RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
SCNN1A-202ENST00000338748 NEFMP07197 916 aa20.98■□□□□ 0.95
SCNN1A-202ENST00000338748 CENPQQ7L2Z9 268 aaPredicted RBP20.98■□□□□ 0.95
SCNN1A-202ENST00000338748 MSH5O43196 834 aa20.97■□□□□ 0.95
SCNN1A-202ENST00000338748 CLUAP1Q96AJ1 413 aa20.97■□□□□ 0.95
SCNN1A-202ENST00000338748 MAP3K19Q56UN5 1328 aa20.97■□□□□ 0.95
SCNN1A-202ENST00000338748 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
SCNN1A-202ENST00000338748 SSH1Q8WYL5 1049 aa20.96■□□□□ 0.95
SCNN1A-202ENST00000338748 RGPD1P0DJD0 1748 aa20.96■□□□□ 0.95
SCNN1A-202ENST00000338748 MARF1Q9Y4F3 1742 aaKnown RBP20.96■□□□□ 0.95
SCNN1A-202ENST00000338748 CT47B1P0C2W7 299 aaPredicted RBP20.95■□□□□ 0.94
SCNN1A-202ENST00000338748 SULT6B1Q6IMI4 303 aa20.95■□□□□ 0.94
SCNN1A-202ENST00000338748 LAS1LQ9Y4W2 734 aaKnown RBP20.95■□□□□ 0.94
SCNN1A-202ENST00000338748 FAM83GA6ND36 823 aa20.94■□□□□ 0.94
SCNN1A-202ENST00000338748 NPHP4O75161 1426 aaPredicted RBP20.94■□□□□ 0.94
SCNN1A-202ENST00000338748 NUTM2GQ5VZR2 741 aa20.94■□□□□ 0.94
SCNN1A-202ENST00000338748 SMC4Q9NTJ3 1288 aa20.94■□□□□ 0.94
SCNN1A-202ENST00000338748 IGHDP01880 384 aa20.94■□□□□ 0.94
SCNN1A-202ENST00000338748 DCTN1Q14203 1278 aa20.92■□□□□ 0.94
SCNN1A-202ENST00000338748 NLRP6P59044 892 aa20.91■□□□□ 0.94
SCNN1A-202ENST00000338748 ADGRL3Q9HAR2 1447 aa20.91■□□□□ 0.94
SCNN1A-202ENST00000338748 TRIM27P14373 513 aa20.9■□□□□ 0.94
SCNN1A-202ENST00000338748 ZKSCAN2Q63HK3 967 aa20.9■□□□□ 0.94
SCNN1A-202ENST00000338748 SBNO1A3KN83 1393 aa20.89■□□□□ 0.94
SCNN1A-202ENST00000338748 FLT4P35916 1363 aa20.89■□□□□ 0.94
SCNN1A-202ENST00000338748 ZNF853P0CG23 659 aa20.89■□□□□ 0.93
SCNN1A-202ENST00000338748 MS4A1P11836 297 aa20.89■□□□□ 0.93
SCNN1A-202ENST00000338748 PDE4AP27815 886 aa20.89■□□□□ 0.93
SCNN1A-202ENST00000338748 MBIPQ9NS73 344 aa20.89■□□□□ 0.93
SCNN1A-202ENST00000338748 PHF8Q9UPP1 1060 aa20.89■□□□□ 0.93
SCNN1A-202ENST00000338748 TSPYL6Q8N831 410 aa20.88■□□□□ 0.93
SCNN1A-202ENST00000338748 PCDHB15Q9Y5E8 787 aa20.88■□□□□ 0.93
SCNN1A-202ENST00000338748 PAK3O75914 559 aaPredicted RBP20.88■□□□□ 0.93
SCNN1A-202ENST00000338748 IFT57Q9NWB7 429 aa20.88■□□□□ 0.93
SCNN1A-202ENST00000338748 NOB1Q9ULX3 412 aaKnown RBP20.87■□□□□ 0.93
SCNN1A-202ENST00000338748 MVPQ14764 893 aaKnown RBP20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 DZIP1LQ8IYY4 767 aaKnown RBP20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 ABTB2Q8N961 1025 aa20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 BACH2Q9BYV9 841 aa20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 USP54Q70EL1 1684 aa20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 FTSJ3Q8IY81 847 aaKnown RBP20.86■□□□□ 0.93
SCNN1A-202ENST00000338748 ARHGEF10O15013 1369 aa20.85■□□□□ 0.93
SCNN1A-202ENST00000338748 AMPHP49418 695 aa20.85■□□□□ 0.93
SCNN1A-202ENST00000338748 GNAI1P63096 354 aa20.85■□□□□ 0.93
SCNN1A-202ENST00000338748 ATF7IPQ6VMQ6 1270 aa20.85■□□□□ 0.93
SCNN1A-202ENST00000338748 CALD1Q05682 793 aaKnown RBP20.84■□□□□ 0.93
SCNN1A-202ENST00000338748 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
SCNN1A-202ENST00000338748 ELL2O00472 640 aaPredicted RBP20.84■□□□□ 0.93
SCNN1A-202ENST00000338748 CFAP44Q96MT7 982 aa20.84■□□□□ 0.93
SCNN1A-202ENST00000338748 VAMP4O75379 141 aa20.83■□□□□ 0.93
SCNN1A-202ENST00000338748 RGS3P49796 1198 aa20.83■□□□□ 0.93
SCNN1A-202ENST00000338748 ESCO1Q5FWF5 840 aa20.83■□□□□ 0.93
SCNN1A-202ENST00000338748 C14orf37Q86TY3 774 aa20.83■□□□□ 0.93
SCNN1A-202ENST00000338748 NWD1Q149M9 1564 aa20.83■□□□□ 0.92
SCNN1A-202ENST00000338748 MCM10Q7L590 875 aa20.82■□□□□ 0.92
SCNN1A-202ENST00000338748 EYA1Q99502 592 aa20.82■□□□□ 0.92
SCNN1A-202ENST00000338748 KDRP35968 1356 aa20.82■□□□□ 0.92
SCNN1A-202ENST00000338748 ALDH1L2Q3SY69 923 aa20.82■□□□□ 0.92
SCNN1A-202ENST00000338748 FOXO3O43524 673 aa20.81■□□□□ 0.92
SCNN1A-202ENST00000338748 C8orf58Q8NAV2 365 aa20.81■□□□□ 0.92
SCNN1A-202ENST00000338748 IGSF1Q8N6C5 1336 aa20.81■□□□□ 0.92
SCNN1A-202ENST00000338748 HOXC9P31274 260 aa20.81■□□□□ 0.92
SCNN1A-202ENST00000338748 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
SCNN1A-202ENST00000338748 TMEM57Q8N5G2 664 aa20.8■□□□□ 0.92
SCNN1A-202ENST00000338748 ORAI2Q96SN7 254 aa20.8■□□□□ 0.92
SCNN1A-202ENST00000338748 ITPRIPQ8IWB1 547 aa20.79■□□□□ 0.92
SCNN1A-202ENST00000338748 MTHFSDQ2M296 383 aaKnown RBP20.78■□□□□ 0.92
SCNN1A-202ENST00000338748 AAMPQ13685 434 aa20.78■□□□□ 0.92
SCNN1A-202ENST00000338748 KRT24Q2M2I5 525 aa20.78■□□□□ 0.92
SCNN1A-202ENST00000338748 TWISTNBQ3B726 338 aaPredicted RBP20.78■□□□□ 0.92
SCNN1A-202ENST00000338748 LTN1O94822 1766 aa20.77■□□□□ 0.92
SCNN1A-202ENST00000338748 MYT1Q01538 1121 aa20.77■□□□□ 0.92
SCNN1A-202ENST00000338748 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
SCNN1A-202ENST00000338748 MRPL50Q8N5N7 158 aaKnown RBP20.77■□□□□ 0.92
SCNN1A-202ENST00000338748 NFAT5O94916 1531 aa20.77■□□□□ 0.92
SCNN1A-202ENST00000338748 PSME1Q06323 249 aa20.76■□□□□ 0.91
SCNN1A-202ENST00000338748 ZNF428Q96B54 188 aa20.76■□□□□ 0.91
SCNN1A-202ENST00000338748 BRPF1P55201 1214 aaPredicted RBP20.76■□□□□ 0.91
SCNN1A-202ENST00000338748 NPM2Q86SE8 214 aaKnown RBP20.76■□□□□ 0.91
SCNN1A-202ENST00000338748 LTV1Q96GA3 475 aaPredicted RBP20.76■□□□□ 0.91
SCNN1A-202ENST00000338748 CRB1P82279 1406 aa20.75■□□□□ 0.91
SCNN1A-202ENST00000338748 KIF24Q5T7B8 1368 aa20.74■□□□□ 0.91
SCNN1A-202ENST00000338748 C8orf34Q49A92 452 aa20.74■□□□□ 0.91
SCNN1A-202ENST00000338748 IPO8O15397 1037 aaKnown RBP20.74■□□□□ 0.91
SCNN1A-202ENST00000338748 DDX19BQ9UMR2 479 aa20.74■□□□□ 0.91
SCNN1A-202ENST00000338748 CHL1O00533 1208 aa20.73■□□□□ 0.91
SCNN1A-202ENST00000338748 ANP32AP39687 249 aaKnown RBP20.73■□□□□ 0.91
SCNN1A-202ENST00000338748 PROSER2Q86WR7 435 aaPredicted RBP20.73■□□□□ 0.91
SCNN1A-202ENST00000338748 USHBP1Q8N6Y0 703 aa20.72■□□□□ 0.91
SCNN1A-202ENST00000338748 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
SCNN1A-202ENST00000338748 STRCP1A6NGW2 1772 aa20.71■□□□□ 0.91
SCNN1A-202ENST00000338748 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
SCNN1A-202ENST00000338748 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
SCNN1A-202ENST00000338748 RTL1A6NKG5 1358 aa20.7■□□□□ 0.9
SCNN1A-202ENST00000338748 FAM161AQ3B820 660 aa20.69■□□□□ 0.9
SCNN1A-202ENST00000338748 ANP32EQ9BTT0 268 aa20.69■□□□□ 0.9
SCNN1A-202ENST00000338748 RWDD1Q9H446 243 aaPredicted RBP20.69■□□□□ 0.9
SCNN1A-202ENST00000338748 PDZRN3Q9UPQ7 1066 aa20.69■□□□□ 0.9
SCNN1A-202ENST00000338748 C1orf167Q5SNV9 1468 aa20.69■□□□□ 0.9
SCNN1A-202ENST00000338748 ZBTB7CA1YPR0 619 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms