RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-223ENST00000324771 PKNOX2Q96KN3 472 aa14.5□□□□□ -0.09
DDR1-223ENST00000324771 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
DDR1-223ENST00000324771 RIMS2Q9UQ26 1411 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 GNAT3A8MTJ3 354 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 GNAI3P08754 354 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 ATP7AQ04656 1500 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 BTBD11A6QL63 1104 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 KCNA6P17658 529 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 INTS3Q68E01 1043 aaKnown RBP14.49□□□□□ -0.09
DDR1-223ENST00000324771 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 ZMYM3Q14202 1370 aa14.49□□□□□ -0.09
DDR1-223ENST00000324771 SAMD9LQ8IVG5 1584 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 PLA2R1Q13018 1463 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 SRGAP3O43295 1099 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 NPATQ14207 1427 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 NEK4P51957 841 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 FOSBP53539 338 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 EIF4A2Q14240 407 aaKnown RBP14.48□□□□□ -0.09
DDR1-223ENST00000324771 TTC37Q6PGP7 1564 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 UHRF1BP1LA0JNW5 1464 aa14.48□□□□□ -0.09
DDR1-223ENST00000324771 TATP17735 454 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 SRCIN1Q9C0H9 1055 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 CHMP5Q9NZZ3 219 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 ISY1Q9ULR0 285 aaKnown RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 CT47B1P0C2W7 299 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 L1TD1Q5T7N2 865 aaKnown RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 CABLES1Q8TDN4 633 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 IFT57Q9NWB7 429 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 NUTM2BA6NNL0 878 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 NUTM2EB1AL46 878 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 HSPA2P54652 639 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 NUTM1Q86Y26 1132 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 NUTM2AQ8IVF1 878 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 JARID2Q92833 1246 aaPredicted RBP14.47□□□□□ -0.09
DDR1-223ENST00000324771 GCC1Q96CN9 775 aa14.47□□□□□ -0.09
DDR1-223ENST00000324771 PPIP5K1Q6PFW1 1433 aa14.46□□□□□ -0.09
DDR1-223ENST00000324771 AAMPQ13685 434 aa14.46□□□□□ -0.09
DDR1-223ENST00000324771 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.09
DDR1-223ENST00000324771 LRRC59Q96AG4 307 aaKnown RBP14.46□□□□□ -0.09
DDR1-223ENST00000324771 GCC2Q8IWJ2 1684 aa14.45□□□□□ -0.1
DDR1-223ENST00000324771 TAF7Q15545 349 aaPredicted RBP14.44□□□□□ -0.1
DDR1-223ENST00000324771 PIP4K2AP48426 406 aaPredicted RBP14.44□□□□□ -0.1
DDR1-223ENST00000324771 GNL2Q13823 731 aaKnown RBP14.44□□□□□ -0.1
DDR1-223ENST00000324771 YTHDC2Q9H6S0 1430 aaKnown RBP14.44□□□□□ -0.1
DDR1-223ENST00000324771 MAGI2Q86UL8 1455 aa14.44□□□□□ -0.1
DDR1-223ENST00000324771 LTKP29376 864 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 CABP4P57796 275 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 POLR3AO14802 1390 aaPredicted RBP14.43□□□□□ -0.1
DDR1-223ENST00000324771 ATP10AO60312 1499 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 MCTP1Q6DN14 999 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 DNAJC2Q99543 621 aaKnown RBP14.43□□□□□ -0.1
DDR1-223ENST00000324771 MEIS3Q99687 375 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 KDM4AO75164 1064 aa14.43□□□□□ -0.1
DDR1-223ENST00000324771 CCT4P50991 539 aaKnown RBP14.43□□□□□ -0.1
DDR1-223ENST00000324771 LRRCC1Q9C099 1032 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 SEC24BO95487 1268 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 PPP6R1Q9UPN7 881 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 MAST1Q9Y2H9 1570 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 VPS37CA5D8V6 355 aaPredicted RBP14.42□□□□□ -0.1
DDR1-223ENST00000324771 APPP05067 770 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 MTHFSDQ2M296 383 aaKnown RBP14.42□□□□□ -0.1
DDR1-223ENST00000324771 KRT28Q7Z3Y7 464 aa14.42□□□□□ -0.1
DDR1-223ENST00000324771 LRRFIP2Q9Y608 721 aaKnown RBP14.41□□□□□ -0.1
DDR1-223ENST00000324771 C16orf71Q8IYS4 520 aaPredicted RBP14.41□□□□□ -0.1
DDR1-223ENST00000324771 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
DDR1-223ENST00000324771 FSD1Q9BTV5 496 aa14.41□□□□□ -0.1
DDR1-223ENST00000324771 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
DDR1-223ENST00000324771 FLIIQ13045 1269 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 ALDH1L2Q3SY69 923 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 UPF3BQ9BZI7 483 aaKnown RBP14.4□□□□□ -0.1
DDR1-223ENST00000324771 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 ARID3AQ99856 593 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 PIP4K2BP78356 416 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 DRC7Q8IY82 874 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 EYA1Q99502 592 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 BRPF3Q9ULD4 1205 aa14.4□□□□□ -0.1
DDR1-223ENST00000324771 PTPRTO14522 1441 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 VAMP4O75379 141 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 TRIM35Q9UPQ4 493 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 CHD1O14646 1710 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 LARP6Q9BRS8 491 aaKnown RBP14.39□□□□□ -0.11
DDR1-223ENST00000324771 ABCC11Q96J66 1382 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 NSD2O96028 1365 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 CCDC27Q2M243 656 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 RUFY2Q8WXA3 655 aa14.39□□□□□ -0.11
DDR1-223ENST00000324771 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
DDR1-223ENST00000324771 PI4KAP2A4QPH2 592 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 DDX11L8A8MPP1 907 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 CWC27Q6UX04 472 aaKnown RBP14.38□□□□□ -0.11
DDR1-223ENST00000324771 RPAP2Q8IXW5 612 aaPredicted RBP14.38□□□□□ -0.11
DDR1-223ENST00000324771 PI4KAP1Q8N8J0 262 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 ORAI2Q96SN7 254 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 KCNH5Q8NCM2 988 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 WASHC4Q2M389 1173 aa14.38□□□□□ -0.11
DDR1-223ENST00000324771 MSNP26038 577 aaKnown RBP14.37□□□□□ -0.11
DDR1-223ENST00000324771 HSP90AB4PQ58FF6 505 aa14.37□□□□□ -0.11
DDR1-223ENST00000324771 PIK3C2GO75747 1445 aa14.37□□□□□ -0.11
DDR1-223ENST00000324771 ERC2O15083 957 aa14.37□□□□□ -0.11
DDR1-223ENST00000324771 AACSQ86V21 672 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms