RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ITSN1Q15811 1721 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 TOPAZ1Q8N9V7 1692 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 COG6Q9Y2V7 657 aa9.61□□□□□ -0.87
SRFBP1-201ENST00000339397 NPHP4O75161 1426 aaPredicted RBP9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 PIK3R4Q99570 1358 aa9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 FOXO3O43524 673 aa9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 PHF8Q9UPP1 1060 aa9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 ELL2O00472 640 aaPredicted RBP9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 ILDR1Q86SU0 546 aaPredicted RBP9.6□□□□□ -0.87
SRFBP1-201ENST00000339397 NRKQ7Z2Y5 1582 aa9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 NFE2L2Q16236 605 aa9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 MYH16Q9H6N6 1097 aa9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 CDK12Q9NYV4 1490 aaPredicted RBP9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 CHD2O14647 1828 aaKnown RBP9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 CANXP27824 592 aaKnown RBP9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 USP31Q70CQ4 1352 aa9.59□□□□□ -0.87
SRFBP1-201ENST00000339397 TCERG1O14776 1098 aaKnown RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 PROSER2Q86WR7 435 aaPredicted RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 TSPYL6Q8N831 410 aa9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 DDX17Q92841 729 aaKnown RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 LTV1Q96GA3 475 aaPredicted RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 TTC21AQ8NDW8 1320 aa9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 SSH1Q8WYL5 1049 aa9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 PEAK1Q9H792 1746 aa9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 ZNF142P52746 1687 aaPredicted RBP9.58□□□□□ -0.88
SRFBP1-201ENST00000339397 AMPHP49418 695 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 PSME1Q06323 249 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 NALCNQ8IZF0 1738 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 PNNQ9H307 717 aaKnown RBP9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 ZBTB7CA1YPR0 619 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 NEFMP07197 916 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 MCM10Q7L590 875 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 EYA1Q99502 592 aa9.57□□□□□ -0.88
SRFBP1-201ENST00000339397 IGHDP01880 384 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 KRT24Q2M2I5 525 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 LMOD2Q6P5Q4 547 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 MBIPQ9NS73 344 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 MIS18AQ9NYP9 233 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 PIK3C2AO00443 1686 aa9.56□□□□□ -0.88
SRFBP1-201ENST00000339397 USHBP1Q8N6Y0 703 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 SMC4Q9NTJ3 1288 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 ANKARQ7Z5J8 1434 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 ADGRL3Q9HAR2 1447 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 KDM2BQ8NHM5 1336 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 FMN2Q9NZ56 1722 aa9.55□□□□□ -0.88
SRFBP1-201ENST00000339397 HOXC9P31274 260 aa9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 NOB1Q9ULX3 412 aaKnown RBP9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 TRIM27P14373 513 aa9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 MTHFSDQ2M296 383 aaKnown RBP9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 IL16Q14005 1332 aa9.54□□□□□ -0.88
SRFBP1-201ENST00000339397 PCDHB15Q9Y5E8 787 aa9.53□□□□□ -0.88
SRFBP1-201ENST00000339397 ZNF853P0CG23 659 aa9.53□□□□□ -0.88
SRFBP1-201ENST00000339397 SBNO1A3KN83 1393 aa9.53□□□□□ -0.88
SRFBP1-201ENST00000339397 FLT4P35916 1363 aa9.53□□□□□ -0.88
SRFBP1-201ENST00000339397 VAMP4O75379 141 aa9.53□□□□□ -0.88
SRFBP1-201ENST00000339397 C19orf44Q9H6X5 657 aa9.52□□□□□ -0.89
SRFBP1-201ENST00000339397 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
SRFBP1-201ENST00000339397 DAXXQ9UER7 740 aaPredicted RBP9.52□□□□□ -0.89
SRFBP1-201ENST00000339397 DLG5Q8TDM6 1919 aa9.51□□□□□ -0.89
SRFBP1-201ENST00000339397 LRRC59Q96AG4 307 aaKnown RBP9.51□□□□□ -0.89
SRFBP1-201ENST00000339397 TMEM94Q12767 1356 aa9.51□□□□□ -0.89
SRFBP1-201ENST00000339397 ZKSCAN2Q63HK3 967 aa9.51□□□□□ -0.89
SRFBP1-201ENST00000339397 RGS3P49796 1198 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 GNAI1P63096 354 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 NBPF6Q5VWK0 638 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 KRT28Q7Z3Y7 464 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 DZIP1LQ8IYY4 767 aaKnown RBP9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 NBPF4Q96M43 638 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 IFT57Q9NWB7 429 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 MARF1Q9Y4F3 1742 aaKnown RBP9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 MSH5O43196 834 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 GCP02774 474 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 MYT1Q01538 1121 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 FTSJ3Q8IY81 847 aaKnown RBP9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 TMEM57Q8N5G2 664 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 IGSF1Q8N6C5 1336 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
SRFBP1-201ENST00000339397 TWISTNBQ3B726 338 aaPredicted RBP9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 ATF7IPQ6VMQ6 1270 aa9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 CENPQQ7L2Z9 268 aaPredicted RBP9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 CT47B1P0C2W7 299 aaPredicted RBP9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 MVPQ14764 893 aaKnown RBP9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 ITPRIPQ8IWB1 547 aa9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 CABLES1Q8TDN4 633 aa9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 ZC3H6P61129 1189 aaKnown RBP9.49□□□□□ -0.89
SRFBP1-201ENST00000339397 STRCP1A6NGW2 1772 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 ATF3P18847 181 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 IP6K1Q92551 441 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 C1orf167Q5SNV9 1468 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 RGPD1P0DJD0 1748 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 KDRP35968 1356 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 CHL1O00533 1208 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 PDE4AP27815 886 aa9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 MRPL50Q8N5N7 158 aaKnown RBP9.48□□□□□ -0.89
SRFBP1-201ENST00000339397 ARHGEF10O15013 1369 aa9.47□□□□□ -0.89
SRFBP1-201ENST00000339397 LMOD3Q0VAK6 560 aa9.47□□□□□ -0.89
SRFBP1-201ENST00000339397 IL17REQ8NFR9 667 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms