1.67
SPG7-202ENST00000341316 DIP2AQ14689 1571 aa25.47■■□□□ 1.67
SPG7-202ENST00000341316 TRHP20396 242 aaPredicted RBP25.46■■□□□ 1.67
SPG7-202ENST00000341316 ARHGAP45Q92619 1136 aa25.46■■□□□ 1.67
SPG7-202ENST00000341316 ZBTB7BO15156 539 aaPredicted RBP25.44■■□□□ 1.66
SPG7-202ENST00000341316 PIK3R4Q99570 1358 aa25.44■■□□□ 1.66
SPG7-202ENST00000341316 RGPD8O14715 1765 aaPredicted RBP25.44■■□□□ 1.66
SPG7-202ENST00000341316 RGPD1P0DJD0 1748 aa25.44■■□□□ 1.66
SPG7-202ENST00000341316 GSE1Q14687 1217 aa25.44■■□□□ 1.66
SPG7-202ENST00000341316 MAP3K19Q56UN5 1328 aa25.44■■□□□ 1.66
SPG7-202ENST00000341316 TTC21AQ8NDW8 1320 aa25.43■■□□□ 1.66
SPG7-202ENST00000341316 NGDNQ8NEJ9 315 aaKnown RBP25.43■■□□□ 1.66
SPG7-202ENST00000341316 MCM10Q7L590 875 aa25.42■■□□□ 1.66
SPG7-202ENST00000341316 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
SPG7-202ENST00000341316 KCNA6P17658 529 aa25.41■■□□□ 1.66
SPG7-202ENST00000341316 ABCC4O15439 1325 aa25.41■■□□□ 1.66
SPG7-202ENST00000341316 KRT24Q2M2I5 525 aa25.4■■□□□ 1.66
SPG7-202ENST00000341316 C1orf115Q9H7X2 142 aa25.39■■□□□ 1.66
SPG7-202ENST00000341316 CHL1O00533 1208 aa25.37■■□□□ 1.65
SPG7-202ENST00000341316 NUCB1Q02818 461 aa25.37■■□□□ 1.65
SPG7-202ENST00000341316 PIK3C2AO00443 1686 aa25.37■■□□□ 1.65
SPG7-202ENST00000341316 TBC1D32Q96NH3 1257 aa25.37■■□□□ 1.65
SPG7-202ENST00000341316 RTN4Q9NQC3 1192 aaKnown RBP25.35■■□□□ 1.65
SPG7-202ENST00000341316 SBNO1A3KN83 1393 aa25.35■■□□□ 1.65
SPG7-202ENST00000341316 ARHGEF10O15013 1369 aa25.35■■□□□ 1.65
SPG7-202ENST00000341316 FOXO3O43524 673 aa25.35■■□□□ 1.65
SPG7-202ENST00000341316 FRAT2O75474 233 aaPredicted RBP25.35■■□□□ 1.65
SPG7-202ENST00000341316 FLT4P35916 1363 aa25.34■■□□□ 1.65
SPG7-202ENST00000341316 SIRT2Q8IXJ6 389 aa25.34■■□□□ 1.65
SPG7-202ENST00000341316 LNPKQ9C0E8 428 aa25.34■■□□□ 1.65
SPG7-202ENST00000341316 CRB1P82279 1406 aa25.33■■□□□ 1.65
SPG7-202ENST00000341316 RIMS1Q86UR5 1692 aaKnown RBP25.33■■□□□ 1.65
SPG7-202ENST00000341316 FMN2Q9NZ56 1722 aa25.33■■□□□ 1.64
SPG7-202ENST00000341316 CEP170BQ9Y4F5 1589 aaPredicted RBP25.32■■□□□ 1.64
SPG7-202ENST00000341316 MTHFSDQ2M296 383 aaKnown RBP25.32■■□□□ 1.64
SPG7-202ENST00000341316 CHD1LQ86WJ1 897 aa25.32■■□□□ 1.64
SPG7-202ENST00000341316 API5Q9BZZ5 524 aaKnown RBP25.32■■□□□ 1.64
SPG7-202ENST00000341316 NUTM2GQ5VZR2 741 aa25.32■■□□□ 1.64
SPG7-202ENST00000341316 UPF2Q9HAU5 1272 aaKnown RBP25.32■■□□□ 1.64
SPG7-202ENST00000341316 AMPHP49418 695 aa25.31■■□□□ 1.64
SPG7-202ENST00000341316 NLRP6P59044 892 aa25.31■■□□□ 1.64
SPG7-202ENST00000341316 EYA1Q99502 592 aa25.31■■□□□ 1.64
SPG7-202ENST00000341316 ANKARQ7Z5J8 1434 aa25.31■■□□□ 1.64
SPG7-202ENST00000341316 MIS18AQ9NYP9 233 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms