RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 FMN2Q9NZ56 1722 aa19.03■□□□□ 0.64
CHFR-202ENST00000315585 ZNF428Q96B54 188 aa19.02■□□□□ 0.64
CHFR-202ENST00000315585 CALD1Q05682 793 aaKnown RBP19.02■□□□□ 0.63
CHFR-202ENST00000315585 MVPQ14764 893 aaKnown RBP19.02■□□□□ 0.63
CHFR-202ENST00000315585 DZIP1LQ8IYY4 767 aaKnown RBP19.02■□□□□ 0.63
CHFR-202ENST00000315585 IPO8O15397 1037 aaKnown RBP19.01■□□□□ 0.63
CHFR-202ENST00000315585 SSH2Q76I76 1423 aa19.01■□□□□ 0.63
CHFR-202ENST00000315585 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
CHFR-202ENST00000315585 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
CHFR-202ENST00000315585 RIPK4P57078 832 aa19■□□□□ 0.63
CHFR-202ENST00000315585 SMC4Q9NTJ3 1288 aa18.99■□□□□ 0.63
CHFR-202ENST00000315585 ZRANB1Q9UGI0 708 aa18.99■□□□□ 0.63
CHFR-202ENST00000315585 UPF2Q9HAU5 1272 aaKnown RBP18.99■□□□□ 0.63
CHFR-202ENST00000315585 DDX19BQ9UMR2 479 aa18.99■□□□□ 0.63
CHFR-202ENST00000315585 TRIM35Q9UPQ4 493 aa18.99■□□□□ 0.63
CHFR-202ENST00000315585 EMILIN1Q9Y6C2 1016 aa18.99■□□□□ 0.63
CHFR-202ENST00000315585 KIF16BQ96L93 1317 aa18.98■□□□□ 0.63
CHFR-202ENST00000315585 CHMP4BQ9H444 224 aaKnown RBP18.98■□□□□ 0.63
CHFR-202ENST00000315585 ADGRL3Q9HAR2 1447 aa18.97■□□□□ 0.63
CHFR-202ENST00000315585 USP31Q70CQ4 1352 aa18.97■□□□□ 0.63
CHFR-202ENST00000315585 EXOSC9Q06265 439 aaKnown RBP18.96■□□□□ 0.63
CHFR-202ENST00000315585 BCL2L13Q9BXK5 485 aa18.96■□□□□ 0.63
CHFR-202ENST00000315585 RGPD8O14715 1765 aaPredicted RBP18.96■□□□□ 0.63
CHFR-202ENST00000315585 NALCNQ8IZF0 1738 aa18.96■□□□□ 0.63
CHFR-202ENST00000315585 ALDH1L2Q3SY69 923 aa18.96■□□□□ 0.63
CHFR-202ENST00000315585 RLBP1P12271 317 aa18.95■□□□□ 0.62
CHFR-202ENST00000315585 IL13P35225 146 aa18.95■□□□□ 0.62
CHFR-202ENST00000315585 NWD1Q149M9 1564 aa18.95■□□□□ 0.62
CHFR-202ENST00000315585 ATF7IPQ6VMQ6 1270 aa18.95■□□□□ 0.62
CHFR-202ENST00000315585 FBLN1P23142 703 aa18.94■□□□□ 0.62
CHFR-202ENST00000315585 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
CHFR-202ENST00000315585 PCDHB15Q9Y5E8 787 aa18.94■□□□□ 0.62
CHFR-202ENST00000315585 RRS1Q15050 365 aaKnown RBP18.94■□□□□ 0.62
CHFR-202ENST00000315585 LAS1LQ9Y4W2 734 aaKnown RBP18.94■□□□□ 0.62
CHFR-202ENST00000315585 BECN1Q14457 450 aa18.93■□□□□ 0.62
CHFR-202ENST00000315585 TSR2Q969E8 191 aaKnown RBP18.93■□□□□ 0.62
CHFR-202ENST00000315585 VIRMAQ69YN4 1812 aaKnown RBP18.93■□□□□ 0.62
CHFR-202ENST00000315585 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
CHFR-202ENST00000315585 PRKAR2BP31323 418 aa18.92■□□□□ 0.62
CHFR-202ENST00000315585 LMOD3Q0VAK6 560 aa18.92■□□□□ 0.62
CHFR-202ENST00000315585 BRPF1P55201 1214 aaPredicted RBP18.92■□□□□ 0.62
CHFR-202ENST00000315585 HDAC1Q13547 482 aaPredicted RBP18.92■□□□□ 0.62
CHFR-202ENST00000315585 C14orf37Q86TY3 774 aa18.92■□□□□ 0.62
CHFR-202ENST00000315585 PHF8Q9UPP1 1060 aa18.92■□□□□ 0.62
CHFR-202ENST00000315585 SSH1Q8WYL5 1049 aa18.91■□□□□ 0.62
CHFR-202ENST00000315585 TRIM27P14373 513 aa18.9■□□□□ 0.62
CHFR-202ENST00000315585 PDZRN3Q9UPQ7 1066 aa18.9■□□□□ 0.62
CHFR-202ENST00000315585 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
CHFR-202ENST00000315585 ITPRIPQ8IWB1 547 aa18.89■□□□□ 0.61
CHFR-202ENST00000315585 USP54Q70EL1 1684 aa18.88■□□□□ 0.61
CHFR-202ENST00000315585 KIF24Q5T7B8 1368 aa18.88■□□□□ 0.61
CHFR-202ENST00000315585 GNAI1P63096 354 aa18.88■□□□□ 0.61
CHFR-202ENST00000315585 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
CHFR-202ENST00000315585 NOB1Q9ULX3 412 aaKnown RBP18.88■□□□□ 0.61
CHFR-202ENST00000315585 PIK3C2AO00443 1686 aa18.87■□□□□ 0.61
CHFR-202ENST00000315585 HMOX1P09601 288 aa18.87■□□□□ 0.61
CHFR-202ENST00000315585 NLRP6P59044 892 aa18.87■□□□□ 0.61
CHFR-202ENST00000315585 PROSER2Q86WR7 435 aaPredicted RBP18.87■□□□□ 0.61
CHFR-202ENST00000315585 SBNO1A3KN83 1393 aa18.87■□□□□ 0.61
CHFR-202ENST00000315585 ARHGAP45Q92619 1136 aa18.86■□□□□ 0.61
CHFR-202ENST00000315585 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
CHFR-202ENST00000315585 FLT4P35916 1363 aa18.86■□□□□ 0.61
CHFR-202ENST00000315585 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
CHFR-202ENST00000315585 TNNQ9UQP3 1299 aa18.85■□□□□ 0.61
CHFR-202ENST00000315585 HAP1P54257 671 aaPredicted RBP18.85■□□□□ 0.61
CHFR-202ENST00000315585 ABTB2Q8N961 1025 aa18.85■□□□□ 0.61
CHFR-202ENST00000315585 ESCO1Q5FWF5 840 aa18.84■□□□□ 0.61
CHFR-202ENST00000315585 AMPHP49418 695 aa18.83■□□□□ 0.61
CHFR-202ENST00000315585 MAP3K19Q56UN5 1328 aa18.83■□□□□ 0.61
CHFR-202ENST00000315585 PSME1Q06323 249 aa18.83■□□□□ 0.6
CHFR-202ENST00000315585 NCOA3Q9Y6Q9 1424 aa18.83■□□□□ 0.6
CHFR-202ENST00000315585 ZBTB40Q9NUA8 1239 aa18.82■□□□□ 0.6
CHFR-202ENST00000315585 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
CHFR-202ENST00000315585 SMC5Q8IY18 1101 aa18.82■□□□□ 0.6
CHFR-202ENST00000315585 C19orf44Q9H6X5 657 aa18.82■□□□□ 0.6
CHFR-202ENST00000315585 PEAK1Q9H792 1746 aa18.82■□□□□ 0.6
CHFR-202ENST00000315585 RBM33Q96EV2 1170 aaKnown RBP18.81■□□□□ 0.6
CHFR-202ENST00000315585 PHACTR3Q96KR7 559 aa18.81■□□□□ 0.6
CHFR-202ENST00000315585 USP19O94966 1318 aa18.81■□□□□ 0.6
CHFR-202ENST00000315585 ARHGEF10O15013 1369 aa18.81■□□□□ 0.6
CHFR-202ENST00000315585 SOX12O15370 315 aa18.81■□□□□ 0.6
CHFR-202ENST00000315585 HSP90AB2PQ58FF8 381 aa18.81■□□□□ 0.6
CHFR-202ENST00000315585 SLC4A3P48751 1232 aa18.8■□□□□ 0.6
CHFR-202ENST00000315585 TMEM57Q8N5G2 664 aa18.8■□□□□ 0.6
CHFR-202ENST00000315585 SULT6B1Q6IMI4 303 aa18.79■□□□□ 0.6
CHFR-202ENST00000315585 TBC1D32Q96NH3 1257 aa18.79■□□□□ 0.6
CHFR-202ENST00000315585 CFAP44Q96MT7 982 aa18.79■□□□□ 0.6
CHFR-202ENST00000315585 RGPD1P0DJD0 1748 aa18.79■□□□□ 0.6
CHFR-202ENST00000315585 KCNH5Q8NCM2 988 aa18.78■□□□□ 0.6
CHFR-202ENST00000315585 RTL1A6NKG5 1358 aa18.78■□□□□ 0.6
CHFR-202ENST00000315585 KIF1AQ12756 1690 aa18.78■□□□□ 0.6
CHFR-202ENST00000315585 VAMP4O75379 141 aa18.77■□□□□ 0.6
CHFR-202ENST00000315585 ZNF853P0CG23 659 aa18.77■□□□□ 0.6
CHFR-202ENST00000315585 DCCP43146 1447 aa18.77■□□□□ 0.6
CHFR-202ENST00000315585 EIF5BO60841 1220 aaKnown RBP18.76■□□□□ 0.59
CHFR-202ENST00000315585 GCC1Q96CN9 775 aa18.76■□□□□ 0.59
CHFR-202ENST00000315585 MARF1Q9Y4F3 1742 aaKnown RBP18.76■□□□□ 0.59
CHFR-202ENST00000315585 SEC24BO95487 1268 aa18.75■□□□□ 0.59
CHFR-202ENST00000315585 ATF3P18847 181 aa18.75■□□□□ 0.59
CHFR-202ENST00000315585 API5Q9BZZ5 524 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms