RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 NSD3Q9BZ95 1437 aa14.3□□□□□ -0.12
AMBRA1-201ENST00000314845 KINO60870 393 aaKnown RBP14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 ANKRD1Q15327 319 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 SIL1Q9H173 461 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 SRGAP3O43295 1099 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 TMPOP42166 694 aaKnown RBP14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 CYP46A1Q9Y6A2 500 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 OFD1O75665 1012 aa14.29□□□□□ -0.12
AMBRA1-201ENST00000314845 TXLNAP40222 546 aa14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 TNNT3P45378 269 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 LAMC3Q9Y6N6 1575 aa14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 ATP2B1P20020 1258 aa14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 ZNF396Q96N95 335 aaPredicted RBP14.28□□□□□ -0.12
AMBRA1-201ENST00000314845 JMYQ8N9B5 988 aa14.27□□□□□ -0.12
AMBRA1-201ENST00000314845 LETM1O95202 739 aaPredicted RBP14.27□□□□□ -0.12
AMBRA1-201ENST00000314845 STARD3NLO95772 234 aa14.27□□□□□ -0.13
AMBRA1-201ENST00000314845 TRIM22Q8IYM9 498 aa14.27□□□□□ -0.13
AMBRA1-201ENST00000314845 ADGRL1O94910 1474 aa14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 EPS15P42566 896 aa14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 CT47A1Q5JQC4 288 aaPredicted RBP14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 WAPLQ7Z5K2 1190 aa14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 NFKBIBQ15653 356 aa14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 RSPH6AQ9H0K4 717 aa14.26□□□□□ -0.13
AMBRA1-201ENST00000314845 STK38Q15208 465 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 AACSQ86V21 672 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 CHD1LQ86WJ1 897 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 CDK5RAP3Q96JB5 506 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 PPP6R1Q9UPN7 881 aa14.25□□□□□ -0.13
AMBRA1-201ENST00000314845 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 CNKSR2Q8WXI2 1034 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 PLB1Q6P1J6 1458 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 MRE11P49959 708 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 NAP1L1P55209 391 aaKnown RBP14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 AEBP1Q8IUX7 1158 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 IFT57Q9NWB7 429 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 PHF8Q9UPP1 1060 aa14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 CCAR1Q8IX12 1150 aaKnown RBP14.24□□□□□ -0.13
AMBRA1-201ENST00000314845 PIP4K2AP48426 406 aaPredicted RBP14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 PIP4K2BP78356 416 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 CAMSAP2Q08AD1 1489 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 ABCC11Q96J66 1382 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 GRIN2AQ12879 1464 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 FKBP4Q02790 459 aaKnown RBP eCLIP14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 SLFN5Q08AF3 891 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 ODF2Q5BJF6 829 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 PPP1R1BQ9UD71 204 aaPredicted RBP14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 BLOC1S2Q6QNY1 142 aa14.23□□□□□ -0.13
AMBRA1-201ENST00000314845 IGHMBP2P38935 993 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 DUSP27Q5VZP5 1158 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 IDI1Q13907 227 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 ABCC5O15440 1437 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 FIBPO43427 364 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 KDM4AO75164 1064 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 ATP2B2Q01814 1243 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 KRT32Q14532 448 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 FILIP1LQ4L180 1135 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 AMOTL2Q9Y2J4 779 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 LARP1Q6PKG0 1096 aaKnown RBP14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 MNS1Q8NEH6 495 aa14.22□□□□□ -0.13
AMBRA1-201ENST00000314845 TRAK2O60296 914 aa14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 ZNF652Q9Y2D9 606 aa14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 AKNAQ7Z591 1439 aa14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 CCDC69A6NI79 296 aa14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 HSP90AA2PQ14568 343 aaPredicted RBP14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 UNC13AQ9UPW8 1703 aa14.21□□□□□ -0.13
AMBRA1-201ENST00000314845 WDR33Q9C0J8 1336 aaKnown RBP14.21□□□□□ -0.14
AMBRA1-201ENST00000314845 WASLO00401 505 aaPredicted RBP14.21□□□□□ -0.14
AMBRA1-201ENST00000314845 TAF7Q15545 349 aaPredicted RBP14.21□□□□□ -0.14
AMBRA1-201ENST00000314845 TRIM5Q9C035 493 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 CUL7Q14999 1698 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 CDKL5O76039 1030 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 RNF214Q8ND24 703 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 IL1RAPL2Q9NP60 686 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 TMOD3Q9NYL9 352 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 SOGA3Q5TF21 947 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 PDILTQ8N807 584 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 PRPF40AO75400 957 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 KRT18P05783 430 aaKnown RBP14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 CCDC173Q0VFZ6 552 aa14.2□□□□□ -0.14
AMBRA1-201ENST00000314845 PTCD1O75127 700 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 KIF1BPQ96EK5 621 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 KIF14Q15058 1648 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 FOXO3O43524 673 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 TDO2P48775 406 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 FAM43AQ8N2R8 423 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 ZSCAN31Q96LW9 406 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 ARGLU1Q9NWB6 273 aaPredicted RBP14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 CCDC39Q9UFE4 941 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 PDIA4P13667 645 aaKnown RBP14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 CDR1P51861 262 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 NME9Q86XW9 330 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 UBAC1Q9BSL1 405 aa14.19□□□□□ -0.14
AMBRA1-201ENST00000314845 RAI14Q9P0K7 980 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms