RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
CPNE1-201ENST00000317677 USP31Q70CQ4 1352 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 B4GALNT3Q6L9W6 998 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 RSPH6AQ9H0K4 717 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 USP54Q70EL1 1684 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 E9PSI1 815 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 IL13P35225 146 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 CCDC27Q2M243 656 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 C19orf44Q9H6X5 657 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 SLAIN2Q9P270 581 aa16.95■□□□□ 0.3
CPNE1-201ENST00000317677 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
CPNE1-201ENST00000317677 PLIN1O60240 522 aa16.93■□□□□ 0.3
CPNE1-201ENST00000317677 ATF3P18847 181 aa16.93■□□□□ 0.3
CPNE1-201ENST00000317677 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
CPNE1-201ENST00000317677 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
CPNE1-201ENST00000317677 NGDNQ8NEJ9 315 aaKnown RBP16.93■□□□□ 0.3
CPNE1-201ENST00000317677 TTC21AQ8NDW8 1320 aa16.93■□□□□ 0.3
CPNE1-201ENST00000317677 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
CPNE1-201ENST00000317677 WDR63Q8IWG1 891 aa16.91■□□□□ 0.3
CPNE1-201ENST00000317677 EXOC6Q8TAG9 804 aa16.91■□□□□ 0.3
CPNE1-201ENST00000317677 TRIM35Q9UPQ4 493 aa16.91■□□□□ 0.3
CPNE1-201ENST00000317677 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
CPNE1-201ENST00000317677 MED1Q15648 1581 aaPredicted RBP16.9■□□□□ 0.3
CPNE1-201ENST00000317677 DCCP43146 1447 aa16.89■□□□□ 0.29
CPNE1-201ENST00000317677 FCHSD2O94868 740 aa16.89■□□□□ 0.29
CPNE1-201ENST00000317677 HMOX1P09601 288 aa16.88■□□□□ 0.29
CPNE1-201ENST00000317677 PRKAR2BP31323 418 aa16.88■□□□□ 0.29
CPNE1-201ENST00000317677 C20orf194Q5TEA3 1177 aa16.88■□□□□ 0.29
CPNE1-201ENST00000317677 PHF8Q9UPP1 1060 aa16.88■□□□□ 0.29
CPNE1-201ENST00000317677 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
CPNE1-201ENST00000317677 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
CPNE1-201ENST00000317677 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
CPNE1-201ENST00000317677 PHLPP1O60346 1717 aa16.87■□□□□ 0.29
CPNE1-201ENST00000317677 EIF4A2Q14240 407 aaKnown RBP16.86■□□□□ 0.29
CPNE1-201ENST00000317677 MAP3K19Q56UN5 1328 aa16.85■□□□□ 0.29
CPNE1-201ENST00000317677 SOX12O15370 315 aa16.85■□□□□ 0.29
CPNE1-201ENST00000317677 NEFMP07197 916 aa16.85■□□□□ 0.29
CPNE1-201ENST00000317677 BCAR3O75815 825 aa16.84■□□□□ 0.29
CPNE1-201ENST00000317677 HSP90AB2PQ58FF8 381 aa16.84■□□□□ 0.29
CPNE1-201ENST00000317677 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
CPNE1-201ENST00000317677 RIPK4P57078 832 aa16.84■□□□□ 0.29
CPNE1-201ENST00000317677 GLIPR1L2Q4G1C9 344 aa16.84■□□□□ 0.29
CPNE1-201ENST00000317677 NUTM2GQ5VZR2 741 aa16.83■□□□□ 0.28
CPNE1-201ENST00000317677 AEBP1Q8IUX7 1158 aa16.82■□□□□ 0.28
CPNE1-201ENST00000317677 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
CPNE1-201ENST00000317677 NLRP6P59044 892 aa16.82■□□□□ 0.28
CPNE1-201ENST00000317677 ESCO1Q5FWF5 840 aa16.82■□□□□ 0.28
CPNE1-201ENST00000317677 ORAI2Q96SN7 254 aa16.82■□□□□ 0.28
CPNE1-201ENST00000317677 SBNO1A3KN83 1393 aa16.82■□□□□ 0.28
CPNE1-201ENST00000317677 TRPM3Q9HCF6 1732 aaPredicted RBP16.82■□□□□ 0.28
CPNE1-201ENST00000317677 GSE1Q14687 1217 aa16.81■□□□□ 0.28
CPNE1-201ENST00000317677 ILDR2Q71H61 639 aa16.81■□□□□ 0.28
CPNE1-201ENST00000317677 TSR2Q969E8 191 aaKnown RBP16.81■□□□□ 0.28
CPNE1-201ENST00000317677 LTN1O94822 1766 aa16.81■□□□□ 0.28
CPNE1-201ENST00000317677 NFE2L2Q16236 605 aa16.8■□□□□ 0.28
CPNE1-201ENST00000317677 FAM43AQ8N2R8 423 aa16.8■□□□□ 0.28
CPNE1-201ENST00000317677 FLT4P35916 1363 aa16.8■□□□□ 0.28
CPNE1-201ENST00000317677 NFAT5O94916 1531 aa16.8■□□□□ 0.28
CPNE1-201ENST00000317677 MST1RQ04912 1400 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 IL16Q14005 1332 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 AHDC1Q5TGY3 1603 aaPredicted RBP16.79■□□□□ 0.28
CPNE1-201ENST00000317677 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 JCADQ9P266 1359 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 BRPF3Q9ULD4 1205 aa16.79■□□□□ 0.28
CPNE1-201ENST00000317677 RARSP54136 660 aaKnown RBP16.78■□□□□ 0.28
CPNE1-201ENST00000317677 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
CPNE1-201ENST00000317677 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
CPNE1-201ENST00000317677 COL16A1Q07092 1604 aaPredicted RBP16.78■□□□□ 0.28
CPNE1-201ENST00000317677 MYH16Q9H6N6 1097 aa16.78■□□□□ 0.28
CPNE1-201ENST00000317677 SULT6B1Q6IMI4 303 aa16.77■□□□□ 0.28
CPNE1-201ENST00000317677 THUMPD2Q9BTF0 503 aaKnown RBP16.77■□□□□ 0.27
CPNE1-201ENST00000317677 ARHGEF10O15013 1369 aa16.76■□□□□ 0.27
CPNE1-201ENST00000317677 EXOSC9Q06265 439 aaKnown RBP16.75■□□□□ 0.27
CPNE1-201ENST00000317677 FOXO3O43524 673 aa16.75■□□□□ 0.27
CPNE1-201ENST00000317677 HOXC9P31274 260 aa16.75■□□□□ 0.27
CPNE1-201ENST00000317677 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
CPNE1-201ENST00000317677 PSME1Q06323 249 aa16.75■□□□□ 0.27
CPNE1-201ENST00000317677 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-201ENST00000317677 KDRP35968 1356 aa16.74■□□□□ 0.27
CPNE1-201ENST00000317677 KIF24Q5T7B8 1368 aa16.74■□□□□ 0.27
CPNE1-201ENST00000317677 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
CPNE1-201ENST00000317677 AMPHP49418 695 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 TNNQ9UQP3 1299 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 ALS2Q96Q42 1657 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 SLIT3O75094 1523 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 NHSL1Q5SYE7 1610 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 IGSF1Q8N6C5 1336 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 SOCS7O14512 581 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 EYA1Q99502 592 aa16.73■□□□□ 0.27
CPNE1-201ENST00000317677 FAM83GA6ND36 823 aa16.72■□□□□ 0.27
CPNE1-201ENST00000317677 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
CPNE1-201ENST00000317677 SPATA31A6Q5VVP1 1343 aa16.72■□□□□ 0.27
CPNE1-201ENST00000317677 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
CPNE1-201ENST00000317677 ZNF853P0CG23 659 aa16.71■□□□□ 0.27
CPNE1-201ENST00000317677 DCTN1Q14203 1278 aa16.7■□□□□ 0.26
CPNE1-201ENST00000317677 RGPD2P0DJD1 1756 aa16.7■□□□□ 0.26
CPNE1-201ENST00000317677 RTL1A6NKG5 1358 aa16.7■□□□□ 0.26
CPNE1-201ENST00000317677 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
CPNE1-201ENST00000317677 CT47B1P0C2W7 299 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms