RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SOGA3Q5TF21 947 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 RAI14Q9P0K7 980 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 SMG6Q86US8 1419 aaKnown RBP12.54□□□□□ -0.4
CLN8-201ENST00000331222 BCAR3O75815 825 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 PRKAR2BP31323 418 aa12.54□□□□□ -0.4
CLN8-201ENST00000331222 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
CLN8-201ENST00000331222 LRRFIP2Q9Y608 721 aaKnown RBP12.54□□□□□ -0.4
CLN8-201ENST00000331222 CDC45O75419 566 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 ADAMTS2O95450 1211 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 PRAM1Q96QH2 718 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 PRKRIP1Q9H875 184 aaPredicted RBP12.53□□□□□ -0.4
CLN8-201ENST00000331222 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
CLN8-201ENST00000331222 TMX1Q9H3N1 280 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.53□□□□□ -0.4
CLN8-201ENST00000331222 LRP2BPQ9P2M1 347 aa12.53□□□□□ -0.4
CLN8-201ENST00000331222 RRS1Q15050 365 aaKnown RBP12.52□□□□□ -0.4
CLN8-201ENST00000331222 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.4
CLN8-201ENST00000331222 ZC3H6P61129 1189 aaKnown RBP12.52□□□□□ -0.4
CLN8-201ENST00000331222 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
CLN8-201ENST00000331222 ERC1Q8IUD2 1116 aa12.52□□□□□ -0.41
CLN8-201ENST00000331222 CDCA7LQ96GN5 454 aa12.52□□□□□ -0.41
CLN8-201ENST00000331222 ZNHIT6Q9NWK9 470 aaKnown RBP12.52□□□□□ -0.41
CLN8-201ENST00000331222 C11orf95C9JLR9 678 aaPredicted RBP12.52□□□□□ -0.41
CLN8-201ENST00000331222 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.41
CLN8-201ENST00000331222 TNNT1P13805 278 aa12.52□□□□□ -0.41
CLN8-201ENST00000331222 ZRSR2Q15696 482 aaKnown RBP12.52□□□□□ -0.41
CLN8-201ENST00000331222 HDGFL1Q5TGJ6 251 aa12.52□□□□□ -0.41
CLN8-201ENST00000331222 DNA2P51530 1060 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 PTPRGP23470 1445 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 ERLIN2O94905 339 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 BTBD11A6QL63 1104 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 GNAI2P04899 355 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.51□□□□□ -0.41
CLN8-201ENST00000331222 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
CLN8-201ENST00000331222 PTCD1O75127 700 aaKnown RBP12.5□□□□□ -0.41
CLN8-201ENST00000331222 IDH1O75874 414 aaKnown RBP12.5□□□□□ -0.41
CLN8-201ENST00000331222 AACSQ86V21 672 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 PPFIBP1Q86W92 1011 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 ANKIB1Q9P2G1 1089 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 ADAMTS8Q9UP79 889 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 MINDY4BA8MYZ0 360 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 CCDC82Q8N4S0 544 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 GOLGA6L10A6NI86 522 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 EXOSC9Q06265 439 aaKnown RBP12.5□□□□□ -0.41
CLN8-201ENST00000331222 RAPGEF2Q9Y4G8 1499 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 GBP2P32456 591 aaPredicted RBP12.5□□□□□ -0.41
CLN8-201ENST00000331222 DDX11Q96FC9 970 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 ARHGAP5Q13017 1502 aa12.5□□□□□ -0.41
CLN8-201ENST00000331222 ZNF396Q96N95 335 aaPredicted RBP12.49□□□□□ -0.41
CLN8-201ENST00000331222 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
CLN8-201ENST00000331222 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
CLN8-201ENST00000331222 CCDC39Q9UFE4 941 aa12.49□□□□□ -0.41
CLN8-201ENST00000331222 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
CLN8-201ENST00000331222 CCDC113Q9H0I3 377 aa12.49□□□□□ -0.41
CLN8-201ENST00000331222 TNMDQ9H2S6 317 aa12.49□□□□□ -0.41
CLN8-201ENST00000331222 ZBED9Q6R2W3 1325 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 STIM1Q13586 685 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 TRIM22Q8IYM9 498 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 SLC26A8Q96RN1 970 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 CDK19Q9BWU1 502 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
CLN8-201ENST00000331222 IL1RAPL2Q9NP60 686 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 NACAP1Q9BZK3 213 aa12.48□□□□□ -0.41
CLN8-201ENST00000331222 TRAK2O60296 914 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 CNTLNQ9NXG0 1405 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 CAMK4Q16566 473 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 CRACR2BQ8N4Y2 399 aaPredicted RBP12.47□□□□□ -0.41
CLN8-201ENST00000331222 GAS2L2Q8NHY3 880 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 UBAC1Q9BSL1 405 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 POLR3DP05423 398 aaPredicted RBP12.47□□□□□ -0.41
CLN8-201ENST00000331222 ANAPC15P60006 121 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 GUCY1B3Q02153 619 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 KIAA1328Q86T90 577 aa12.47□□□□□ -0.41
CLN8-201ENST00000331222 HMGN5P82970 282 aaKnown RBP12.46□□□□□ -0.41
CLN8-201ENST00000331222 LEKR1Q6ZMV7 388 aa12.46□□□□□ -0.41
CLN8-201ENST00000331222 USHBP1Q8N6Y0 703 aa12.46□□□□□ -0.41
CLN8-201ENST00000331222 ERCC4Q92889 916 aaPredicted RBP12.46□□□□□ -0.41
CLN8-201ENST00000331222 GOPCQ9HD26 462 aa12.46□□□□□ -0.41
CLN8-201ENST00000331222 CYP46A1Q9Y6A2 500 aa12.46□□□□□ -0.41
CLN8-201ENST00000331222 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.42
CLN8-201ENST00000331222 CFAP70Q5T0N1 1121 aa12.46□□□□□ -0.42
CLN8-201ENST00000331222 LARP6Q9BRS8 491 aaKnown RBP12.46□□□□□ -0.42
CLN8-201ENST00000331222 PRDM11Q9NQV5 511 aa12.46□□□□□ -0.42
CLN8-201ENST00000331222 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.42
CLN8-201ENST00000331222 KLHL10Q6JEL2 608 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 ANKRD18AQ8IVF6 992 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 LRRCC1Q9C099 1032 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 GOLGA6L10A0A0M3HER8 536 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 ZPR1O75312 459 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 NUTM1Q86Y26 1132 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 MPRIPQ6WCQ1 1025 aa12.45□□□□□ -0.42
CLN8-201ENST00000331222 CTNNBL1Q8WYA6 563 aaPredicted RBP12.44□□□□□ -0.42
CLN8-201ENST00000331222 MACROD2A1Z1Q3 448 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 ERICH4A6NGS2 130 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 GNAI3P08754 354 aa12.44□□□□□ -0.42
CLN8-201ENST00000331222 LARP1BQ659C4 914 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms