RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 KIF20BQ96Q89 1820 aa23.16■■□□□ 1.3
LYSMD4-201ENST00000332728 ATP7BP35670 1465 aa23.15■■□□□ 1.3
LYSMD4-201ENST00000332728 ADGRB2O60241 1585 aa23.15■■□□□ 1.3
LYSMD4-201ENST00000332728 PNNQ9H307 717 aaKnown RBP23.14■■□□□ 1.3
LYSMD4-201ENST00000332728 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
LYSMD4-201ENST00000332728 RTL5Q5HYW3 569 aaPredicted RBP23.13■■□□□ 1.29
LYSMD4-201ENST00000332728 KCNA6P17658 529 aa23.13■■□□□ 1.29
LYSMD4-201ENST00000332728 DLC1Q96QB1 1528 aa23.12■■□□□ 1.29
LYSMD4-201ENST00000332728 FAM135BQ49AJ0 1406 aa23.12■■□□□ 1.29
LYSMD4-201ENST00000332728 DEKP35659 375 aaKnown RBP23.12■■□□□ 1.29
LYSMD4-201ENST00000332728 SPRYD3Q8NCJ5 442 aa23.11■■□□□ 1.29
LYSMD4-201ENST00000332728 VAMP4O75379 141 aa23.11■■□□□ 1.29
LYSMD4-201ENST00000332728 MED14O60244 1454 aa23.1■■□□□ 1.29
LYSMD4-201ENST00000332728 TWISTNBQ3B726 338 aaPredicted RBP23.1■■□□□ 1.29
LYSMD4-201ENST00000332728 ZNF692Q9BU19 519 aaPredicted RBP23.1■■□□□ 1.29
LYSMD4-201ENST00000332728 LNPKQ9C0E8 428 aa23.09■■□□□ 1.29
LYSMD4-201ENST00000332728 NECTIN2Q92692 538 aa23.09■■□□□ 1.29
LYSMD4-201ENST00000332728 ANKRD26Q9UPS8 1709 aa23.08■■□□□ 1.29
LYSMD4-201ENST00000332728 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
LYSMD4-201ENST00000332728 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.08■■□□□ 1.28
LYSMD4-201ENST00000332728 NLRP6P59044 892 aa23.08■■□□□ 1.28
LYSMD4-201ENST00000332728 XPCQ01831 940 aaPredicted RBP23.07■■□□□ 1.28
LYSMD4-201ENST00000332728 DDX19BQ9UMR2 479 aa23.07■■□□□ 1.28
LYSMD4-201ENST00000332728 AMPHP49418 695 aa23.07■■□□□ 1.28
LYSMD4-201ENST00000332728 USHBP1Q8N6Y0 703 aa23.06■■□□□ 1.28
LYSMD4-201ENST00000332728 MAP3K19Q56UN5 1328 aa23.06■■□□□ 1.28
LYSMD4-201ENST00000332728 APBB1O00213 710 aa23.05■■□□□ 1.28
LYSMD4-201ENST00000332728 GNAI1P63096 354 aa23.05■■□□□ 1.28
LYSMD4-201ENST00000332728 IL16Q14005 1332 aa23.05■■□□□ 1.28
LYSMD4-201ENST00000332728 PLEKHG1Q9ULL1 1385 aa23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 THEMISQ8N1K5 641 aaPredicted RBP23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 IPO8O15397 1037 aaKnown RBP23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 MRPL50Q8N5N7 158 aaKnown RBP23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 DDRGK1Q96HY6 314 aa23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 USP19O94966 1318 aa23.04■■□□□ 1.28
LYSMD4-201ENST00000332728 MFAP1P55081 439 aaKnown RBP23.03■■□□□ 1.28
LYSMD4-201ENST00000332728 SLKQ9H2G2 1235 aaPredicted RBP23.03■■□□□ 1.28
LYSMD4-201ENST00000332728 ZBTB40Q9NUA8 1239 aa23.03■■□□□ 1.28
LYSMD4-201ENST00000332728 KIF16BQ96L93 1317 aa23.02■■□□□ 1.28
LYSMD4-201ENST00000332728 LMOD2Q6P5Q4 547 aa23.01■■□□□ 1.27
LYSMD4-201ENST00000332728 IFT57Q9NWB7 429 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 CT47B1P0C2W7 299 aaPredicted RBP23■■□□□ 1.27
LYSMD4-201ENST00000332728 CFAP44Q96MT7 982 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 TECPR2O15040 1411 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 USP6P35125 1406 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 PLEKHG3A1L390 1219 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 ABTB2Q8N961 1025 aa23■■□□□ 1.27
LYSMD4-201ENST00000332728 ANKRD45Q5TZF3 282 aa22.99■■□□□ 1.27
LYSMD4-201ENST00000332728 MTHFSDQ2M296 383 aaKnown RBP22.98■■□□□ 1.27
LYSMD4-201ENST00000332728 CDK12Q9NYV4 1490 aaPredicted RBP22.98■■□□□ 1.27
LYSMD4-201ENST00000332728 SIRT1Q96EB6 747 aa22.98■■□□□ 1.27
LYSMD4-201ENST00000332728 AATKQ6ZMQ8 1374 aa22.97■■□□□ 1.27
LYSMD4-201ENST00000332728 ZNF853P0CG23 659 aa22.96■■□□□ 1.27
LYSMD4-201ENST00000332728 EYA1Q99502 592 aa22.96■■□□□ 1.27
LYSMD4-201ENST00000332728 TBX22Q9Y458 520 aa22.96■■□□□ 1.27
LYSMD4-201ENST00000332728 SETD1BQ9UPS6 1966 aaKnown RBP22.96■■□□□ 1.27
LYSMD4-201ENST00000332728 ALDH1L2Q3SY69 923 aa22.95■■□□□ 1.27
LYSMD4-201ENST00000332728 SLC4A10Q6U841 1118 aa22.95■■□□□ 1.26
LYSMD4-201ENST00000332728 RGPD8O14715 1765 aaPredicted RBP22.95■■□□□ 1.26
LYSMD4-201ENST00000332728 ZBTB7BO15156 539 aaPredicted RBP22.94■■□□□ 1.26
LYSMD4-201ENST00000332728 F6X3S4 739 aa22.94■■□□□ 1.26
LYSMD4-201ENST00000332728 CALD1Q05682 793 aaKnown RBP22.94■■□□□ 1.26
LYSMD4-201ENST00000332728 ITSN1Q15811 1721 aa22.93■■□□□ 1.26
LYSMD4-201ENST00000332728 C3P01024 1663 aa22.93■■□□□ 1.26
LYSMD4-201ENST00000332728 NCBP3Q53F19 620 aaKnown RBP22.93■■□□□ 1.26
LYSMD4-201ENST00000332728 LMOD3Q0VAK6 560 aa22.92■■□□□ 1.26
LYSMD4-201ENST00000332728 ESCO1Q5FWF5 840 aa22.92■■□□□ 1.26
LYSMD4-201ENST00000332728 SIRT2Q8IXJ6 389 aa22.92■■□□□ 1.26
LYSMD4-201ENST00000332728 DLG5Q8TDM6 1919 aa22.92■■□□□ 1.26
LYSMD4-201ENST00000332728 RTF1Q92541 710 aaKnown RBP22.91■■□□□ 1.26
LYSMD4-201ENST00000332728 NFKBIBQ15653 356 aa22.91■■□□□ 1.26
LYSMD4-201ENST00000332728 G2E3Q7L622 706 aa22.91■■□□□ 1.26
LYSMD4-201ENST00000332728 TSPYL4Q9UJ04 414 aa22.91■■□□□ 1.26
LYSMD4-201ENST00000332728 OVOS2A0A0J9YW53 1432 aa22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 OVOS2Q6IE36 1432 aa22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 MON2Q7Z3U7 1717 aa22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 FRAT2O75474 233 aaPredicted RBP22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 SLC4A2P04920 1241 aa22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 HDAC1Q13547 482 aaPredicted RBP22.9■■□□□ 1.26
LYSMD4-201ENST00000332728 ZNF428Q96B54 188 aa22.89■■□□□ 1.26
LYSMD4-201ENST00000332728 UPF2Q9HAU5 1272 aaKnown RBP22.89■■□□□ 1.25
LYSMD4-201ENST00000332728 PEAK1Q9H792 1746 aa22.87■■□□□ 1.25
LYSMD4-201ENST00000332728 CHD1LQ86WJ1 897 aa22.87■■□□□ 1.25
LYSMD4-201ENST00000332728 C16orf71Q8IYS4 520 aaPredicted RBP22.87■■□□□ 1.25
LYSMD4-201ENST00000332728 SMC5Q8IY18 1101 aa22.87■■□□□ 1.25
LYSMD4-201ENST00000332728 AKAP12Q02952 1782 aa22.86■■□□□ 1.25
LYSMD4-201ENST00000332728 SMARCA5O60264 1052 aaPredicted RBP22.86■■□□□ 1.25
LYSMD4-201ENST00000332728 FER1L4A9Z1Z3 1794 aa22.85■■□□□ 1.25
LYSMD4-201ENST00000332728 KNDC1Q76NI1 1749 aa22.85■■□□□ 1.25
LYSMD4-201ENST00000332728 ORAI2Q96SN7 254 aa22.85■■□□□ 1.25
LYSMD4-201ENST00000332728 CHL1O00533 1208 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 AAMPQ13685 434 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 HOXC9P31274 260 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 NUCB1Q02818 461 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 PSME1Q06323 249 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 MEIS3Q99687 375 aa22.84■■□□□ 1.25
LYSMD4-201ENST00000332728 ANKLE2Q86XL3 938 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms