RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 MAP3K19Q56UN5 1328 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 TECPR2O15040 1411 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 ABTB2Q8N961 1025 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 TRIM27P14373 513 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 KIF20BQ96Q89 1820 aa16.16■□□□□ 0.18
LIMK1-201ENST00000336180 CENPQQ7L2Z9 268 aaPredicted RBP16.15■□□□□ 0.18
LIMK1-201ENST00000336180 NGEFQ8N5V2 710 aa16.15■□□□□ 0.18
LIMK1-201ENST00000336180 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
LIMK1-201ENST00000336180 RIMS1Q86UR5 1692 aaKnown RBP16.14■□□□□ 0.17
LIMK1-201ENST00000336180 PLEKHG3A1L390 1219 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 ZKSCAN2Q63HK3 967 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 MBIPQ9NS73 344 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 SLC4A3P48751 1232 aa16.14■□□□□ 0.17
LIMK1-201ENST00000336180 C8orf58Q8NAV2 365 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 USP6P35125 1406 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 ANP32AP39687 249 aaKnown RBP16.13■□□□□ 0.17
LIMK1-201ENST00000336180 DZIP1LQ8IYY4 767 aaKnown RBP16.13■□□□□ 0.17
LIMK1-201ENST00000336180 ORAI2Q96SN7 254 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 TMEM57Q8N5G2 664 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 DDX17Q92841 729 aaKnown RBP16.13■□□□□ 0.17
LIMK1-201ENST00000336180 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
LIMK1-201ENST00000336180 HSPA2P54652 639 aa16.12■□□□□ 0.17
LIMK1-201ENST00000336180 MED14O60244 1454 aa16.12■□□□□ 0.17
LIMK1-201ENST00000336180 NBR1Q14596 966 aa16.12■□□□□ 0.17
LIMK1-201ENST00000336180 NECTIN2Q92692 538 aa16.12■□□□□ 0.17
LIMK1-201ENST00000336180 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.12■□□□□ 0.17
LIMK1-201ENST00000336180 RGPD8O14715 1765 aaPredicted RBP16.11■□□□□ 0.17
LIMK1-201ENST00000336180 PNNQ9H307 717 aaKnown RBP16.1■□□□□ 0.17
LIMK1-201ENST00000336180 MVPQ14764 893 aaKnown RBP16.09■□□□□ 0.17
LIMK1-201ENST00000336180 ARHGAP23Q9P227 1491 aa16.09■□□□□ 0.17
LIMK1-201ENST00000336180 ANKRD26Q9UPS8 1709 aa16.08■□□□□ 0.17
LIMK1-201ENST00000336180 PSME1Q06323 249 aa16.08■□□□□ 0.17
LIMK1-201ENST00000336180 ADGRB2O60241 1585 aa16.08■□□□□ 0.17
LIMK1-201ENST00000336180 ATF7IPQ6VMQ6 1270 aa16.08■□□□□ 0.16
LIMK1-201ENST00000336180 EYA1Q99502 592 aa16.08■□□□□ 0.16
LIMK1-201ENST00000336180 PHF8Q9UPP1 1060 aa16.08■□□□□ 0.16
LIMK1-201ENST00000336180 SLIT1O75093 1534 aa16.07■□□□□ 0.16
LIMK1-201ENST00000336180 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
LIMK1-201ENST00000336180 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
LIMK1-201ENST00000336180 VAMP4O75379 141 aa16.06■□□□□ 0.16
LIMK1-201ENST00000336180 DIP2AQ14689 1571 aa16.06■□□□□ 0.16
LIMK1-201ENST00000336180 CEP170BQ9Y4F5 1589 aaPredicted RBP16.06■□□□□ 0.16
LIMK1-201ENST00000336180 PDZRN3Q9UPQ7 1066 aa16.06■□□□□ 0.16
LIMK1-201ENST00000336180 SETD1BQ9UPS6 1966 aaKnown RBP16.06■□□□□ 0.16
LIMK1-201ENST00000336180 NOP58Q9Y2X3 529 aaKnown RBP16.06■□□□□ 0.16
LIMK1-201ENST00000336180 ITSN1Q15811 1721 aa16.05■□□□□ 0.16
LIMK1-201ENST00000336180 AEBP2Q6ZN18 517 aaPredicted RBP16.05■□□□□ 0.16
LIMK1-201ENST00000336180 AATKQ6ZMQ8 1374 aa16.05■□□□□ 0.16
LIMK1-201ENST00000336180 OVOS2A0A0J9YW53 1432 aa16.05■□□□□ 0.16
LIMK1-201ENST00000336180 OVOS2Q6IE36 1432 aa16.05■□□□□ 0.16
LIMK1-201ENST00000336180 CDK12Q9NYV4 1490 aaPredicted RBP16.04■□□□□ 0.16
LIMK1-201ENST00000336180 SEC24BO95487 1268 aa16.04■□□□□ 0.16
LIMK1-201ENST00000336180 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
LIMK1-201ENST00000336180 LRRC59Q96AG4 307 aaKnown RBP16.04■□□□□ 0.16
LIMK1-201ENST00000336180 KNDC1Q76NI1 1749 aa16.04■□□□□ 0.16
LIMK1-201ENST00000336180 GNAI1P63096 354 aa16.04■□□□□ 0.16
LIMK1-201ENST00000336180 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
LIMK1-201ENST00000336180 IPO9Q96P70 1041 aaKnown RBP16.03■□□□□ 0.16
LIMK1-201ENST00000336180 ZBTB47Q9UFB7 747 aaPredicted RBP16.03■□□□□ 0.16
LIMK1-201ENST00000336180 MON2Q7Z3U7 1717 aa16.03■□□□□ 0.16
LIMK1-201ENST00000336180 ZNF428Q96B54 188 aa16.02■□□□□ 0.16
LIMK1-201ENST00000336180 HOXC9P31274 260 aa16.01■□□□□ 0.15
LIMK1-201ENST00000336180 DNAJC5Q9H3Z4 198 aa16.01■□□□□ 0.15
LIMK1-201ENST00000336180 APBB1O00213 710 aa16.01■□□□□ 0.15
LIMK1-201ENST00000336180 MS4A1P11836 297 aa16.01■□□□□ 0.15
LIMK1-201ENST00000336180 MRPL50Q8N5N7 158 aaKnown RBP16.01■□□□□ 0.15
LIMK1-201ENST00000336180 CFAP44Q96MT7 982 aa16.01■□□□□ 0.15
LIMK1-201ENST00000336180 IL16Q14005 1332 aa16■□□□□ 0.15
LIMK1-201ENST00000336180 PEAK1Q9H792 1746 aa16■□□□□ 0.15
LIMK1-201ENST00000336180 IFT57Q9NWB7 429 aa16■□□□□ 0.15
LIMK1-201ENST00000336180 AKAP12Q02952 1782 aa16■□□□□ 0.15
LIMK1-201ENST00000336180 PTCH1Q13635 1447 aa16■□□□□ 0.15
LIMK1-201ENST00000336180 RTF1Q92541 710 aaKnown RBP16■□□□□ 0.15
LIMK1-201ENST00000336180 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
LIMK1-201ENST00000336180 FAM161AQ3B820 660 aa15.99■□□□□ 0.15
LIMK1-201ENST00000336180 CABLES1Q8TDN4 633 aa15.99■□□□□ 0.15
LIMK1-201ENST00000336180 SSH2Q76I76 1423 aa15.99■□□□□ 0.15
LIMK1-201ENST00000336180 TSPYL4Q9UJ04 414 aa15.98■□□□□ 0.15
LIMK1-201ENST00000336180 TTC21AQ8NDW8 1320 aa15.98■□□□□ 0.15
LIMK1-201ENST00000336180 ZNF853P0CG23 659 aa15.98■□□□□ 0.15
LIMK1-201ENST00000336180 LNPKQ9C0E8 428 aa15.98■□□□□ 0.15
LIMK1-201ENST00000336180 SLC4A10Q6U841 1118 aa15.98■□□□□ 0.15
LIMK1-201ENST00000336180 RWDD1Q9H446 243 aaPredicted RBP15.98■□□□□ 0.15
LIMK1-201ENST00000336180 F6X3S4 739 aa15.97■□□□□ 0.15
LIMK1-201ENST00000336180 FLT4P35916 1363 aa15.97■□□□□ 0.15
LIMK1-201ENST00000336180 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.15
LIMK1-201ENST00000336180 G2E3Q7L622 706 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 LMOD3Q0VAK6 560 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 NBPF6Q5VWK0 638 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 NBPF4Q96M43 638 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 DDX19BQ9UMR2 479 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 KIF16BQ96L93 1317 aa15.96■□□□□ 0.15
LIMK1-201ENST00000336180 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
LIMK1-201ENST00000336180 SBNO1A3KN83 1393 aa15.95■□□□□ 0.14
LIMK1-201ENST00000336180 NPHP4O75161 1426 aaPredicted RBP15.95■□□□□ 0.14
LIMK1-201ENST00000336180 CALD1Q05682 793 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms