RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
SHROOM1-201ENST00000319854 VSIG10Q8N0Z9 540 aa19.61■□□□□ 0.73
SHROOM1-201ENST00000319854 SPRYD3Q8NCJ5 442 aa19.61■□□□□ 0.73
SHROOM1-201ENST00000319854 SULT6B1Q6IMI4 303 aa19.6■□□□□ 0.73
SHROOM1-201ENST00000319854 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
SHROOM1-201ENST00000319854 VIRMAQ69YN4 1812 aaKnown RBP19.6■□□□□ 0.73
SHROOM1-201ENST00000319854 BECN1Q14457 450 aa19.6■□□□□ 0.73
SHROOM1-201ENST00000319854 HSP90AB2PQ58FF8 381 aa19.59■□□□□ 0.73
SHROOM1-201ENST00000319854 ZMYND15Q9H091 742 aa19.59■□□□□ 0.73
SHROOM1-201ENST00000319854 EID1Q9Y6B2 187 aa19.58■□□□□ 0.73
SHROOM1-201ENST00000319854 KRT24Q2M2I5 525 aa19.58■□□□□ 0.73
SHROOM1-201ENST00000319854 CPS1P31327 1500 aa19.58■□□□□ 0.73
SHROOM1-201ENST00000319854 LRRC7Q96NW7 1537 aa19.58■□□□□ 0.73
SHROOM1-201ENST00000319854 MBIPQ9NS73 344 aa19.58■□□□□ 0.72
SHROOM1-201ENST00000319854 AMOTL2Q9Y2J4 779 aa19.58■□□□□ 0.72
SHROOM1-201ENST00000319854 TBC1D2Q9BYX2 928 aa19.57■□□□□ 0.72
SHROOM1-201ENST00000319854 EDC4Q6P2E9 1401 aaKnown RBP19.57■□□□□ 0.72
SHROOM1-201ENST00000319854 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 DDX19BQ9UMR2 479 aa19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 MAP2P11137 1827 aaKnown RBP19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 MCM10Q7L590 875 aa19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 NGDNQ8NEJ9 315 aaKnown RBP19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 ATP7BP35670 1465 aa19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 C14orf37Q86TY3 774 aa19.56■□□□□ 0.72
SHROOM1-201ENST00000319854 GOLGA6L3A6NEY3 463 aa19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 C8orf58Q8NAV2 365 aa19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 MIS18AQ9NYP9 233 aa19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 ADGRB2O60241 1585 aa19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 CPSF1Q10570 1443 aaKnown RBP19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 TTC21BQ7Z4L5 1316 aa19.55■□□□□ 0.72
SHROOM1-201ENST00000319854 IPO8O15397 1037 aaKnown RBP19.54■□□□□ 0.72
SHROOM1-201ENST00000319854 CLCN1P35523 988 aa19.54■□□□□ 0.72
SHROOM1-201ENST00000319854 EIF4A2Q14240 407 aaKnown RBP19.54■□□□□ 0.72
SHROOM1-201ENST00000319854 MED14O60244 1454 aa19.54■□□□□ 0.72
SHROOM1-201ENST00000319854 LNPKQ9C0E8 428 aa19.54■□□□□ 0.72
SHROOM1-201ENST00000319854 KIF13AQ9H1H9 1805 aa19.53■□□□□ 0.72
SHROOM1-201ENST00000319854 IL16Q14005 1332 aa19.53■□□□□ 0.72
SHROOM1-201ENST00000319854 NRXN3Q9Y4C0 1643 aa19.53■□□□□ 0.72
SHROOM1-201ENST00000319854 TWISTNBQ3B726 338 aaPredicted RBP19.53■□□□□ 0.72
SHROOM1-201ENST00000319854 ZNF692Q9BU19 519 aaPredicted RBP19.53■□□□□ 0.72
SHROOM1-201ENST00000319854 VAMP4O75379 141 aa19.52■□□□□ 0.72
SHROOM1-201ENST00000319854 CT47B1P0C2W7 299 aaPredicted RBP19.52■□□□□ 0.72
SHROOM1-201ENST00000319854 HSP90AA2PQ14568 343 aaPredicted RBP19.52■□□□□ 0.72
SHROOM1-201ENST00000319854 FAM135BQ49AJ0 1406 aa19.52■□□□□ 0.72
SHROOM1-201ENST00000319854 KIF16BQ96L93 1317 aa19.52■□□□□ 0.72
SHROOM1-201ENST00000319854 GLIPR1L2Q4G1C9 344 aa19.52■□□□□ 0.71
SHROOM1-201ENST00000319854 KIF20BQ96Q89 1820 aa19.52■□□□□ 0.71
SHROOM1-201ENST00000319854 REREQ9P2R6 1566 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 GNAI1P63096 354 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 LTV1Q96GA3 475 aaPredicted RBP19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 DLC1Q96QB1 1528 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 ZBTB7CA1YPR0 619 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 MCM4P33991 863 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 TBC1D32Q96NH3 1257 aa19.51■□□□□ 0.71
SHROOM1-201ENST00000319854 MFAP1P55081 439 aaKnown RBP19.5■□□□□ 0.71
SHROOM1-201ENST00000319854 FOXO3O43524 673 aa19.5■□□□□ 0.71
SHROOM1-201ENST00000319854 ADAMTS13Q76LX8 1427 aa19.5■□□□□ 0.71
SHROOM1-201ENST00000319854 HSP90AA1P07900 732 aaKnown RBP19.49■□□□□ 0.71
SHROOM1-201ENST00000319854 ZBTB40Q9NUA8 1239 aa19.49■□□□□ 0.71
SHROOM1-201ENST00000319854 UPF2Q9HAU5 1272 aaKnown RBP19.48■□□□□ 0.71
SHROOM1-201ENST00000319854 SETD1AO15047 1707 aaKnown RBP19.48■□□□□ 0.71
SHROOM1-201ENST00000319854 NCBP3Q53F19 620 aaKnown RBP19.47■□□□□ 0.71
SHROOM1-201ENST00000319854 ANKRD26Q9UPS8 1709 aa19.47■□□□□ 0.71
SHROOM1-201ENST00000319854 AMPHP49418 695 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 MRPL50Q8N5N7 158 aaKnown RBP19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 IFT57Q9NWB7 429 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 APBB1O00213 710 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 CALD1Q05682 793 aaKnown RBP19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 ANKRD45Q5TZF3 282 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 CFAP44Q96MT7 982 aa19.46■□□□□ 0.71
SHROOM1-201ENST00000319854 PTPRUQ92729 1446 aa19.45■□□□□ 0.7
SHROOM1-201ENST00000319854 TRAK2O60296 914 aa19.45■□□□□ 0.7
SHROOM1-201ENST00000319854 NLRP6P59044 892 aa19.45■□□□□ 0.7
SHROOM1-201ENST00000319854 AAMPQ13685 434 aa19.45■□□□□ 0.7
SHROOM1-201ENST00000319854 ALDH1L2Q3SY69 923 aa19.45■□□□□ 0.7
SHROOM1-201ENST00000319854 RRP9O43818 475 aaKnown RBP19.44■□□□□ 0.7
SHROOM1-201ENST00000319854 KCNA6P17658 529 aa19.44■□□□□ 0.7
SHROOM1-201ENST00000319854 NECTIN2Q92692 538 aa19.44■□□□□ 0.7
SHROOM1-201ENST00000319854 MAP3K19Q56UN5 1328 aa19.43■□□□□ 0.7
SHROOM1-201ENST00000319854 LMOD3Q0VAK6 560 aa19.43■□□□□ 0.7
SHROOM1-201ENST00000319854 CDC42BPGQ6DT37 1551 aa19.42■□□□□ 0.7
SHROOM1-201ENST00000319854 HDAC1Q13547 482 aaPredicted RBP19.42■□□□□ 0.7
SHROOM1-201ENST00000319854 SIRT1Q96EB6 747 aa19.42■□□□□ 0.7
SHROOM1-201ENST00000319854 AATKQ6ZMQ8 1374 aa19.42■□□□□ 0.7
SHROOM1-201ENST00000319854 CDK12Q9NYV4 1490 aaPredicted RBP19.41■□□□□ 0.7
SHROOM1-201ENST00000319854 THEMISQ8N1K5 641 aaPredicted RBP19.41■□□□□ 0.7
SHROOM1-201ENST00000319854 ZBTB7BO15156 539 aaPredicted RBP19.41■□□□□ 0.7
SHROOM1-201ENST00000319854 PLEKHG1Q9ULL1 1385 aa19.41■□□□□ 0.7
SHROOM1-201ENST00000319854 ZNF853P0CG23 659 aa19.4■□□□□ 0.7
SHROOM1-201ENST00000319854 PLEKHG3A1L390 1219 aa19.4■□□□□ 0.7
SHROOM1-201ENST00000319854 TECPR2O15040 1411 aa19.4■□□□□ 0.7
SHROOM1-201ENST00000319854 USHBP1Q8N6Y0 703 aa19.39■□□□□ 0.69
SHROOM1-201ENST00000319854 UBR1Q8IWV7 1749 aa19.39■□□□□ 0.69
SHROOM1-201ENST00000319854 MRE11P49959 708 aa19.39■□□□□ 0.69
SHROOM1-201ENST00000319854 GRPEL1Q9HAV7 217 aa19.39■□□□□ 0.69
SHROOM1-201ENST00000319854 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.39■□□□□ 0.69
SHROOM1-201ENST00000319854 USP6P35125 1406 aa19.38■□□□□ 0.69
SHROOM1-201ENST00000319854 ESPNB1AK53 854 aa19.38■□□□□ 0.69
SHROOM1-201ENST00000319854 SLC4A10Q6U841 1118 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms