RNA–Protein interactions for RNA: ENST00000327968.6

DDX53-201, Transcript of DEAD-box helicase 53, humanhuman

APPRIS P1 BASIC

Gene DDX53, Length 3,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53-201ENST00000327968 PDCL3Q9H2J4 239 aa11.83□□□□□ -0.52
DDX53-201ENST00000327968 TPM2P07951 284 aa11.83□□□□□ -0.52
DDX53-201ENST00000327968 ZNF830Q96NB3 372 aaPredicted RBP11.83□□□□□ -0.52
DDX53-201ENST00000327968 SLIT1O75093 1534 aa11.82□□□□□ -0.52
DDX53-201ENST00000327968 NRXN3Q9Y4C0 1643 aa11.82□□□□□ -0.52
DDX53-201ENST00000327968 IGSF3O75054 1194 aa11.82□□□□□ -0.52
DDX53-201ENST00000327968 DDX19BQ9UMR2 479 aa11.82□□□□□ -0.52
DDX53-201ENST00000327968 TNRQ92752 1358 aa11.82□□□□□ -0.52
DDX53-201ENST00000327968 SYCE3A1L190 88 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 RIPK4P57078 832 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 K7ELQ4 463 aaPredicted RBP11.81□□□□□ -0.52
DDX53-201ENST00000327968 CCDC173Q0VFZ6 552 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 ATF7IPQ6VMQ6 1270 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 C14orf93Q9H972 538 aaKnown RBP11.81□□□□□ -0.52
DDX53-201ENST00000327968 ASXL1Q8IXJ9 1541 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 ARHGAP23Q9P227 1491 aa11.81□□□□□ -0.52
DDX53-201ENST00000327968 DIP2AQ14689 1571 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 QRICH2Q9H0J4 1663 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 VGFO15240 615 aaPredicted RBP11.8□□□□□ -0.52
DDX53-201ENST00000327968 BAG4O95429 457 aaKnown RBP11.8□□□□□ -0.52
DDX53-201ENST00000327968 PRIM1P49642 420 aaKnown RBP11.8□□□□□ -0.52
DDX53-201ENST00000327968 IDI1Q13907 227 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 CHD1LQ86WJ1 897 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 CABP2Q9NPB3 220 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 ALKQ9UM73 1620 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 SKOR2Q2VWA4 1001 aaPredicted RBP11.8□□□□□ -0.52
DDX53-201ENST00000327968 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.8□□□□□ -0.52
DDX53-201ENST00000327968 TBC1D9Q6ZT07 1266 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 RBSNQ9H1K0 784 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 GDPD2Q9HCC8 539 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 MYOM1P52179 1685 aa11.8□□□□□ -0.52
DDX53-201ENST00000327968 ADGRF5Q8IZF2 1346 aa11.79□□□□□ -0.52
DDX53-201ENST00000327968 HMOX1P09601 288 aa11.79□□□□□ -0.52
DDX53-201ENST00000327968 C17orf53Q8N3J3 647 aaPredicted RBP11.79□□□□□ -0.52
DDX53-201ENST00000327968 ZGPATQ8N5A5 531 aaKnown RBP11.79□□□□□ -0.52
DDX53-201ENST00000327968 SRPK2P78362 688 aaKnown RBP11.79□□□□□ -0.52
DDX53-201ENST00000327968 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
DDX53-201ENST00000327968 C16orf71Q8IYS4 520 aaPredicted RBP11.79□□□□□ -0.52
DDX53-201ENST00000327968 RIMS1Q86UR5 1692 aaKnown RBP11.78□□□□□ -0.52
DDX53-201ENST00000327968 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
DDX53-201ENST00000327968 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
DDX53-201ENST00000327968 ATAD2Q6PL18 1390 aa11.78□□□□□ -0.52
DDX53-201ENST00000327968 AK9Q5TCS8 1911 aa11.78□□□□□ -0.52
DDX53-201ENST00000327968 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
DDX53-201ENST00000327968 CBX1P83916 185 aa11.78□□□□□ -0.52
DDX53-201ENST00000327968 RIMS2Q9UQ26 1411 aa11.77□□□□□ -0.52
DDX53-201ENST00000327968 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.52
DDX53-201ENST00000327968 ZSCAN23Q3MJ62 389 aa11.77□□□□□ -0.52
DDX53-201ENST00000327968 INSRP06213 1382 aa11.77□□□□□ -0.53
DDX53-201ENST00000327968 SMARCA5O60264 1052 aaPredicted RBP11.77□□□□□ -0.53
DDX53-201ENST00000327968 PUS7Q96PZ0 661 aaKnown RBP11.77□□□□□ -0.53
DDX53-201ENST00000327968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX53-201ENST00000327968 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.76□□□□□ -0.53
DDX53-201ENST00000327968 OFD1O75665 1012 aa11.75□□□□□ -0.53
DDX53-201ENST00000327968 ESF1Q9H501 851 aaKnown RBP11.75□□□□□ -0.53
DDX53-201ENST00000327968 USP32Q8NFA0 1604 aa11.75□□□□□ -0.53
DDX53-201ENST00000327968 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
DDX53-201ENST00000327968 CPS1P31327 1500 aa11.75□□□□□ -0.53
DDX53-201ENST00000327968 IPO8O15397 1037 aaKnown RBP11.75□□□□□ -0.53
DDX53-201ENST00000327968 WDR63Q8IWG1 891 aa11.75□□□□□ -0.53
DDX53-201ENST00000327968 SPDYE4A6NLX3 237 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 TECPR2O15040 1411 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 SOX12O15370 315 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 FBXO31Q5XUX0 539 aaPredicted RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 NSFL1CQ9UNZ2 370 aaKnown RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 CHMP3Q9Y3E7 222 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 MED14O60244 1454 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 TMPOP42166 694 aaKnown RBP11.74□□□□□ -0.53
DDX53-201ENST00000327968 SMC5Q8IY18 1101 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 PTPRMP28827 1452 aa11.74□□□□□ -0.53
DDX53-201ENST00000327968 TMEM2Q9UHN6 1383 aa11.73□□□□□ -0.53
DDX53-201ENST00000327968 HDGFP51858 240 aaKnown RBP11.72□□□□□ -0.53
DDX53-201ENST00000327968 NUCB1Q02818 461 aa11.72□□□□□ -0.53
DDX53-201ENST00000327968 PLEKHG1Q9ULL1 1385 aa11.72□□□□□ -0.53
DDX53-201ENST00000327968 KLHL40Q2TBA0 621 aa11.72□□□□□ -0.53
DDX53-201ENST00000327968 KIF16BQ96L93 1317 aa11.71□□□□□ -0.53
DDX53-201ENST00000327968 ADGRB2O60241 1585 aa11.71□□□□□ -0.53
DDX53-201ENST00000327968 TSPYL6Q8N831 410 aa11.71□□□□□ -0.53
DDX53-201ENST00000327968 SIRT1Q96EB6 747 aa11.71□□□□□ -0.53
DDX53-201ENST00000327968 ZBTB40Q9NUA8 1239 aa11.71□□□□□ -0.53
DDX53-201ENST00000327968 DCTN1Q14203 1278 aa11.71□□□□□ -0.54
DDX53-201ENST00000327968 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.54
DDX53-201ENST00000327968 NEK4P51957 841 aa11.71□□□□□ -0.54
DDX53-201ENST00000327968 KIF2CQ99661 725 aa11.71□□□□□ -0.54
DDX53-201ENST00000327968 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 CIZ1Q9ULV3 898 aaPredicted RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 MINK1Q8N4C8 1332 aaPredicted RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 NPC1L1Q9UHC9 1359 aa11.7□□□□□ -0.54
DDX53-201ENST00000327968 CDC45O75419 566 aa11.7□□□□□ -0.54
DDX53-201ENST00000327968 RBM25P49756 843 aaKnown RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 HDAC1Q13547 482 aaPredicted RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 YTHDC2Q9H6S0 1430 aaKnown RBP11.7□□□□□ -0.54
DDX53-201ENST00000327968 NINLQ9Y2I6 1382 aa11.7□□□□□ -0.54
DDX53-201ENST00000327968 TMEM63CQ9P1W3 806 aa11.69□□□□□ -0.54
DDX53-201ENST00000327968 FAM135BQ49AJ0 1406 aa11.69□□□□□ -0.54
DDX53-201ENST00000327968 SPC24Q8NBT2 197 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms