RNA–Protein interactions for RNA: ENST00000318130.12

EDEM3-201, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EDEM3, Length 6,898 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-201ENST00000318130 H0YHG0 523 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 EPS15P42566 896 aa16.56■□□□□ 0.24
EDEM3-201ENST00000318130 SDF4Q9BRK5 362 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 ERBINQ96RT1 1412 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 TTLL5Q6EMB2 1281 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 GRPEL1Q9HAV7 217 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 LETM1O95202 739 aaPredicted RBP16.55■□□□□ 0.24
EDEM3-201ENST00000318130 USP5P45974 858 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 CDR1P51861 262 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 POGZQ7Z3K3 1410 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 GNAI1P63096 354 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 MPNDQ8N594 471 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 TMOD3Q9NYL9 352 aa16.55■□□□□ 0.24
EDEM3-201ENST00000318130 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
EDEM3-201ENST00000318130 PRKCSHP14314 528 aaPredicted RBP16.54■□□□□ 0.24
EDEM3-201ENST00000318130 SPC24Q8NBT2 197 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 CA8P35219 290 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 CT47A1Q5JQC4 288 aaPredicted RBP16.54■□□□□ 0.24
EDEM3-201ENST00000318130 SLC4A2P04920 1241 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 RAI14Q9P0K7 980 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 MYOM3Q5VTT5 1437 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
EDEM3-201ENST00000318130 OLFM4Q6UX06 510 aa16.53■□□□□ 0.24
EDEM3-201ENST00000318130 AKNAQ7Z591 1439 aa16.53■□□□□ 0.24
EDEM3-201ENST00000318130 NEK4P51957 841 aa16.53■□□□□ 0.24
EDEM3-201ENST00000318130 ERC2O15083 957 aa16.53■□□□□ 0.24
EDEM3-201ENST00000318130 HDGFL1Q5TGJ6 251 aa16.53■□□□□ 0.24
EDEM3-201ENST00000318130 BRD4O60885 1362 aaPredicted RBP16.52■□□□□ 0.24
EDEM3-201ENST00000318130 ANKRD50Q9ULJ7 1429 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 UQCRHLA0A096LP55 91 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 SMC2O95347 1197 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 UQCRHP07919 91 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 ODF2Q5BJF6 829 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 CCDC158Q5M9N0 1113 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
EDEM3-201ENST00000318130 CAGE1Q8TC20 777 aa16.52■□□□□ 0.23
EDEM3-201ENST00000318130 GPTP24298 496 aa16.52■□□□□ 0.23
EDEM3-201ENST00000318130 CCDC57Q2TAC2 916 aa16.52■□□□□ 0.23
EDEM3-201ENST00000318130 DCTN1Q14203 1278 aa16.51■□□□□ 0.23
EDEM3-201ENST00000318130 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
EDEM3-201ENST00000318130 FIBPO43427 364 aa16.51■□□□□ 0.23
EDEM3-201ENST00000318130 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
EDEM3-201ENST00000318130 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
EDEM3-201ENST00000318130 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
EDEM3-201ENST00000318130 JARID2Q92833 1246 aaPredicted RBP16.5■□□□□ 0.23
EDEM3-201ENST00000318130 KRT18P05783 430 aaKnown RBP16.5■□□□□ 0.23
EDEM3-201ENST00000318130 RABEP1Q15276 862 aa16.5■□□□□ 0.23
EDEM3-201ENST00000318130 SAFBQ15424 915 aaKnown RBP eCLIP16.5■□□□□ 0.23
EDEM3-201ENST00000318130 FMNL2Q96PY5 1086 aa16.5■□□□□ 0.23
EDEM3-201ENST00000318130 NOB1Q9ULX3 412 aaKnown RBP16.5■□□□□ 0.23
EDEM3-201ENST00000318130 HSP90AB4PQ58FF6 505 aa16.5■□□□□ 0.23
EDEM3-201ENST00000318130 CFTRP13569 1480 aa16.5■□□□□ 0.23
EDEM3-201ENST00000318130 CDK5RAP3Q96JB5 506 aa16.49■□□□□ 0.23
EDEM3-201ENST00000318130 RRP9O43818 475 aaKnown RBP16.49■□□□□ 0.23
EDEM3-201ENST00000318130 RPGRQ92834 1020 aaKnown RBP16.49■□□□□ 0.23
EDEM3-201ENST00000318130 NCOA2Q15596 1464 aa16.49■□□□□ 0.23
EDEM3-201ENST00000318130 ESPNB1AK53 854 aa16.49■□□□□ 0.23
EDEM3-201ENST00000318130 RDXP35241 583 aaKnown RBP16.49■□□□□ 0.23
EDEM3-201ENST00000318130 LEKR1Q6ZMV7 388 aa16.49■□□□□ 0.23
EDEM3-201ENST00000318130 PPP6R1Q9UPN7 881 aa16.48■□□□□ 0.23
EDEM3-201ENST00000318130 EXOSC9Q06265 439 aaKnown RBP16.48■□□□□ 0.23
EDEM3-201ENST00000318130 MCM10Q7L590 875 aa16.48■□□□□ 0.23
EDEM3-201ENST00000318130 SLC3A2P08195 630 aaKnown RBP16.47■□□□□ 0.23
EDEM3-201ENST00000318130 BRMS1Q9HCU9 246 aa16.47■□□□□ 0.23
EDEM3-201ENST00000318130 KINO60870 393 aaKnown RBP16.47■□□□□ 0.23
EDEM3-201ENST00000318130 BRPF1P55201 1214 aaPredicted RBP16.47■□□□□ 0.23
EDEM3-201ENST00000318130 BCAR3O75815 825 aa16.47■□□□□ 0.23
EDEM3-201ENST00000318130 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
EDEM3-201ENST00000318130 PSMA5P28066 241 aa16.47■□□□□ 0.23
EDEM3-201ENST00000318130 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
EDEM3-201ENST00000318130 TTC16Q8NEE8 873 aa16.47■□□□□ 0.23
EDEM3-201ENST00000318130 NUDT16Q96DE0 195 aaKnown RBP16.46■□□□□ 0.23
EDEM3-201ENST00000318130 LRP2BPQ9P2M1 347 aa16.46■□□□□ 0.23
EDEM3-201ENST00000318130 CABLES1Q8TDN4 633 aa16.46■□□□□ 0.23
EDEM3-201ENST00000318130 CNTROBQ8N137 903 aa16.46■□□□□ 0.23
EDEM3-201ENST00000318130 THUMPD2Q9BTF0 503 aaKnown RBP16.46■□□□□ 0.23
EDEM3-201ENST00000318130 CCDC112Q8NEF3 446 aa16.46■□□□□ 0.23
EDEM3-201ENST00000318130 CCDC191Q8NCU4 936 aa16.46■□□□□ 0.22
EDEM3-201ENST00000318130 PODXL2Q9NZ53 605 aa16.46■□□□□ 0.22
EDEM3-201ENST00000318130 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 FYCO1Q9BQS8 1478 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
EDEM3-201ENST00000318130 RBM26Q5T8P6 1007 aaKnown RBP16.45■□□□□ 0.22
EDEM3-201ENST00000318130 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 KAT6BQ8WYB5 2073 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 TCP11L2Q8N4U5 519 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 TSPYL1Q9H0U9 437 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 CD109Q6YHK3 1445 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 MCM2P49736 904 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 SCLT1Q96NL6 688 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 MYD88Q99836 296 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 NCKAP5LQ9HCH0 1330 aa16.45■□□□□ 0.22
EDEM3-201ENST00000318130 AXDND1Q5T1B0 1012 aaPredicted RBP16.45■□□□□ 0.22
EDEM3-201ENST00000318130 CCP110O43303 1012 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 KRT28Q7Z3Y7 464 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 MCM4P33991 863 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
EDEM3-201ENST00000318130 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 FGD6Q6ZV73 1430 aa16.44■□□□□ 0.22
EDEM3-201ENST00000318130 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms