RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 PAK3O75914 559 aaPredicted RBP19.37■□□□□ 0.69
TPM3-205ENST00000328159 ABTB2Q8N961 1025 aa19.37■□□□□ 0.69
TPM3-205ENST00000328159 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
TPM3-205ENST00000328159 RARSP54136 660 aaKnown RBP19.37■□□□□ 0.69
TPM3-205ENST00000328159 NUTM2GQ5VZR2 741 aa19.36■□□□□ 0.69
TPM3-205ENST00000328159 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
TPM3-205ENST00000328159 CT47B1P0C2W7 299 aaPredicted RBP19.35■□□□□ 0.69
TPM3-205ENST00000328159 STRCP1A6NGW2 1772 aa19.35■□□□□ 0.69
TPM3-205ENST00000328159 AMPHP49418 695 aa19.34■□□□□ 0.69
TPM3-205ENST00000328159 PSME1Q06323 249 aa19.34■□□□□ 0.69
TPM3-205ENST00000328159 SULT6B1Q6IMI4 303 aa19.34■□□□□ 0.69
TPM3-205ENST00000328159 AEBP1Q8IUX7 1158 aa19.34■□□□□ 0.69
TPM3-205ENST00000328159 KIF24Q5T7B8 1368 aa19.34■□□□□ 0.69
TPM3-205ENST00000328159 ARHGEF10O15013 1369 aa19.33■□□□□ 0.68
TPM3-205ENST00000328159 HSPA2P54652 639 aa19.32■□□□□ 0.68
TPM3-205ENST00000328159 EXOSC9Q06265 439 aaKnown RBP19.32■□□□□ 0.68
TPM3-205ENST00000328159 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
TPM3-205ENST00000328159 CALD1Q05682 793 aaKnown RBP19.32■□□□□ 0.68
TPM3-205ENST00000328159 LMOD3Q0VAK6 560 aa19.32■□□□□ 0.68
TPM3-205ENST00000328159 PDE3AQ14432 1141 aa19.32■□□□□ 0.68
TPM3-205ENST00000328159 ORAI2Q96SN7 254 aa19.32■□□□□ 0.68
TPM3-205ENST00000328159 KIF1AQ12756 1690 aa19.31■□□□□ 0.68
TPM3-205ENST00000328159 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
TPM3-205ENST00000328159 KDM4FA0A1W2PPD8 638 aa19.3■□□□□ 0.68
TPM3-205ENST00000328159 C1orf167Q5SNV9 1468 aa19.3■□□□□ 0.68
TPM3-205ENST00000328159 LTN1O94822 1766 aa19.29■□□□□ 0.68
TPM3-205ENST00000328159 TMEM94Q12767 1356 aa19.29■□□□□ 0.68
TPM3-205ENST00000328159 NCOA3Q9Y6Q9 1424 aa19.29■□□□□ 0.68
TPM3-205ENST00000328159 HOXC9P31274 260 aa19.29■□□□□ 0.68
TPM3-205ENST00000328159 FRAT1Q92837 279 aaPredicted RBP19.28■□□□□ 0.68
TPM3-205ENST00000328159 THUMPD2Q9BTF0 503 aaKnown RBP19.28■□□□□ 0.68
TPM3-205ENST00000328159 NFAT5O94916 1531 aa19.28■□□□□ 0.68
TPM3-205ENST00000328159 LMTK3Q96Q04 1460 aa19.27■□□□□ 0.68
TPM3-205ENST00000328159 TRPM3Q9HCF6 1732 aaPredicted RBP19.27■□□□□ 0.68
TPM3-205ENST00000328159 IFT57Q9NWB7 429 aa19.27■□□□□ 0.68
TPM3-205ENST00000328159 RTL1A6NKG5 1358 aa19.27■□□□□ 0.68
TPM3-205ENST00000328159 FOXO3O43524 673 aa19.27■□□□□ 0.67
TPM3-205ENST00000328159 GNAI1P63096 354 aa19.27■□□□□ 0.67
TPM3-205ENST00000328159 BCL2L13Q9BXK5 485 aa19.27■□□□□ 0.67
TPM3-205ENST00000328159 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
TPM3-205ENST00000328159 DCCP43146 1447 aa19.26■□□□□ 0.67
TPM3-205ENST00000328159 EYA1Q99502 592 aa19.26■□□□□ 0.67
TPM3-205ENST00000328159 LAS1LQ9Y4W2 734 aaKnown RBP19.26■□□□□ 0.67
TPM3-205ENST00000328159 KDRP35968 1356 aa19.26■□□□□ 0.67
TPM3-205ENST00000328159 ZNF853P0CG23 659 aa19.25■□□□□ 0.67
TPM3-205ENST00000328159 ATF3P18847 181 aa19.25■□□□□ 0.67
TPM3-205ENST00000328159 MST1RQ04912 1400 aa19.25■□□□□ 0.67
TPM3-205ENST00000328159 STRCQ7RTU9 1775 aa19.25■□□□□ 0.67
TPM3-205ENST00000328159 PANK1Q8TE04 598 aa19.24■□□□□ 0.67
TPM3-205ENST00000328159 XPCQ01831 940 aaPredicted RBP19.24■□□□□ 0.67
TPM3-205ENST00000328159 KCNH5Q8NCM2 988 aa19.24■□□□□ 0.67
TPM3-205ENST00000328159 FAM83GA6ND36 823 aa19.23■□□□□ 0.67
TPM3-205ENST00000328159 KRT28Q7Z3Y7 464 aa19.23■□□□□ 0.67
TPM3-205ENST00000328159 SMC4Q9NTJ3 1288 aa19.23■□□□□ 0.67
TPM3-205ENST00000328159 PHRF1Q9P1Y6 1649 aaKnown RBP19.22■□□□□ 0.67
TPM3-205ENST00000328159 SSH1Q8WYL5 1049 aa19.22■□□□□ 0.67
TPM3-205ENST00000328159 CFAP44Q96MT7 982 aa19.22■□□□□ 0.67
TPM3-205ENST00000328159 SLIT3O75094 1523 aa19.22■□□□□ 0.67
TPM3-205ENST00000328159 IP6K1Q92551 441 aa19.21■□□□□ 0.67
TPM3-205ENST00000328159 COG6Q9Y2V7 657 aa19.21■□□□□ 0.67
TPM3-205ENST00000328159 DCTN1Q14203 1278 aa19.21■□□□□ 0.67
TPM3-205ENST00000328159 ZKSCAN2Q63HK3 967 aa19.21■□□□□ 0.67
TPM3-205ENST00000328159 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
TPM3-205ENST00000328159 KDM2BQ8NHM5 1336 aa19.2■□□□□ 0.66
TPM3-205ENST00000328159 ZNF428Q96B54 188 aa19.2■□□□□ 0.66
TPM3-205ENST00000328159 TNNQ9UQP3 1299 aa19.2■□□□□ 0.66
TPM3-205ENST00000328159 RBM19Q9Y4C8 960 aaKnown RBP19.2■□□□□ 0.66
TPM3-205ENST00000328159 XIRP1Q702N8 1843 aaKnown RBP19.2■□□□□ 0.66
TPM3-205ENST00000328159 ALDH1L2Q3SY69 923 aa19.19■□□□□ 0.66
TPM3-205ENST00000328159 ALS2Q96Q42 1657 aa19.19■□□□□ 0.66
TPM3-205ENST00000328159 RLBP1P12271 317 aa19.19■□□□□ 0.66
TPM3-205ENST00000328159 LTV1Q96GA3 475 aaPredicted RBP19.19■□□□□ 0.66
TPM3-205ENST00000328159 USP19O94966 1318 aa19.18■□□□□ 0.66
TPM3-205ENST00000328159 MS4A1P11836 297 aa19.18■□□□□ 0.66
TPM3-205ENST00000328159 MTHFSDQ2M296 383 aaKnown RBP19.18■□□□□ 0.66
TPM3-205ENST00000328159 CENPQQ7L2Z9 268 aaPredicted RBP19.18■□□□□ 0.66
TPM3-205ENST00000328159 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
TPM3-205ENST00000328159 MSH6P52701 1360 aa19.18■□□□□ 0.66
TPM3-205ENST00000328159 LMOD2Q6P5Q4 547 aa19.17■□□□□ 0.66
TPM3-205ENST00000328159 GCP02774 474 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 AAMPQ13685 434 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 GAS2L2Q8NHY3 880 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 VAMP4O75379 141 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 MCM10Q7L590 875 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
TPM3-205ENST00000328159 CLUAP1Q96AJ1 413 aa19.16■□□□□ 0.66
TPM3-205ENST00000328159 KIF16BQ96L93 1317 aa19.15■□□□□ 0.66
TPM3-205ENST00000328159 ZBTB7CA1YPR0 619 aa19.15■□□□□ 0.66
TPM3-205ENST00000328159 ATF7IPQ6VMQ6 1270 aa19.14■□□□□ 0.66
TPM3-205ENST00000328159 ARHGEF25Q86VW2 580 aa19.14■□□□□ 0.66
TPM3-205ENST00000328159 TSPYL6Q8N831 410 aa19.14■□□□□ 0.66
TPM3-205ENST00000328159 NOB1Q9ULX3 412 aaKnown RBP19.14■□□□□ 0.66
TPM3-205ENST00000328159 CRB1P82279 1406 aa19.14■□□□□ 0.65
TPM3-205ENST00000328159 CHL1O00533 1208 aa19.14■□□□□ 0.65
TPM3-205ENST00000328159 BRPF1P55201 1214 aaPredicted RBP19.14■□□□□ 0.65
TPM3-205ENST00000328159 FTSJ3Q8IY81 847 aaKnown RBP19.14■□□□□ 0.65
TPM3-205ENST00000328159 TCERG1O14776 1098 aaKnown RBP19.13■□□□□ 0.65
TPM3-205ENST00000328159 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
TPM3-205ENST00000328159 TRIM27P14373 513 aa19.13■□□□□ 0.65
TPM3-205ENST00000328159 MVPQ14764 893 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms