RNA–Protein interactions for RNA: ENST00000316509.10

VAMP2-201, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP2, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-201ENST00000316509 TSR2Q969E8 191 aaKnown RBP17.87■□□□□ 0.45
VAMP2-201ENST00000316509 PHACTR3Q96KR7 559 aa17.87■□□□□ 0.45
VAMP2-201ENST00000316509 BACH2Q9BYV9 841 aa17.87■□□□□ 0.45
VAMP2-201ENST00000316509 COG6Q9Y2V7 657 aa17.87■□□□□ 0.45
VAMP2-201ENST00000316509 KIF16BQ96L93 1317 aa17.86■□□□□ 0.45
VAMP2-201ENST00000316509 NUTM2FA1L443 756 aa17.86■□□□□ 0.45
VAMP2-201ENST00000316509 ZNF853P0CG23 659 aa17.86■□□□□ 0.45
VAMP2-201ENST00000316509 EIF4A2Q14240 407 aaKnown RBP17.86■□□□□ 0.45
VAMP2-201ENST00000316509 DZIP1LQ8IYY4 767 aaKnown RBP17.86■□□□□ 0.45
VAMP2-201ENST00000316509 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
VAMP2-201ENST00000316509 FMN2Q9NZ56 1722 aa17.85■□□□□ 0.45
VAMP2-201ENST00000316509 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
VAMP2-201ENST00000316509 CHD2O14647 1828 aaKnown RBP17.85■□□□□ 0.45
VAMP2-201ENST00000316509 SBNO1A3KN83 1393 aa17.85■□□□□ 0.45
VAMP2-201ENST00000316509 MVPQ14764 893 aaKnown RBP17.84■□□□□ 0.45
VAMP2-201ENST00000316509 SSH1Q8WYL5 1049 aa17.83■□□□□ 0.45
VAMP2-201ENST00000316509 CFAP44Q96MT7 982 aa17.83■□□□□ 0.45
VAMP2-201ENST00000316509 ARHGEF10O15013 1369 aa17.83■□□□□ 0.44
VAMP2-201ENST00000316509 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.44
VAMP2-201ENST00000316509 ATF7IPQ6VMQ6 1270 aa17.83■□□□□ 0.44
VAMP2-201ENST00000316509 FTSJ3Q8IY81 847 aaKnown RBP17.83■□□□□ 0.44
VAMP2-201ENST00000316509 FLT4P35916 1363 aa17.82■□□□□ 0.44
VAMP2-201ENST00000316509 USP54Q70EL1 1684 aa17.82■□□□□ 0.44
VAMP2-201ENST00000316509 ARHGAP45Q92619 1136 aa17.81■□□□□ 0.44
VAMP2-201ENST00000316509 CHMP4BQ9H444 224 aaKnown RBP17.81■□□□□ 0.44
VAMP2-201ENST00000316509 RWDD1Q9H446 243 aaPredicted RBP17.81■□□□□ 0.44
VAMP2-201ENST00000316509 DDX19BQ9UMR2 479 aa17.81■□□□□ 0.44
VAMP2-201ENST00000316509 RLBP1P12271 317 aa17.8■□□□□ 0.44
VAMP2-201ENST00000316509 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
VAMP2-201ENST00000316509 BCL2L13Q9BXK5 485 aa17.8■□□□□ 0.44
VAMP2-201ENST00000316509 NPHP4O75161 1426 aaPredicted RBP17.8■□□□□ 0.44
VAMP2-201ENST00000316509 ANP32EQ9BTT0 268 aa17.8■□□□□ 0.44
VAMP2-201ENST00000316509 IGHDP01880 384 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 MAP3K19Q56UN5 1328 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 RGPD1P0DJD0 1748 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 MSH5O43196 834 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 VAMP4O75379 141 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
VAMP2-201ENST00000316509 ADGRL3Q9HAR2 1447 aa17.78■□□□□ 0.44
VAMP2-201ENST00000316509 TRIM27P14373 513 aa17.78■□□□□ 0.44
VAMP2-201ENST00000316509 NOB1Q9ULX3 412 aaKnown RBP17.78■□□□□ 0.44
VAMP2-201ENST00000316509 NLRP6P59044 892 aa17.77■□□□□ 0.44
VAMP2-201ENST00000316509 FAM161AQ3B820 660 aa17.77■□□□□ 0.44
VAMP2-201ENST00000316509 IPO9Q96P70 1041 aaKnown RBP17.77■□□□□ 0.44
VAMP2-201ENST00000316509 PEAK1Q9H792 1746 aa17.77■□□□□ 0.44
VAMP2-201ENST00000316509 AMPHP49418 695 aa17.77■□□□□ 0.43
VAMP2-201ENST00000316509 RGPD8O14715 1765 aaPredicted RBP17.77■□□□□ 0.43
VAMP2-201ENST00000316509 LAS1LQ9Y4W2 734 aaKnown RBP17.76■□□□□ 0.43
VAMP2-201ENST00000316509 PIK3C2AO00443 1686 aa17.76■□□□□ 0.43
VAMP2-201ENST00000316509 KDRP35968 1356 aa17.76■□□□□ 0.43
VAMP2-201ENST00000316509 MBIPQ9NS73 344 aa17.76■□□□□ 0.43
VAMP2-201ENST00000316509 HTATSF1O43719 755 aaKnown RBP17.75■□□□□ 0.43
VAMP2-201ENST00000316509 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
VAMP2-201ENST00000316509 PCDHB15Q9Y5E8 787 aa17.74■□□□□ 0.43
VAMP2-201ENST00000316509 RTL1A6NKG5 1358 aa17.74■□□□□ 0.43
VAMP2-201ENST00000316509 IGSF1Q8N6C5 1336 aa17.74■□□□□ 0.43
VAMP2-201ENST00000316509 HDAC1Q13547 482 aaPredicted RBP17.74■□□□□ 0.43
VAMP2-201ENST00000316509 MRPL50Q8N5N7 158 aaKnown RBP17.74■□□□□ 0.43
VAMP2-201ENST00000316509 TNNQ9UQP3 1299 aa17.74■□□□□ 0.43
VAMP2-201ENST00000316509 ABTB2Q8N961 1025 aa17.73■□□□□ 0.43
VAMP2-201ENST00000316509 CHL1O00533 1208 aa17.73■□□□□ 0.43
VAMP2-201ENST00000316509 TWISTNBQ3B726 338 aaPredicted RBP17.73■□□□□ 0.43
VAMP2-201ENST00000316509 AEBP1Q8IUX7 1158 aa17.73■□□□□ 0.43
VAMP2-201ENST00000316509 GAS2L2Q8NHY3 880 aa17.73■□□□□ 0.43
VAMP2-201ENST00000316509 KIAA0232Q92628 1395 aa17.73■□□□□ 0.43
VAMP2-201ENST00000316509 DLG5Q8TDM6 1919 aa17.72■□□□□ 0.43
VAMP2-201ENST00000316509 NWD1Q149M9 1564 aa17.72■□□□□ 0.43
VAMP2-201ENST00000316509 THUMPD2Q9BTF0 503 aaKnown RBP17.72■□□□□ 0.43
VAMP2-201ENST00000316509 ITPRIPQ8IWB1 547 aa17.71■□□□□ 0.43
VAMP2-201ENST00000316509 HOXC9P31274 260 aa17.7■□□□□ 0.42
VAMP2-201ENST00000316509 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
VAMP2-201ENST00000316509 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
VAMP2-201ENST00000316509 EYA1Q99502 592 aa17.7■□□□□ 0.42
VAMP2-201ENST00000316509 ZBTB40Q9NUA8 1239 aa17.7■□□□□ 0.42
VAMP2-201ENST00000316509 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
VAMP2-201ENST00000316509 TMEM57Q8N5G2 664 aa17.69■□□□□ 0.42
VAMP2-201ENST00000316509 DDRGK1Q96HY6 314 aa17.69■□□□□ 0.42
VAMP2-201ENST00000316509 PSME1Q06323 249 aa17.69■□□□□ 0.42
VAMP2-201ENST00000316509 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
VAMP2-201ENST00000316509 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
VAMP2-201ENST00000316509 RGS3P49796 1198 aa17.68■□□□□ 0.42
VAMP2-201ENST00000316509 C8orf34Q49A92 452 aa17.68■□□□□ 0.42
VAMP2-201ENST00000316509 FAM83GA6ND36 823 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
VAMP2-201ENST00000316509 TSPYL6Q8N831 410 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 SOX12O15370 315 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 C8orf58Q8NAV2 365 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 CRB1P82279 1406 aa17.67■□□□□ 0.42
VAMP2-201ENST00000316509 MARF1Q9Y4F3 1742 aaKnown RBP17.67■□□□□ 0.42
VAMP2-201ENST00000316509 ESCO1Q5FWF5 840 aa17.66■□□□□ 0.42
VAMP2-201ENST00000316509 SKAP1Q86WV1 359 aa17.66■□□□□ 0.42
VAMP2-201ENST00000316509 IP6K1Q92551 441 aa17.66■□□□□ 0.42
VAMP2-201ENST00000316509 MTHFSDQ2M296 383 aaKnown RBP17.66■□□□□ 0.42
VAMP2-201ENST00000316509 SOS1Q07889 1333 aaPredicted RBP17.66■□□□□ 0.42
VAMP2-201ENST00000316509 NCOA3Q9Y6Q9 1424 aa17.65■□□□□ 0.42
VAMP2-201ENST00000316509 DCTN1Q14203 1278 aa17.65■□□□□ 0.42
VAMP2-201ENST00000316509 PDZRN3Q9UPQ7 1066 aa17.65■□□□□ 0.42
VAMP2-201ENST00000316509 ABCC4O15439 1325 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms