RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 ATP7BP35670 1465 aa14.41□□□□□ -0.1
RANBP3-202ENST00000340578 TMEM57Q8N5G2 664 aa14.41□□□□□ -0.1
RANBP3-202ENST00000340578 DLC1Q96QB1 1528 aa14.41□□□□□ -0.1
RANBP3-202ENST00000340578 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
RANBP3-202ENST00000340578 ELL2O00472 640 aaPredicted RBP14.4□□□□□ -0.1
RANBP3-202ENST00000340578 HSP90AA2PQ14568 343 aaPredicted RBP14.4□□□□□ -0.1
RANBP3-202ENST00000340578 USP35Q9P2H5 1018 aa14.4□□□□□ -0.1
RANBP3-202ENST00000340578 NFE2L2Q16236 605 aa14.4□□□□□ -0.1
RANBP3-202ENST00000340578 BRPF3Q9ULD4 1205 aa14.4□□□□□ -0.1
RANBP3-202ENST00000340578 KIF16BQ96L93 1317 aa14.4□□□□□ -0.1
RANBP3-202ENST00000340578 EDC4Q6P2E9 1401 aaKnown RBP14.39□□□□□ -0.11
RANBP3-202ENST00000340578 UPF2Q9HAU5 1272 aaKnown RBP14.39□□□□□ -0.11
RANBP3-202ENST00000340578 IL13P35225 146 aa14.39□□□□□ -0.11
RANBP3-202ENST00000340578 USP19O94966 1318 aa14.38□□□□□ -0.11
RANBP3-202ENST00000340578 ANKRD26Q9UPS8 1709 aa14.38□□□□□ -0.11
RANBP3-202ENST00000340578 LRRC7Q96NW7 1537 aa14.38□□□□□ -0.11
RANBP3-202ENST00000340578 TNRQ92752 1358 aa14.38□□□□□ -0.11
RANBP3-202ENST00000340578 CPSF1Q10570 1443 aaKnown RBP14.38□□□□□ -0.11
RANBP3-202ENST00000340578 NFKBIBQ15653 356 aa14.37□□□□□ -0.11
RANBP3-202ENST00000340578 CHMP4BQ9H444 224 aaKnown RBP14.37□□□□□ -0.11
RANBP3-202ENST00000340578 FAM135BQ49AJ0 1406 aa14.37□□□□□ -0.11
RANBP3-202ENST00000340578 ALDH1L2Q3SY69 923 aa14.36□□□□□ -0.11
RANBP3-202ENST00000340578 KIF20BQ96Q89 1820 aa14.36□□□□□ -0.11
RANBP3-202ENST00000340578 CALD1Q05682 793 aaKnown RBP14.36□□□□□ -0.11
RANBP3-202ENST00000340578 SOX12O15370 315 aa14.36□□□□□ -0.11
RANBP3-202ENST00000340578 TSPYL6Q8N831 410 aa14.36□□□□□ -0.11
RANBP3-202ENST00000340578 GNAI1P63096 354 aa14.35□□□□□ -0.11
RANBP3-202ENST00000340578 ZNF692Q9BU19 519 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-202ENST00000340578 PRR36Q9H6K5 1346 aa14.35□□□□□ -0.11
RANBP3-202ENST00000340578 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
RANBP3-202ENST00000340578 CEBPAP49715 358 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-202ENST00000340578 BBXQ8WY36 941 aaPredicted RBP14.35□□□□□ -0.11
RANBP3-202ENST00000340578 ZBTB40Q9NUA8 1239 aa14.35□□□□□ -0.11
RANBP3-202ENST00000340578 HDAC1Q13547 482 aaPredicted RBP14.34□□□□□ -0.11
RANBP3-202ENST00000340578 SLC26A8Q96RN1 970 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 DCTN1Q14203 1278 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 MBIPQ9NS73 344 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 VAMP4O75379 141 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 BECN1Q14457 450 aa14.34□□□□□ -0.11
RANBP3-202ENST00000340578 ROBO2Q9HCK4 1378 aa14.33□□□□□ -0.11
RANBP3-202ENST00000340578 SIRT1Q96EB6 747 aa14.33□□□□□ -0.12
RANBP3-202ENST00000340578 CPS1P31327 1500 aa14.33□□□□□ -0.12
RANBP3-202ENST00000340578 NRXN3Q9Y4C0 1643 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 SETD1AO15047 1707 aaKnown RBP14.32□□□□□ -0.12
RANBP3-202ENST00000340578 LTKP29376 864 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 IFT57Q9NWB7 429 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 AATKQ6ZMQ8 1374 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 LMOD3Q0VAK6 560 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 TWISTNBQ3B726 338 aaPredicted RBP14.32□□□□□ -0.12
RANBP3-202ENST00000340578 ZNF428Q96B54 188 aa14.32□□□□□ -0.12
RANBP3-202ENST00000340578 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
RANBP3-202ENST00000340578 ACEP12821 1306 aa14.31□□□□□ -0.12
RANBP3-202ENST00000340578 SULT6B1Q6IMI4 303 aa14.31□□□□□ -0.12
RANBP3-202ENST00000340578 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
RANBP3-202ENST00000340578 MFAP1P55081 439 aaKnown RBP14.31□□□□□ -0.12
RANBP3-202ENST00000340578 AEBP1Q8IUX7 1158 aa14.31□□□□□ -0.12
RANBP3-202ENST00000340578 MRPL50Q8N5N7 158 aaKnown RBP14.31□□□□□ -0.12
RANBP3-202ENST00000340578 MAP2P11137 1827 aaKnown RBP14.3□□□□□ -0.12
RANBP3-202ENST00000340578 LNPKQ9C0E8 428 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 CDC42BPGQ6DT37 1551 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 CDK12Q9NYV4 1490 aaPredicted RBP14.3□□□□□ -0.12
RANBP3-202ENST00000340578 TTC21BQ7Z4L5 1316 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 FRAT2O75474 233 aaPredicted RBP14.3□□□□□ -0.12
RANBP3-202ENST00000340578 SMC5Q8IY18 1101 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 CFAP44Q96MT7 982 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 TBC1D32Q96NH3 1257 aa14.3□□□□□ -0.12
RANBP3-202ENST00000340578 EID1Q9Y6B2 187 aa14.29□□□□□ -0.12
RANBP3-202ENST00000340578 EIF4A2Q14240 407 aaKnown RBP14.29□□□□□ -0.12
RANBP3-202ENST00000340578 TECPR2O15040 1411 aa14.29□□□□□ -0.12
RANBP3-202ENST00000340578 RRP9O43818 475 aaKnown RBP14.28□□□□□ -0.12
RANBP3-202ENST00000340578 ZNF853P0CG23 659 aa14.28□□□□□ -0.12
RANBP3-202ENST00000340578 ZBTB7BO15156 539 aaPredicted RBP14.27□□□□□ -0.12
RANBP3-202ENST00000340578 HSP90AB2PQ58FF8 381 aa14.27□□□□□ -0.12
RANBP3-202ENST00000340578 BRPF1P55201 1214 aaPredicted RBP14.27□□□□□ -0.13
RANBP3-202ENST00000340578 ADAMTS13Q76LX8 1427 aa14.27□□□□□ -0.13
RANBP3-202ENST00000340578 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 SAMD1Q6SPF0 538 aaPredicted RBP14.26□□□□□ -0.13
RANBP3-202ENST00000340578 SPRYD3Q8NCJ5 442 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 NUCB1Q02818 461 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 CHD1LQ86WJ1 897 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 ARHGAP45Q92619 1136 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 C22orf23Q9BZE7 217 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 AMOTL2Q9Y2J4 779 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 MCM10Q7L590 875 aa14.26□□□□□ -0.13
RANBP3-202ENST00000340578 GSE1Q14687 1217 aa14.25□□□□□ -0.13
RANBP3-202ENST00000340578 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
RANBP3-202ENST00000340578 NGDNQ8NEJ9 315 aaKnown RBP14.24□□□□□ -0.13
RANBP3-202ENST00000340578 TBC1D2Q9BYX2 928 aa14.24□□□□□ -0.13
RANBP3-202ENST00000340578 PLEKHG3A1L390 1219 aa14.24□□□□□ -0.13
RANBP3-202ENST00000340578 PLEKHG1Q9ULL1 1385 aa14.24□□□□□ -0.13
RANBP3-202ENST00000340578 VIRMAQ69YN4 1812 aaKnown RBP14.23□□□□□ -0.13
RANBP3-202ENST00000340578 API5Q9BZZ5 524 aaKnown RBP14.23□□□□□ -0.13
RANBP3-202ENST00000340578 C14orf37Q86TY3 774 aa14.22□□□□□ -0.13
RANBP3-202ENST00000340578 HSP90AA1P07900 732 aaKnown RBP14.22□□□□□ -0.13
RANBP3-202ENST00000340578 USP6P35125 1406 aa14.21□□□□□ -0.13
RANBP3-202ENST00000340578 ABCC4O15439 1325 aa14.21□□□□□ -0.13
RANBP3-202ENST00000340578 GCC1Q96CN9 775 aa14.21□□□□□ -0.13
RANBP3-202ENST00000340578 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms