RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ARXQ96QS3 562 aa23.87■■□□□ 1.41
RTN4-201ENST00000317610 GRPEL1Q9HAV7 217 aa23.87■■□□□ 1.41
RTN4-201ENST00000317610 MAP2P11137 1827 aaKnown RBP23.86■■□□□ 1.41
RTN4-201ENST00000317610 HSP90AB1P08238 724 aaKnown RBP23.86■■□□□ 1.41
RTN4-201ENST00000317610 ANKRD45Q5TZF3 282 aa23.86■■□□□ 1.41
RTN4-201ENST00000317610 CABP1Q9NZU7 370 aa23.86■■□□□ 1.41
RTN4-201ENST00000317610 DLC1Q96QB1 1528 aa23.85■■□□□ 1.41
RTN4-201ENST00000317610 GBP4Q96PP9 640 aa23.85■■□□□ 1.41
RTN4-201ENST00000317610 IFT57Q9NWB7 429 aa23.85■■□□□ 1.41
RTN4-201ENST00000317610 ZNF853P0CG23 659 aa23.84■■□□□ 1.41
RTN4-201ENST00000317610 PTMSP20962 102 aa23.84■■□□□ 1.41
RTN4-201ENST00000317610 TBC1D9Q6ZT07 1266 aa23.83■■□□□ 1.41
RTN4-201ENST00000317610 GNAI1P63096 354 aa23.83■■□□□ 1.4
RTN4-201ENST00000317610 SIRT2Q8IXJ6 389 aa23.83■■□□□ 1.4
RTN4-201ENST00000317610 PHACTR3Q96KR7 559 aa23.83■■□□□ 1.4
RTN4-201ENST00000317610 SKOR2Q2VWA4 1001 aaPredicted RBP23.82■■□□□ 1.4
RTN4-201ENST00000317610 TSPYL6Q8N831 410 aa23.81■■□□□ 1.4
RTN4-201ENST00000317610 YEATS2Q9ULM3 1422 aa23.81■■□□□ 1.4
RTN4-201ENST00000317610 K7ELQ4 463 aaPredicted RBP23.81■■□□□ 1.4
RTN4-201ENST00000317610 KIF24Q5T7B8 1368 aa23.8■■□□□ 1.4
RTN4-201ENST00000317610 CDK12Q9NYV4 1490 aaPredicted RBP23.8■■□□□ 1.4
RTN4-201ENST00000317610 CD2BP2O95400 341 aaKnown RBP23.8■■□□□ 1.4
RTN4-201ENST00000317610 C1orf115Q9H7X2 142 aa23.8■■□□□ 1.4
RTN4-201ENST00000317610 DLG5Q8TDM6 1919 aa23.79■■□□□ 1.4
RTN4-201ENST00000317610 MBIPQ9NS73 344 aa23.78■■□□□ 1.4
RTN4-201ENST00000317610 IL13P35225 146 aa23.78■■□□□ 1.4
RTN4-201ENST00000317610 CLEC17AQ6ZS10 378 aa23.78■■□□□ 1.4
RTN4-201ENST00000317610 THUMPD2Q9BTF0 503 aaKnown RBP23.78■■□□□ 1.4
RTN4-201ENST00000317610 KNDC1Q76NI1 1749 aa23.77■■□□□ 1.4
RTN4-201ENST00000317610 UBE2Q2Q8WVN8 375 aa23.77■■□□□ 1.4
RTN4-201ENST00000317610 CDC45O75419 566 aa23.77■■□□□ 1.4
RTN4-201ENST00000317610 SENP3Q9H4L4 574 aaPredicted RBP23.77■■□□□ 1.4
RTN4-201ENST00000317610 SETD1AO15047 1707 aaKnown RBP23.76■■□□□ 1.39
RTN4-201ENST00000317610 HMOX1P09601 288 aa23.76■■□□□ 1.39
RTN4-201ENST00000317610 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.76■■□□□ 1.391e-7■■■□□ 14.8
RTN4-201ENST00000317610 API5Q9BZZ5 524 aaKnown RBP23.76■■□□□ 1.39
RTN4-201ENST00000317610 CPSF1Q10570 1443 aaKnown RBP23.75■■□□□ 1.39
RTN4-201ENST00000317610 AATKQ6ZMQ8 1374 aa23.75■■□□□ 1.39
RTN4-201ENST00000317610 RIMBP3CA6NJZ7 1639 aa23.75■■□□□ 1.39
RTN4-201ENST00000317610 RIMBP3BA6NNM3 1639 aa23.75■■□□□ 1.39
RTN4-201ENST00000317610 RIMBP3Q9UFD9 1639 aa23.75■■□□□ 1.39
RTN4-201ENST00000317610 FBLN1P23142 703 aa23.75■■□□□ 1.39
RTN4-201ENST00000317610 EDC4Q6P2E9 1401 aaKnown RBP23.75■■□□□ 1.39
RTN4-201ENST00000317610 TWISTNBQ3B726 338 aaPredicted RBP23.75■■□□□ 1.39
RTN4-201ENST00000317610 GAS2L3Q86XJ1 694 aa23.74■■□□□ 1.39
RTN4-201ENST00000317610 CFAP44Q96MT7 982 aa23.74■■□□□ 1.39
RTN4-201ENST00000317610 LMOD3Q0VAK6 560 aa23.73■■□□□ 1.39
RTN4-201ENST00000317610 HSP90AA1P07900 732 aaKnown RBP23.72■■□□□ 1.39
RTN4-201ENST00000317610 GSPT1P15170 499 aaKnown RBP23.72■■□□□ 1.39
RTN4-201ENST00000317610 GAS2L2Q8NHY3 880 aa23.72■■□□□ 1.39
RTN4-201ENST00000317610 RBM42Q9BTD8 480 aaKnown RBP23.72■■□□□ 1.39
RTN4-201ENST00000317610 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
RTN4-201ENST00000317610 EMILIN1Q9Y6C2 1016 aa23.71■■□□□ 1.39
RTN4-201ENST00000317610 PLEKHM2Q8IWE5 1019 aa23.71■■□□□ 1.39
RTN4-201ENST00000317610 C8orf58Q8NAV2 365 aa23.71■■□□□ 1.39
RTN4-201ENST00000317610 DCTPP1Q9H773 170 aa23.71■■□□□ 1.39
RTN4-201ENST00000317610 ESPNB1AK53 854 aa23.7■■□□□ 1.38
RTN4-201ENST00000317610 IBTKQ9P2D0 1353 aaPredicted RBP23.7■■□□□ 1.38
RTN4-201ENST00000317610 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
RTN4-201ENST00000317610 SSFA2P28290 1259 aa23.68■■□□□ 1.38
RTN4-201ENST00000317610 FBXO31Q5XUX0 539 aaPredicted RBP23.68■■□□□ 1.38
RTN4-201ENST00000317610 MON2Q7Z3U7 1717 aa23.68■■□□□ 1.38
RTN4-201ENST00000317610 RABEP1Q15276 862 aa23.68■■□□□ 1.38
RTN4-201ENST00000317610 FOXD4L1Q9NU39 408 aa23.67■■□□□ 1.38
RTN4-201ENST00000317610 TTC22Q5TAA0 569 aa23.67■■□□□ 1.38
RTN4-201ENST00000317610 INTS3Q68E01 1043 aaKnown RBP23.67■■□□□ 1.38
RTN4-201ENST00000317610 WAPLQ7Z5K2 1190 aa23.67■■□□□ 1.38
RTN4-201ENST00000317610 ERBB4Q15303 1308 aa23.67■■□□□ 1.38
RTN4-201ENST00000317610 ATP10DQ9P241 1426 aa23.66■■□□□ 1.38
RTN4-201ENST00000317610 GOLGA6L22H0YM25 854 aa23.66■■□□□ 1.38
RTN4-201ENST00000317610 KLHL40Q2TBA0 621 aa23.65■■□□□ 1.38
RTN4-201ENST00000317610 NAP1L5Q96NT1 182 aaPredicted RBP23.65■■□□□ 1.38
RTN4-201ENST00000317610 A2ML1A8K2U0 1454 aa23.65■■□□□ 1.38
RTN4-201ENST00000317610 BAG4O95429 457 aaKnown RBP23.65■■□□□ 1.38
RTN4-201ENST00000317610 NME9Q86XW9 330 aa23.65■■□□□ 1.38
RTN4-201ENST00000317610 NRKQ7Z2Y5 1582 aa23.64■■□□□ 1.38
RTN4-201ENST00000317610 RGS12O14924 1447 aa23.64■■□□□ 1.37
RTN4-201ENST00000317610 ANKRD44Q8N8A2 993 aa23.63■■□□□ 1.37
RTN4-201ENST00000317610 USP26Q9BXU7 913 aa23.62■■□□□ 1.37
RTN4-201ENST00000317610 AKAP12Q02952 1782 aa23.62■■□□□ 1.37
RTN4-201ENST00000317610 C3P01024 1663 aa23.62■■□□□ 1.37
RTN4-201ENST00000317610 CPS1P31327 1500 aa23.62■■□□□ 1.37
RTN4-201ENST00000317610 TRIM44Q96DX7 344 aaPredicted RBP23.62■■□□□ 1.37
RTN4-201ENST00000317610 WASLO00401 505 aaPredicted RBP23.61■■□□□ 1.37
RTN4-201ENST00000317610 CYP2E1P05181 493 aaPredicted RBP23.61■■□□□ 1.37
RTN4-201ENST00000317610 PPP1R9BQ96SB3 815 aa23.61■■□□□ 1.37
RTN4-201ENST00000317610 OSCARQ8IYS5 282 aa23.61■■□□□ 1.37
RTN4-201ENST00000317610 STAG3Q9UJ98 1225 aa23.61■■□□□ 1.37
RTN4-201ENST00000317610 NRXN3Q9Y4C0 1643 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 FAM83GA6ND36 823 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 RPAP2Q8IXW5 612 aaPredicted RBP23.6■■□□□ 1.37
RTN4-201ENST00000317610 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 NUCB2P80303 420 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 CCDC173Q0VFZ6 552 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 ZRANB1Q9UGI0 708 aa23.6■■□□□ 1.37
RTN4-201ENST00000317610 AK9Q5TCS8 1911 aa23.59■■□□□ 1.37
RTN4-201ENST00000317610 COG3Q96JB2 828 aa23.59■■□□□ 1.37
RTN4-201ENST00000317610 HAP1P54257 671 aaPredicted RBP23.58■■□□□ 1.37
RTN4-201ENST00000317610 ITSN1Q15811 1721 aa23.57■■□□□ 1.36
RTN4-201ENST00000317610 CEP85Q6P2H3 762 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms