RNA–Protein interactions for RNA: ENST00000324616.9

C12orf40-201, Transcript of chromosome 12 open reading frame 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C12orf40, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf40-201ENST00000324616 PCDHB15Q9Y5E8 787 aa13.8□□□□□ -0.2
C12orf40-201ENST00000324616 FMN2Q9NZ56 1722 aa13.8□□□□□ -0.2
C12orf40-201ENST00000324616 SSH2Q76I76 1423 aa13.8□□□□□ -0.2
C12orf40-201ENST00000324616 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
C12orf40-201ENST00000324616 THUMPD2Q9BTF0 503 aaKnown RBP13.8□□□□□ -0.2
C12orf40-201ENST00000324616 NEFMP07197 916 aa13.79□□□□□ -0.2
C12orf40-201ENST00000324616 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
C12orf40-201ENST00000324616 TRIM27P14373 513 aa13.78□□□□□ -0.2
C12orf40-201ENST00000324616 MVPQ14764 893 aaKnown RBP13.78□□□□□ -0.2
C12orf40-201ENST00000324616 C8orf34Q49A92 452 aa13.78□□□□□ -0.2
C12orf40-201ENST00000324616 AAMPQ13685 434 aa13.77□□□□□ -0.2
C12orf40-201ENST00000324616 DZIP1LQ8IYY4 767 aaKnown RBP13.77□□□□□ -0.2
C12orf40-201ENST00000324616 PMFBP1Q8TBY8 1022 aa13.77□□□□□ -0.2
C12orf40-201ENST00000324616 PIK3C2AO00443 1686 aa13.77□□□□□ -0.21
C12orf40-201ENST00000324616 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.21
C12orf40-201ENST00000324616 USP31Q70CQ4 1352 aa13.76□□□□□ -0.21
C12orf40-201ENST00000324616 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
C12orf40-201ENST00000324616 FAM161AQ3B820 660 aa13.76□□□□□ -0.21
C12orf40-201ENST00000324616 FTSJ3Q8IY81 847 aaKnown RBP13.76□□□□□ -0.21
C12orf40-201ENST00000324616 CHD2O14647 1828 aaKnown RBP13.76□□□□□ -0.21
C12orf40-201ENST00000324616 MARF1Q9Y4F3 1742 aaKnown RBP13.76□□□□□ -0.21
C12orf40-201ENST00000324616 NOB1Q9ULX3 412 aaKnown RBP13.76□□□□□ -0.21
C12orf40-201ENST00000324616 ATF7IPQ6VMQ6 1270 aa13.75□□□□□ -0.21
C12orf40-201ENST00000324616 AEBP1Q8IUX7 1158 aa13.75□□□□□ -0.21
C12orf40-201ENST00000324616 KCNA6P17658 529 aa13.75□□□□□ -0.21
C12orf40-201ENST00000324616 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
C12orf40-201ENST00000324616 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
C12orf40-201ENST00000324616 FAM83GA6ND36 823 aa13.74□□□□□ -0.21
C12orf40-201ENST00000324616 ZNF853P0CG23 659 aa13.74□□□□□ -0.21
C12orf40-201ENST00000324616 HSP90AB2PQ58FF8 381 aa13.74□□□□□ -0.21
C12orf40-201ENST00000324616 SOX12O15370 315 aa13.73□□□□□ -0.21
C12orf40-201ENST00000324616 ALDH1L2Q3SY69 923 aa13.73□□□□□ -0.21
C12orf40-201ENST00000324616 TSPYL6Q8N831 410 aa13.73□□□□□ -0.21
C12orf40-201ENST00000324616 MBIPQ9NS73 344 aa13.73□□□□□ -0.21
C12orf40-201ENST00000324616 IFT57Q9NWB7 429 aa13.73□□□□□ -0.21
C12orf40-201ENST00000324616 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 TTC21AQ8NDW8 1320 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 KIF16BQ96L93 1317 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 GNAI1P63096 354 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 CALD1Q05682 793 aaKnown RBP13.72□□□□□ -0.21
C12orf40-201ENST00000324616 DCTN1Q14203 1278 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 ADAMTSL3P82987 1691 aa13.72□□□□□ -0.21
C12orf40-201ENST00000324616 VAMP4O75379 141 aa13.71□□□□□ -0.21
C12orf40-201ENST00000324616 ITPRIPQ8IWB1 547 aa13.71□□□□□ -0.21
C12orf40-201ENST00000324616 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
C12orf40-201ENST00000324616 NGDNQ8NEJ9 315 aaKnown RBP13.71□□□□□ -0.21
C12orf40-201ENST00000324616 PIK3R4Q99570 1358 aa13.71□□□□□ -0.21
C12orf40-201ENST00000324616 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
C12orf40-201ENST00000324616 MAP3K19Q56UN5 1328 aa13.71□□□□□ -0.22
C12orf40-201ENST00000324616 LMOD3Q0VAK6 560 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 CFAP44Q96MT7 982 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 RWDD1Q9H446 243 aaPredicted RBP13.7□□□□□ -0.22
C12orf40-201ENST00000324616 DDX19BQ9UMR2 479 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 SETD1BQ9UPS6 1966 aaKnown RBP13.7□□□□□ -0.22
C12orf40-201ENST00000324616 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
C12orf40-201ENST00000324616 ZNF428Q96B54 188 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 PDZRN3Q9UPQ7 1066 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 USP54Q70EL1 1684 aa13.7□□□□□ -0.22
C12orf40-201ENST00000324616 ELL2O00472 640 aaPredicted RBP13.69□□□□□ -0.22
C12orf40-201ENST00000324616 IPO8O15397 1037 aaKnown RBP13.69□□□□□ -0.22
C12orf40-201ENST00000324616 MRPL50Q8N5N7 158 aaKnown RBP13.68□□□□□ -0.22
C12orf40-201ENST00000324616 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
C12orf40-201ENST00000324616 SBNO1A3KN83 1393 aa13.68□□□□□ -0.22
C12orf40-201ENST00000324616 ZBTB40Q9NUA8 1239 aa13.67□□□□□ -0.22
C12orf40-201ENST00000324616 FLT4P35916 1363 aa13.67□□□□□ -0.22
C12orf40-201ENST00000324616 TWISTNBQ3B726 338 aaPredicted RBP13.67□□□□□ -0.22
C12orf40-201ENST00000324616 ARHGEF10O15013 1369 aa13.66□□□□□ -0.22
C12orf40-201ENST00000324616 LTN1O94822 1766 aa13.66□□□□□ -0.22
C12orf40-201ENST00000324616 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
C12orf40-201ENST00000324616 ANKLE2Q86XL3 938 aa13.66□□□□□ -0.22
C12orf40-201ENST00000324616 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
C12orf40-201ENST00000324616 NUTM2GQ5VZR2 741 aa13.65□□□□□ -0.22
C12orf40-201ENST00000324616 MCM10Q7L590 875 aa13.65□□□□□ -0.22
C12orf40-201ENST00000324616 NLRP6P59044 892 aa13.65□□□□□ -0.22
C12orf40-201ENST00000324616 KDRP35968 1356 aa13.64□□□□□ -0.23
C12orf40-201ENST00000324616 SEC24BO95487 1268 aa13.64□□□□□ -0.23
C12orf40-201ENST00000324616 ARHGAP45Q92619 1136 aa13.64□□□□□ -0.23
C12orf40-201ENST00000324616 USP19O94966 1318 aa13.64□□□□□ -0.23
C12orf40-201ENST00000324616 KRT24Q2M2I5 525 aa13.63□□□□□ -0.23
C12orf40-201ENST00000324616 DDRGK1Q96HY6 314 aa13.63□□□□□ -0.23
C12orf40-201ENST00000324616 FOXO3O43524 673 aa13.63□□□□□ -0.23
C12orf40-201ENST00000324616 AMPHP49418 695 aa13.63□□□□□ -0.23
C12orf40-201ENST00000324616 EYA1Q99502 592 aa13.63□□□□□ -0.23
C12orf40-201ENST00000324616 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 CHL1O00533 1208 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 NBR1Q14596 966 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 ABCC4O15439 1325 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 IGSF1Q8N6C5 1336 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 CRB1P82279 1406 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 MTHFSDQ2M296 383 aaKnown RBP13.62□□□□□ -0.23
C12orf40-201ENST00000324616 SMC5Q8IY18 1101 aa13.62□□□□□ -0.23
C12orf40-201ENST00000324616 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
C12orf40-201ENST00000324616 ABTB2Q8N961 1025 aa13.61□□□□□ -0.23
C12orf40-201ENST00000324616 HOXC9P31274 260 aa13.6□□□□□ -0.23
C12orf40-201ENST00000324616 PHF8Q9UPP1 1060 aa13.6□□□□□ -0.23
C12orf40-201ENST00000324616 ADGRL3Q9HAR2 1447 aa13.6□□□□□ -0.23
C12orf40-201ENST00000324616 LRRC37A3O60309 1634 aa13.6□□□□□ -0.23
C12orf40-201ENST00000324616 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
C12orf40-201ENST00000324616 KIF24Q5T7B8 1368 aa13.59□□□□□ -0.23
C12orf40-201ENST00000324616 C1orf115Q9H7X2 142 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms