RNA–Protein interactions for RNA: ENST00000323848.13

SRRM1-201, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRRM1, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-201ENST00000323848 RNF123Q5XPI4 1314 aa16.87■□□□□ 0.29
SRRM1-201ENST00000323848 E9PCH4 1651 aa16.87■□□□□ 0.29
SRRM1-201ENST00000323848 MTHFSDQ2M296 383 aaKnown RBP16.87■□□□□ 0.29
SRRM1-201ENST00000323848 IL27Q8NEV9 243 aa16.87■□□□□ 0.29
SRRM1-201ENST00000323848 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
SRRM1-201ENST00000323848 IQGAP3Q86VI3 1631 aa16.87■□□□□ 0.29
SRRM1-201ENST00000323848 MLH3Q9UHC1 1453 aa16.86■□□□□ 0.29
SRRM1-201ENST00000323848 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
SRRM1-201ENST00000323848 EYA1Q99502 592 aa16.86■□□□□ 0.29
SRRM1-201ENST00000323848 CHD1LQ86WJ1 897 aa16.86■□□□□ 0.29
SRRM1-201ENST00000323848 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
SRRM1-201ENST00000323848 CFAP44Q96MT7 982 aa16.85■□□□□ 0.29
SRRM1-201ENST00000323848 NEO1Q92859 1461 aa16.85■□□□□ 0.29
SRRM1-201ENST00000323848 C16orf71Q8IYS4 520 aaPredicted RBP16.85■□□□□ 0.29
SRRM1-201ENST00000323848 SIL1Q9H173 461 aa16.85■□□□□ 0.29
SRRM1-201ENST00000323848 TTC5Q8N0Z6 440 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 ANO2Q9NQ90 1003 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 PRR36Q9H6K5 1346 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 PLXNC1O60486 1568 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 VAMP4O75379 141 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 UBTFL1P0CB47 393 aaPredicted RBP16.84■□□□□ 0.29
SRRM1-201ENST00000323848 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
SRRM1-201ENST00000323848 FGD1P98174 961 aa16.83■□□□□ 0.29
SRRM1-201ENST00000323848 MEIS3Q99687 375 aa16.83■□□□□ 0.29
SRRM1-201ENST00000323848 IL13P35225 146 aa16.83■□□□□ 0.28
SRRM1-201ENST00000323848 IFT57Q9NWB7 429 aa16.83■□□□□ 0.28
SRRM1-201ENST00000323848 FAM177BA6PVY3 158 aa16.82■□□□□ 0.28
SRRM1-201ENST00000323848 BLMP54132 1417 aaPredicted RBP16.82■□□□□ 0.28
SRRM1-201ENST00000323848 PTCD1O75127 700 aaKnown RBP16.82■□□□□ 0.28
SRRM1-201ENST00000323848 CCDC30Q5VVM6 783 aa16.82■□□□□ 0.28
SRRM1-201ENST00000323848 ABCC3O15438 1527 aa16.82■□□□□ 0.28
SRRM1-201ENST00000323848 RIC3Q7Z5B4 369 aa16.82■□□□□ 0.28
SRRM1-201ENST00000323848 CCDC85AQ96PX6 553 aaPredicted RBP16.82■□□□□ 0.28
SRRM1-201ENST00000323848 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 C8orf34Q49A92 452 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 G2E3Q7L622 706 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 UNC13BO14795 1591 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 PLCB2Q00722 1185 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 SLC39A6Q13433 755 aa16.81■□□□□ 0.28
SRRM1-201ENST00000323848 NSD2O96028 1365 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 KIAA1211Q6ZU35 1233 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 ROBO2Q9HCK4 1378 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 ZNF521Q96K83 1311 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 NPHP1O15259 732 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 PRDM11Q9NQV5 511 aa16.8■□□□□ 0.28
SRRM1-201ENST00000323848 CEP152O94986 1710 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 GOLGA6L22H0YM25 854 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 TOM1L2Q6ZVM7 507 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 KRT28Q7Z3Y7 464 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 SHROOM2Q13796 1616 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 PLEKHO1Q53GL0 409 aaPredicted RBP16.79■□□□□ 0.28
SRRM1-201ENST00000323848 HECW2Q9P2P5 1572 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 NUTM1Q86Y26 1132 aa16.79■□□□□ 0.28
SRRM1-201ENST00000323848 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
SRRM1-201ENST00000323848 ZMYM4Q5VZL5 1548 aa16.78■□□□□ 0.28
SRRM1-201ENST00000323848 TMEM2Q9UHN6 1383 aa16.78■□□□□ 0.28
SRRM1-201ENST00000323848 RNF17Q9BXT8 1623 aaKnown RBP16.77■□□□□ 0.28
SRRM1-201ENST00000323848 KIF1BO60333 1816 aa16.77■□□□□ 0.28
SRRM1-201ENST00000323848 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.28
SRRM1-201ENST00000323848 NPC1L1Q9UHC9 1359 aa16.77■□□□□ 0.28
SRRM1-201ENST00000323848 TET3O43151 1660 aa16.77■□□□□ 0.27
SRRM1-201ENST00000323848 SRGAP3O43295 1099 aa16.76■□□□□ 0.27
SRRM1-201ENST00000323848 SETD1BQ9UPS6 1966 aaKnown RBP16.76■□□□□ 0.27
SRRM1-201ENST00000323848 GNAI2P04899 355 aa16.76■□□□□ 0.27
SRRM1-201ENST00000323848 MRPL50Q8N5N7 158 aaKnown RBP16.76■□□□□ 0.27
SRRM1-201ENST00000323848 ANP32BQ92688 251 aaKnown RBP16.76■□□□□ 0.27
SRRM1-201ENST00000323848 PLEKHF1Q96S99 279 aa16.76■□□□□ 0.27
SRRM1-201ENST00000323848 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
SRRM1-201ENST00000323848 LRRFIP2Q9Y608 721 aaKnown RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 NUTM2BA6NNL0 878 aaPredicted RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 NUTM2EB1AL46 878 aaPredicted RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 CT47B1P0C2W7 299 aaPredicted RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 NUTM2AQ8IVF1 878 aaPredicted RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 KDM5AP29375 1690 aaKnown RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 FLIIQ13045 1269 aa16.75■□□□□ 0.27
SRRM1-201ENST00000323848 SPHKAPQ2M3C7 1700 aa16.75■□□□□ 0.27
SRRM1-201ENST00000323848 OTUD7AQ8TE49 926 aaPredicted RBP16.75■□□□□ 0.27
SRRM1-201ENST00000323848 LGR6Q9HBX8 967 aa16.75■□□□□ 0.27
SRRM1-201ENST00000323848 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
SRRM1-201ENST00000323848 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
SRRM1-201ENST00000323848 PHAXQ9H814 394 aaKnown RBP16.74■□□□□ 0.27
SRRM1-201ENST00000323848 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
SRRM1-201ENST00000323848 NEXNQ0ZGT2 675 aa16.74■□□□□ 0.27
SRRM1-201ENST00000323848 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
SRRM1-201ENST00000323848 TAF7LQ5H9L4 462 aa16.74■□□□□ 0.27
SRRM1-201ENST00000323848 GORABQ5T7V8 394 aa16.74■□□□□ 0.27
SRRM1-201ENST00000323848 DTNBO60941 627 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 MCCP23508 829 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 MADDQ8WXG6 1647 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 PI4KAP2A4QPH2 592 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 PI4KAP1Q8N8J0 262 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 ANKRD24Q8TF21 1146 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 SRCIN1Q9C0H9 1055 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 TBX22Q9Y458 520 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 KDM2BQ8NHM5 1336 aa16.73■□□□□ 0.27
SRRM1-201ENST00000323848 PPRC1Q5VV67 1664 aaKnown RBP16.72■□□□□ 0.27
SRRM1-201ENST00000323848 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
SRRM1-201ENST00000323848 NINLQ9Y2I6 1382 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms