RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 ZNF622Q969S3 477 aaKnown RBP eCLIP15.72■□□□□ 0.11
LIN54-201ENST00000340417 SRCIN1Q9C0H9 1055 aa15.72■□□□□ 0.11
LIN54-201ENST00000340417 ERCC6L2Q5T890 1561 aa15.72■□□□□ 0.11
LIN54-201ENST00000340417 NPHP4O75161 1426 aaPredicted RBP15.72■□□□□ 0.11
LIN54-201ENST00000340417 GCP02774 474 aa15.72■□□□□ 0.11
LIN54-201ENST00000340417 STK32BQ9NY57 414 aa15.72■□□□□ 0.11
LIN54-201ENST00000340417 HSP90AB3PQ58FF7 597 aa15.71■□□□□ 0.11
LIN54-201ENST00000340417 TTC39AQ5SRH9 613 aa15.71■□□□□ 0.11
LIN54-201ENST00000340417 DDX17Q92841 729 aaKnown RBP15.71■□□□□ 0.11
LIN54-201ENST00000340417 SAMD9Q5K651 1589 aa15.71■□□□□ 0.11
LIN54-201ENST00000340417 TCOF1Q13428 1488 aaKnown RBP15.71■□□□□ 0.11
LIN54-201ENST00000340417 CCDC85AQ96PX6 553 aaPredicted RBP15.71■□□□□ 0.11
LIN54-201ENST00000340417 LTKP29376 864 aa15.71■□□□□ 0.11
LIN54-201ENST00000340417 FAM98CQ17RN3 349 aaKnown RBP15.71■□□□□ 0.11
LIN54-201ENST00000340417 ERICH2A1L162 156 aa15.71■□□□□ 0.1
LIN54-201ENST00000340417 CCDC158Q5M9N0 1113 aa15.71■□□□□ 0.1
LIN54-201ENST00000340417 NOL8Q76FK4 1167 aaKnown RBP15.71■□□□□ 0.1
LIN54-201ENST00000340417 IKQ13123 557 aaPredicted RBP15.7■□□□□ 0.1
LIN54-201ENST00000340417 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
LIN54-201ENST00000340417 BAG6P46379 1132 aa15.7■□□□□ 0.1
LIN54-201ENST00000340417 CDCA7Q9BWT1 371 aaPredicted RBP15.7■□□□□ 0.1
LIN54-201ENST00000340417 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
LIN54-201ENST00000340417 ST5P78524 1137 aa15.69■□□□□ 0.1
LIN54-201ENST00000340417 YTHDC2Q9H6S0 1430 aaKnown RBP15.69■□□□□ 0.1
LIN54-201ENST00000340417 ANKIB1Q9P2G1 1089 aa15.69■□□□□ 0.1
LIN54-201ENST00000340417 ZBED9Q6R2W3 1325 aa15.69■□□□□ 0.1
LIN54-201ENST00000340417 CLASRPQ8N2M8 674 aaKnown RBP15.69■□□□□ 0.1
LIN54-201ENST00000340417 SPRYD3Q8NCJ5 442 aa15.69■□□□□ 0.1
LIN54-201ENST00000340417 CFAP43Q8NDM7 1665 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 DCTN1Q14203 1278 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
LIN54-201ENST00000340417 ZNF772Q68DY9 489 aaPredicted RBP15.68■□□□□ 0.1
LIN54-201ENST00000340417 TMOD2Q9NZR1 351 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 TMEM94Q12767 1356 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 TRMT112Q9UI30 125 aaKnown RBP15.68■□□□□ 0.1
LIN54-201ENST00000340417 RIMBP3CA6NJZ7 1639 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 RIMBP3BA6NNM3 1639 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 RIMBP3Q9UFD9 1639 aa15.68■□□□□ 0.1
LIN54-201ENST00000340417 ARHGEF10O15013 1369 aa15.67■□□□□ 0.1
LIN54-201ENST00000340417 DNAJC2Q99543 621 aaKnown RBP15.67■□□□□ 0.1
LIN54-201ENST00000340417 SIL1Q9H173 461 aa15.67■□□□□ 0.1
LIN54-201ENST00000340417 CCT4P50991 539 aaKnown RBP15.67■□□□□ 0.1
LIN54-201ENST00000340417 NBR1Q14596 966 aa15.67■□□□□ 0.1
LIN54-201ENST00000340417 KIF3AQ9Y496 699 aa15.67■□□□□ 0.1
LIN54-201ENST00000340417 ZSCAN29Q8IWY8 852 aaPredicted RBP15.67■□□□□ 0.1
LIN54-201ENST00000340417 NSD2O96028 1365 aa15.67■□□□□ 0.1
LIN54-201ENST00000340417 GNAI2P04899 355 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 TMPOP42166 694 aaKnown RBP15.66■□□□□ 0.1
LIN54-201ENST00000340417 NFXL1Q6ZNB6 911 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 ZNF335Q9H4Z2 1342 aaPredicted RBP15.66■□□□□ 0.1
LIN54-201ENST00000340417 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 MAST1Q9Y2H9 1570 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 HTATSF1O43719 755 aaKnown RBP15.66■□□□□ 0.1
LIN54-201ENST00000340417 CPLX2Q6PUV4 134 aaKnown RBP15.66■□□□□ 0.1
LIN54-201ENST00000340417 CRBNQ96SW2 442 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 NPATQ14207 1427 aa15.66■□□□□ 0.1
LIN54-201ENST00000340417 GPTP24298 496 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 RRP1P56182 461 aaKnown RBP15.65■□□□□ 0.1
LIN54-201ENST00000340417 HSP90AB2PQ58FF8 381 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 DUSP27Q5VZP5 1158 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 MTMR7Q9Y216 660 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 RXRBP28702 533 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 C16orf71Q8IYS4 520 aaPredicted RBP15.65■□□□□ 0.1
LIN54-201ENST00000340417 THUMPD2Q9BTF0 503 aaKnown RBP15.65■□□□□ 0.1
LIN54-201ENST00000340417 ANP32EQ9BTT0 268 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 QTRT2Q9H974 415 aaKnown RBP15.65■□□□□ 0.1
LIN54-201ENST00000340417 ABCC1P33527 1531 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 TTLL12Q14166 644 aaPredicted RBP15.65■□□□□ 0.1
LIN54-201ENST00000340417 MYD88Q99836 296 aa15.65■□□□□ 0.1
LIN54-201ENST00000340417 SLC3A2P08195 630 aaKnown RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 SLC4A3P48751 1232 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 PARP3Q9Y6F1 533 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 WDHD1O75717 1129 aaPredicted RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 LARP1Q6PKG0 1096 aaKnown RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 UGGT1Q9NYU2 1555 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 APBA3O96018 575 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 ZKSCAN1P17029 563 aaPredicted RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 NBPF6Q5VWK0 638 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 NBPF5PQ86XG9 351 aaPredicted RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 WDR63Q8IWG1 891 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 NBPF4Q96M43 638 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 PLCB2Q00722 1185 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 RTCBQ9Y3I0 505 aaKnown RBP15.64■□□□□ 0.09
LIN54-201ENST00000340417 FBLN1P23142 703 aa15.64■□□□□ 0.09
LIN54-201ENST00000340417 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
LIN54-201ENST00000340417 ZBTB3Q9H5J0 574 aa15.63■□□□□ 0.09
LIN54-201ENST00000340417 ANKRD36BQ8N2N9 1353 aa15.63■□□□□ 0.09
LIN54-201ENST00000340417 CEP126Q9P2H0 1117 aa15.63■□□□□ 0.09
LIN54-201ENST00000340417 PPP1R42Q7Z4L9 355 aa15.63■□□□□ 0.09
LIN54-201ENST00000340417 DNMT1P26358 1616 aaKnown RBP15.63■□□□□ 0.09
LIN54-201ENST00000340417 TRPC5Q9UL62 973 aaPredicted RBP15.62■□□□□ 0.09
LIN54-201ENST00000340417 C6orf229H3BNL8 230 aa15.62■□□□□ 0.09
LIN54-201ENST00000340417 FSD1Q9BTV5 496 aa15.62■□□□□ 0.09
LIN54-201ENST00000340417 ATP2B2Q01814 1243 aa15.62■□□□□ 0.09
LIN54-201ENST00000340417 NOB1Q9ULX3 412 aaKnown RBP15.62■□□□□ 0.09
LIN54-201ENST00000340417 CHAF1AQ13111 956 aaPredicted RBP15.62■□□□□ 0.09
LIN54-201ENST00000340417 RNF20Q5VTR2 975 aa15.62■□□□□ 0.09
LIN54-201ENST00000340417 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
LIN54-201ENST00000340417 SETDB2Q96T68 719 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms