RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 NEFMP07197 916 aa11.87□□□□□ -0.51
CLDN2-201ENST00000336803 PODXL2Q9NZ53 605 aa11.87□□□□□ -0.51
CLDN2-201ENST00000336803 NWD1Q149M9 1564 aa11.87□□□□□ -0.51
CLDN2-201ENST00000336803 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
CLDN2-201ENST00000336803 PHACTR3Q96KR7 559 aa11.86□□□□□ -0.51
CLDN2-201ENST00000336803 PLEKHG5O94827 1062 aa11.86□□□□□ -0.51
CLDN2-201ENST00000336803 BRPF1P55201 1214 aaPredicted RBP11.86□□□□□ -0.51
CLDN2-201ENST00000336803 DNAJC5Q9H3Z4 198 aa11.86□□□□□ -0.51
CLDN2-201ENST00000336803 MSH5O43196 834 aa11.85□□□□□ -0.51
CLDN2-201ENST00000336803 EXOSC9Q06265 439 aaKnown RBP11.85□□□□□ -0.51
CLDN2-201ENST00000336803 ZNF428Q96B54 188 aa11.85□□□□□ -0.51
CLDN2-201ENST00000336803 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
CLDN2-201ENST00000336803 ZNF853P0CG23 659 aa11.85□□□□□ -0.51
CLDN2-201ENST00000336803 EIF4A2Q14240 407 aaKnown RBP11.85□□□□□ -0.51
CLDN2-201ENST00000336803 TSR2Q969E8 191 aaKnown RBP11.85□□□□□ -0.51
CLDN2-201ENST00000336803 LMOD3Q0VAK6 560 aa11.85□□□□□ -0.51
CLDN2-201ENST00000336803 HMOX1P09601 288 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 ALDH1L2Q3SY69 923 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 NPHP4O75161 1426 aaPredicted RBP11.84□□□□□ -0.51
CLDN2-201ENST00000336803 SBNO1A3KN83 1393 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 NUTM2FA1L443 756 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 PANK1Q8TE04 598 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 IFT57Q9NWB7 429 aa11.84□□□□□ -0.51
CLDN2-201ENST00000336803 ARHGEF10O15013 1369 aa11.83□□□□□ -0.51
CLDN2-201ENST00000336803 ADGRL3Q9HAR2 1447 aa11.83□□□□□ -0.52
CLDN2-201ENST00000336803 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
CLDN2-201ENST00000336803 NGDNQ8NEJ9 315 aaKnown RBP11.83□□□□□ -0.52
CLDN2-201ENST00000336803 PMFBP1Q8TBY8 1022 aa11.83□□□□□ -0.52
CLDN2-201ENST00000336803 RLBP1P12271 317 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 ZKSCAN2Q63HK3 967 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 FLT4P35916 1363 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 BACH2Q9BYV9 841 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 COG6Q9Y2V7 657 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 GNAI1P63096 354 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 SSH1Q8WYL5 1049 aa11.82□□□□□ -0.52
CLDN2-201ENST00000336803 FRAT1Q92837 279 aaPredicted RBP11.82□□□□□ -0.52
CLDN2-201ENST00000336803 PDE4AP27815 886 aa11.81□□□□□ -0.52
CLDN2-201ENST00000336803 MAP3K19Q56UN5 1328 aa11.81□□□□□ -0.52
CLDN2-201ENST00000336803 KDRP35968 1356 aa11.81□□□□□ -0.52
CLDN2-201ENST00000336803 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
CLDN2-201ENST00000336803 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
CLDN2-201ENST00000336803 DZIP1LQ8IYY4 767 aaKnown RBP11.8□□□□□ -0.52
CLDN2-201ENST00000336803 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
CLDN2-201ENST00000336803 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 IGHDP01880 384 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 HSP90AB2PQ58FF8 381 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 SMC4Q9NTJ3 1288 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 BCL2L13Q9BXK5 485 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 ATF7IPQ6VMQ6 1270 aa11.79□□□□□ -0.52
CLDN2-201ENST00000336803 TRIM27P14373 513 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 SULT6B1Q6IMI4 303 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 PHF8Q9UPP1 1060 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 RTL1A6NKG5 1358 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 IGSF1Q8N6C5 1336 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 VAMP4O75379 141 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 ARHGAP45Q92619 1136 aa11.78□□□□□ -0.52
CLDN2-201ENST00000336803 NFAT5O94916 1531 aa11.77□□□□□ -0.52
CLDN2-201ENST00000336803 IPO8O15397 1037 aaKnown RBP11.77□□□□□ -0.52
CLDN2-201ENST00000336803 AEBP1Q8IUX7 1158 aa11.77□□□□□ -0.52
CLDN2-201ENST00000336803 MBIPQ9NS73 344 aa11.77□□□□□ -0.52
CLDN2-201ENST00000336803 NOB1Q9ULX3 412 aaKnown RBP11.77□□□□□ -0.53
CLDN2-201ENST00000336803 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
CLDN2-201ENST00000336803 VIRMAQ69YN4 1812 aaKnown RBP11.76□□□□□ -0.53
CLDN2-201ENST00000336803 LTN1O94822 1766 aa11.76□□□□□ -0.53
CLDN2-201ENST00000336803 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
CLDN2-201ENST00000336803 NLRP6P59044 892 aa11.76□□□□□ -0.53
CLDN2-201ENST00000336803 THUMPD2Q9BTF0 503 aaKnown RBP11.76□□□□□ -0.53
CLDN2-201ENST00000336803 DDX19BQ9UMR2 479 aa11.76□□□□□ -0.53
CLDN2-201ENST00000336803 CRB1P82279 1406 aa11.75□□□□□ -0.53
CLDN2-201ENST00000336803 FTSJ3Q8IY81 847 aaKnown RBP11.75□□□□□ -0.53
CLDN2-201ENST00000336803 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
CLDN2-201ENST00000336803 KIF1AQ12756 1690 aa11.75□□□□□ -0.53
CLDN2-201ENST00000336803 MST1RQ04912 1400 aa11.75□□□□□ -0.53
CLDN2-201ENST00000336803 KIAA0232Q92628 1395 aa11.75□□□□□ -0.53
CLDN2-201ENST00000336803 TRPM3Q9HCF6 1732 aaPredicted RBP11.75□□□□□ -0.53
CLDN2-201ENST00000336803 CHL1O00533 1208 aa11.74□□□□□ -0.53
CLDN2-201ENST00000336803 HOXC9P31274 260 aa11.74□□□□□ -0.53
CLDN2-201ENST00000336803 SKAP1Q86WV1 359 aa11.74□□□□□ -0.53
CLDN2-201ENST00000336803 KCNA4P22459 653 aa11.74□□□□□ -0.53
CLDN2-201ENST00000336803 AMPHP49418 695 aa11.74□□□□□ -0.53
CLDN2-201ENST00000336803 RWDD1Q9H446 243 aaPredicted RBP11.74□□□□□ -0.53
CLDN2-201ENST00000336803 SLIT3O75094 1523 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 ABTB2Q8N961 1025 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 EYA1Q99502 592 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.73□□□□□ -0.53
CLDN2-201ENST00000336803 FAM83GA6ND36 823 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 HTATSF1O43719 755 aaKnown RBP11.73□□□□□ -0.53
CLDN2-201ENST00000336803 HDAC1Q13547 482 aaPredicted RBP11.73□□□□□ -0.53
CLDN2-201ENST00000336803 FAM161AQ3B820 660 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 TSPYL6Q8N831 410 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 LAS1LQ9Y4W2 734 aaKnown RBP11.73□□□□□ -0.53
CLDN2-201ENST00000336803 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
CLDN2-201ENST00000336803 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
CLDN2-201ENST00000336803 TWISTNBQ3B726 338 aaPredicted RBP11.72□□□□□ -0.53
CLDN2-201ENST00000336803 C8orf34Q49A92 452 aa11.72□□□□□ -0.53
CLDN2-201ENST00000336803 TMEM57Q8N5G2 664 aa11.72□□□□□ -0.53
CLDN2-201ENST00000336803 IPO9Q96P70 1041 aaKnown RBP11.72□□□□□ -0.53
CLDN2-201ENST00000336803 ZBTB40Q9NUA8 1239 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms