RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 RAB3GAP1Q15042 981 aa14.74□□□□□ -0.05
RBM39-202ENST00000338163 SMC5Q8IY18 1101 aa14.74□□□□□ -0.05
RBM39-202ENST00000338163 TPM2P07951 284 aa14.73□□□□□ -0.05
RBM39-202ENST00000338163 SSFA2P28290 1259 aa14.73□□□□□ -0.05
RBM39-202ENST00000338163 RBM25P49756 843 aaKnown RBP14.73□□□□□ -0.05
RBM39-202ENST00000338163 RBM10P98175 930 aaKnown RBP14.73□□□□□ -0.05
RBM39-202ENST00000338163 DDIT3P35638 169 aa14.73□□□□□ -0.05
RBM39-202ENST00000338163 TBX22Q9Y458 520 aa14.73□□□□□ -0.05
RBM39-202ENST00000338163 ADGRB1O14514 1584 aa14.73□□□□□ -0.05
RBM39-202ENST00000338163 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
RBM39-202ENST00000338163 CCDC27Q2M243 656 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 SNX21Q969T3 373 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 PRAM1Q96QH2 718 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 ARID3AQ99856 593 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 NPHP4O75161 1426 aaPredicted RBP14.72□□□□□ -0.05
RBM39-202ENST00000338163 CCDC173Q0VFZ6 552 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 ANKRD45Q5TZF3 282 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
RBM39-202ENST00000338163 CIZ1Q9ULV3 898 aaPredicted RBP14.72□□□□□ -0.05
RBM39-202ENST00000338163 IQSEC2Q5JU85 1478 aa14.71□□□□□ -0.05
RBM39-202ENST00000338163 SETBP1Q9Y6X0 1596 aa14.71□□□□□ -0.05
RBM39-202ENST00000338163 CHD1LQ86WJ1 897 aa14.71□□□□□ -0.05
RBM39-202ENST00000338163 NRXN3Q9Y4C0 1643 aa14.71□□□□□ -0.05
RBM39-202ENST00000338163 AMOTL2Q9Y2J4 779 aa14.71□□□□□ -0.06
RBM39-202ENST00000338163 NCOA3Q9Y6Q9 1424 aa14.7□□□□□ -0.06
RBM39-202ENST00000338163 KIAA1210Q9ULL0 1709 aa14.7□□□□□ -0.06
RBM39-202ENST00000338163 K7ELQ4 463 aaPredicted RBP14.7□□□□□ -0.06
RBM39-202ENST00000338163 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
RBM39-202ENST00000338163 ZSCAN30Q86W11 494 aa14.7□□□□□ -0.06
RBM39-202ENST00000338163 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
RBM39-202ENST00000338163 NUCB1Q02818 461 aa14.7□□□□□ -0.06
RBM39-202ENST00000338163 GAS2L2Q8NHY3 880 aa14.69□□□□□ -0.06
RBM39-202ENST00000338163 PDCL3Q9H2J4 239 aa14.69□□□□□ -0.06
RBM39-202ENST00000338163 ZBTB40Q9NUA8 1239 aa14.69□□□□□ -0.06
RBM39-202ENST00000338163 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
RBM39-202ENST00000338163 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
RBM39-202ENST00000338163 CAVIN1Q6NZI2 390 aaKnown RBP14.68□□□□□ -0.06
RBM39-202ENST00000338163 PTMSP20962 102 aa14.68□□□□□ -0.06
RBM39-202ENST00000338163 KIF2CQ99661 725 aa14.68□□□□□ -0.06
RBM39-202ENST00000338163 R3HCC1Q9Y3T6 440 aaKnown RBP14.68□□□□□ -0.06
RBM39-202ENST00000338163 MED14O60244 1454 aa14.68□□□□□ -0.06
RBM39-202ENST00000338163 MINK1Q8N4C8 1332 aaPredicted RBP14.67□□□□□ -0.06
RBM39-202ENST00000338163 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
RBM39-202ENST00000338163 KCNA6P17658 529 aa14.67□□□□□ -0.06
RBM39-202ENST00000338163 RBM33Q96EV2 1170 aaKnown RBP14.67□□□□□ -0.06
RBM39-202ENST00000338163 IPO8O15397 1037 aaKnown RBP14.67□□□□□ -0.06
RBM39-202ENST00000338163 TMPOP42166 694 aaKnown RBP14.67□□□□□ -0.06
RBM39-202ENST00000338163 TBC1D9Q6ZT07 1266 aa14.67□□□□□ -0.06
RBM39-202ENST00000338163 ABCC11Q96J66 1382 aa14.66□□□□□ -0.06
RBM39-202ENST00000338163 PTPRUQ92729 1446 aa14.66□□□□□ -0.06
RBM39-202ENST00000338163 BMP2KLQ5H9B9 411 aa14.66□□□□□ -0.06
RBM39-202ENST00000338163 PLEKHG5O94827 1062 aa14.66□□□□□ -0.06
RBM39-202ENST00000338163 BAG4O95429 457 aaKnown RBP14.66□□□□□ -0.06
RBM39-202ENST00000338163 CT47B1P0C2W7 299 aaPredicted RBP14.66□□□□□ -0.06
RBM39-202ENST00000338163 RIPK4P57078 832 aa14.65□□□□□ -0.06
RBM39-202ENST00000338163 CALD1Q05682 793 aaKnown RBP14.65□□□□□ -0.06
RBM39-202ENST00000338163 KLHL40Q2TBA0 621 aa14.65□□□□□ -0.06
RBM39-202ENST00000338163 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.65□□□□□ -0.06
RBM39-202ENST00000338163 KIF16BQ96L93 1317 aa14.65□□□□□ -0.06
RBM39-202ENST00000338163 ROBO2Q9HCK4 1378 aa14.65□□□□□ -0.06
RBM39-202ENST00000338163 PPP1R9BQ96SB3 815 aa14.64□□□□□ -0.07
RBM39-202ENST00000338163 OFD1O75665 1012 aa14.64□□□□□ -0.07
RBM39-202ENST00000338163 XPCQ01831 940 aaPredicted RBP14.64□□□□□ -0.07
RBM39-202ENST00000338163 TRIM35Q9UPQ4 493 aa14.64□□□□□ -0.07
RBM39-202ENST00000338163 ZBTB7CA1YPR0 619 aa14.63□□□□□ -0.07
RBM39-202ENST00000338163 GGNBP2Q9H3C7 697 aa14.63□□□□□ -0.07
RBM39-202ENST00000338163 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
RBM39-202ENST00000338163 ELL2O00472 640 aaPredicted RBP14.62□□□□□ -0.07
RBM39-202ENST00000338163 CABP2Q9NPB3 220 aa14.62□□□□□ -0.07
RBM39-202ENST00000338163 PKP1Q13835 747 aa14.61□□□□□ -0.07
RBM39-202ENST00000338163 ZSCAN23Q3MJ62 389 aa14.61□□□□□ -0.07
RBM39-202ENST00000338163 SRPK2P78362 688 aaKnown RBP14.61□□□□□ -0.07
RBM39-202ENST00000338163 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
RBM39-202ENST00000338163 DIP2AQ14689 1571 aa14.6□□□□□ -0.07
RBM39-202ENST00000338163 FOXD4L5Q5VV16 416 aaPredicted RBP14.6□□□□□ -0.07
RBM39-202ENST00000338163 FOXD4L4Q8WXT5 416 aaPredicted RBP14.6□□□□□ -0.07
RBM39-202ENST00000338163 C14orf37Q86TY3 774 aa14.6□□□□□ -0.07
RBM39-202ENST00000338163 NUTM2FA1L443 756 aa14.59□□□□□ -0.07
RBM39-202ENST00000338163 RBSNQ9H1K0 784 aa14.59□□□□□ -0.07
RBM39-202ENST00000338163 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
RBM39-202ENST00000338163 EVC2Q86UK5 1308 aa14.59□□□□□ -0.07
RBM39-202ENST00000338163 TECPR2O15040 1411 aa14.59□□□□□ -0.07
RBM39-202ENST00000338163 PRPF40AO75400 957 aaKnown RBP14.59□□□□□ -0.07
RBM39-202ENST00000338163 PROSER2Q86WR7 435 aaPredicted RBP14.59□□□□□ -0.07
RBM39-202ENST00000338163 SBNO2Q9Y2G9 1366 aa14.59□□□□□ -0.07
RBM39-202ENST00000338163 UQCRHLA0A096LP55 91 aa14.58□□□□□ -0.07
RBM39-202ENST00000338163 CDC45O75419 566 aa14.58□□□□□ -0.07
RBM39-202ENST00000338163 UQCRHP07919 91 aa14.58□□□□□ -0.07
RBM39-202ENST00000338163 PRIM1P49642 420 aaKnown RBP14.58□□□□□ -0.07
RBM39-202ENST00000338163 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.07
RBM39-202ENST00000338163 ARHGEF28Q8N1W1 1705 aaKnown RBP14.58□□□□□ -0.08
RBM39-202ENST00000338163 SIRT1Q96EB6 747 aa14.58□□□□□ -0.08
RBM39-202ENST00000338163 CHAMP1Q96JM3 812 aa14.58□□□□□ -0.08
RBM39-202ENST00000338163 GCC1Q96CN9 775 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 CDK19Q9BWU1 502 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 FAM135BQ49AJ0 1406 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 ZNF335Q9H4Z2 1342 aaPredicted RBP14.57□□□□□ -0.08
RBM39-202ENST00000338163 STRCQ7RTU9 1775 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 APBB1O00213 710 aa14.57□□□□□ -0.08
RBM39-202ENST00000338163 RNF214Q8ND24 703 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms