RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 HSP90B1P14625 803 aaKnown RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 HDGFL2Q7Z4V5 671 aaPredicted RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 SYCP1Q15431 976 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 STK31Q9BXU1 1019 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 NPC1L1Q9UHC9 1359 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 H0YHG0 523 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 GBP2P32456 591 aaPredicted RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 BMS1Q14692 1282 aaKnown RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 TCOF1Q13428 1488 aaKnown RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 PANK3Q9H999 370 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 NOL7Q9UMY1 257 aaKnown RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 NUTM1Q86Y26 1132 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 COG6Q9Y2V7 657 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 CPLX2Q6PUV4 134 aaKnown RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 OGFRQ9NZT2 677 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 DACH1Q9UI36 760 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 TUBB2AQ13885 445 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 NBPF8Q3BBV2 869 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC91Q7Z6B0 441 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 TUBB2BQ9BVA1 445 aa5.36□□□□□ -1.55
CNOT1-201ENST00000317147 NAP1L2Q9ULW6 460 aaPredicted RBP5.36□□□□□ -1.55
CNOT1-201ENST00000317147 YEATS2Q9ULM3 1422 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 PRRC2BQ5JSZ5 2229 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC183Q5T5S1 534 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 ELP1O95163 1332 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 ERC2O15083 957 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 HOMER1Q86YM7 354 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 UGGT2Q9NYU1 1516 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 ZSCAN31Q96LW9 406 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 TBC1D32Q96NH3 1257 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 TARBP1Q13395 1621 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 DHX16O60231 1041 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 TMCO3Q6UWJ1 677 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 CFAP45Q9UL16 551 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 PLXNC1O60486 1568 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC88AQ3V6T2 1871 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 SMARCE1Q969G3 411 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 SCAND2PQ9GZW5 306 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 FAM135AQ9P2D6 1515 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 HMGB1P1B2RPK0 211 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 OS9Q13438 667 aaPredicted RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 UHRF1BP1LA0JNW5 1464 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 URB2Q14146 1524 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 ASXL1Q8IXJ9 1541 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 MYO1BO43795 1136 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 KINO60870 393 aaKnown RBP5.35□□□□□ -1.55
CNOT1-201ENST00000317147 BMP2KLQ5H9B9 411 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 KIAA1328Q86T90 577 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 CCDC83Q8IWF9 413 aa5.35□□□□□ -1.55
CNOT1-201ENST00000317147 PIK3C2GO75747 1445 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 BLMP54132 1417 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-201ENST00000317147 GOLGA6L10A6NI86 522 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 GNAI1P63096 354 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 SF3B2Q13435 895 aaKnown RBP5.34□□□□□ -1.55
CNOT1-201ENST00000317147 SPATS2Q86XZ4 545 aaKnown RBP5.34□□□□□ -1.55
CNOT1-201ENST00000317147 ZNF396Q96N95 335 aaPredicted RBP5.34□□□□□ -1.55
CNOT1-201ENST00000317147 ERBINQ96RT1 1412 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 GAPVD1Q14C86 1478 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 ABCC2Q92887 1545 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 EVC2Q86UK5 1308 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 LAMC1P11047 1609 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 CEP57L1Q8IYX8 460 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 EHBP1Q8NDI1 1231 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 PANK1Q8TE04 598 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 RRP7AQ9Y3A4 280 aaKnown RBP5.34□□□□□ -1.55
CNOT1-201ENST00000317147 IL16Q14005 1332 aa5.34□□□□□ -1.55
CNOT1-201ENST00000317147 PARD3Q8TEW0 1356 aa5.34□□□□□ -1.56
CNOT1-201ENST00000317147 VGFO15240 615 aaPredicted RBP5.34□□□□□ -1.56
CNOT1-201ENST00000317147 ANAPC15P60006 121 aa5.34□□□□□ -1.56
CNOT1-201ENST00000317147 RRP12Q5JTH9 1297 aaKnown RBP5.34□□□□□ -1.56
CNOT1-201ENST00000317147 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.56
CNOT1-201ENST00000317147 ALDH1L2Q3SY69 923 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 GIMAP7Q8NHV1 300 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 PPP6R1Q9UPN7 881 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF644Q9H582 1327 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 H3BQV1 296 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 ZNF500O60304 480 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 TPD52L1Q16890 204 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 IFFO2Q5TF58 517 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 MKRN1Q9UHC7 482 aaKnown RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 ADAMTS8Q9UP79 889 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SPTBP11277 2137 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SHTN1A0MZ66 631 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 KRT85P78386 507 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 CCDC50Q8IVM0 306 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 KIF20BQ96Q89 1820 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 APAF1O14727 1248 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 FOXD4L6Q3SYB3 417 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 MCTP1Q6DN14 999 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 FOXD4L3Q6VB84 417 aaPredicted RBP5.33□□□□□ -1.56
CNOT1-201ENST00000317147 UBXN4Q92575 508 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 STAG3Q9UJ98 1225 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SMTNL1A8MU46 457 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 SMC5Q8IY18 1101 aa5.33□□□□□ -1.56
CNOT1-201ENST00000317147 PCM1Q15154 2024 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms