RNA–Protein interactions for RNA: ENST00000313084.9

SEC16A-204, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SEC16A, Length 3,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-204ENST00000313084 ZFYVE9O95405 1425 aa12.57□□□□□ -0.4
SEC16A-204ENST00000313084 NINLQ9Y2I6 1382 aa12.57□□□□□ -0.4
SEC16A-204ENST00000313084 EIF4A2Q14240 407 aaKnown RBP12.57□□□□□ -0.4
SEC16A-204ENST00000313084 EID1Q9Y6B2 187 aa12.57□□□□□ -0.4
SEC16A-204ENST00000313084 USP19O94966 1318 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 DIP2BQ9P265 1576 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 KIF16BQ96L93 1317 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 AMPHP49418 695 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 VAMP4O75379 141 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 USHBP1Q8N6Y0 703 aa12.56□□□□□ -0.4
SEC16A-204ENST00000313084 NLRP1Q9C000 1473 aa12.55□□□□□ -0.4
SEC16A-204ENST00000313084 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-204ENST00000313084 IL27Q8NEV9 243 aa12.55□□□□□ -0.4
SEC16A-204ENST00000313084 LRRC7Q96NW7 1537 aa12.55□□□□□ -0.4
SEC16A-204ENST00000313084 NLRP6P59044 892 aa12.54□□□□□ -0.4
SEC16A-204ENST00000313084 GNAI1P63096 354 aa12.54□□□□□ -0.4
SEC16A-204ENST00000313084 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
SEC16A-204ENST00000313084 TTC21BQ7Z4L5 1316 aa12.54□□□□□ -0.4
SEC16A-204ENST00000313084 CPS1P31327 1500 aa12.53□□□□□ -0.4
SEC16A-204ENST00000313084 BECN1Q14457 450 aa12.53□□□□□ -0.4
SEC16A-204ENST00000313084 GZF1Q9H116 711 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-204ENST00000313084 COL3A1P02461 1466 aaPredicted RBP12.53□□□□□ -0.4
SEC16A-204ENST00000313084 F6X3S4 739 aa12.53□□□□□ -0.4
SEC16A-204ENST00000313084 C22orf23Q9BZE7 217 aa12.52□□□□□ -0.41
SEC16A-204ENST00000313084 TMEM2Q9UHN6 1383 aa12.51□□□□□ -0.41
SEC16A-204ENST00000313084 MRPL50Q8N5N7 158 aaKnown RBP12.51□□□□□ -0.41
SEC16A-204ENST00000313084 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
SEC16A-204ENST00000313084 EDC4Q6P2E9 1401 aaKnown RBP12.51□□□□□ -0.41
SEC16A-204ENST00000313084 SMARCA5O60264 1052 aaPredicted RBP12.51□□□□□ -0.41
SEC16A-204ENST00000313084 RTF1Q92541 710 aaKnown RBP12.51□□□□□ -0.41
SEC16A-204ENST00000313084 BRPF3Q9ULD4 1205 aa12.51□□□□□ -0.41
SEC16A-204ENST00000313084 PNPLA6Q8IY17 1366 aa12.5□□□□□ -0.41
SEC16A-204ENST00000313084 CHD1LQ86WJ1 897 aa12.5□□□□□ -0.41
SEC16A-204ENST00000313084 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
SEC16A-204ENST00000313084 CFAP44Q96MT7 982 aa12.5□□□□□ -0.41
SEC16A-204ENST00000313084 MAP3K19Q56UN5 1328 aa12.5□□□□□ -0.41
SEC16A-204ENST00000313084 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 KCNA6P17658 529 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 CALD1Q05682 793 aaKnown RBP12.49□□□□□ -0.41
SEC16A-204ENST00000313084 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 IFT57Q9NWB7 429 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
SEC16A-204ENST00000313084 HSP90AA1P07900 732 aaKnown RBP12.49□□□□□ -0.41
SEC16A-204ENST00000313084 CT47B1P0C2W7 299 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-204ENST00000313084 ZNF692Q9BU19 519 aaPredicted RBP12.49□□□□□ -0.41
SEC16A-204ENST00000313084 MAP2P11137 1827 aaKnown RBP12.49□□□□□ -0.41
SEC16A-204ENST00000313084 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-204ENST00000313084 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 PPP6R1Q9UPN7 881 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 IL16Q14005 1332 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 TSHZ3Q63HK5 1081 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 OTUD7AQ8TE49 926 aaPredicted RBP12.48□□□□□ -0.41
SEC16A-204ENST00000313084 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 GSE1Q14687 1217 aa12.48□□□□□ -0.41
SEC16A-204ENST00000313084 MTHFSDQ2M296 383 aaKnown RBP12.48□□□□□ -0.41
SEC16A-204ENST00000313084 ALDH1L2Q3SY69 923 aa12.47□□□□□ -0.41
SEC16A-204ENST00000313084 SIRT2Q8IXJ6 389 aa12.47□□□□□ -0.41
SEC16A-204ENST00000313084 HDAC1Q13547 482 aaPredicted RBP12.47□□□□□ -0.41
SEC16A-204ENST00000313084 G2E3Q7L622 706 aa12.47□□□□□ -0.41
SEC16A-204ENST00000313084 RBM42Q9BTD8 480 aaKnown RBP12.47□□□□□ -0.41
SEC16A-204ENST00000313084 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
SEC16A-204ENST00000313084 CPSF1Q10570 1443 aaKnown RBP12.46□□□□□ -0.41
SEC16A-204ENST00000313084 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
SEC16A-204ENST00000313084 MEIS3Q99687 375 aa12.46□□□□□ -0.41
SEC16A-204ENST00000313084 ATP7BP35670 1465 aa12.45□□□□□ -0.42
SEC16A-204ENST00000313084 EIF2S2P20042 333 aaKnown RBP12.45□□□□□ -0.42
SEC16A-204ENST00000313084 NUCB1Q02818 461 aa12.45□□□□□ -0.42
SEC16A-204ENST00000313084 ADGRB2O60241 1585 aa12.45□□□□□ -0.42
SEC16A-204ENST00000313084 EYA1Q99502 592 aa12.45□□□□□ -0.42
SEC16A-204ENST00000313084 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
SEC16A-204ENST00000313084 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
SEC16A-204ENST00000313084 FKBP5Q13451 457 aaPredicted RBP12.43□□□□□ -0.42
SEC16A-204ENST00000313084 HSCBQ8IWL3 235 aa12.43□□□□□ -0.42
SEC16A-204ENST00000313084 API5Q9BZZ5 524 aaKnown RBP12.43□□□□□ -0.42
SEC16A-204ENST00000313084 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
SEC16A-204ENST00000313084 ANXA1P04083 346 aa12.43□□□□□ -0.42
SEC16A-204ENST00000313084 HSP90AB1P08238 724 aaKnown RBP12.43□□□□□ -0.42
SEC16A-204ENST00000313084 AAMPQ13685 434 aa12.43□□□□□ -0.42
SEC16A-204ENST00000313084 ADAMTS13Q76LX8 1427 aa12.42□□□□□ -0.42
SEC16A-204ENST00000313084 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
SEC16A-204ENST00000313084 EXOC6BQ9Y2D4 811 aa12.42□□□□□ -0.42
SEC16A-204ENST00000313084 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
SEC16A-204ENST00000313084 SETD1BQ9UPS6 1966 aaKnown RBP12.42□□□□□ -0.42
SEC16A-204ENST00000313084 THEMISQ8N1K5 641 aaPredicted RBP12.41□□□□□ -0.42
SEC16A-204ENST00000313084 TBC1D9Q6ZT07 1266 aa12.41□□□□□ -0.42
SEC16A-204ENST00000313084 KIF20BQ96Q89 1820 aa12.41□□□□□ -0.42
SEC16A-204ENST00000313084 NOL8Q76FK4 1167 aaKnown RBP12.41□□□□□ -0.42
SEC16A-204ENST00000313084 MED14O60244 1454 aa12.4□□□□□ -0.42
SEC16A-204ENST00000313084 MSH6P52701 1360 aa12.4□□□□□ -0.42
SEC16A-204ENST00000313084 LRRC59Q96AG4 307 aaKnown RBP12.4□□□□□ -0.42
SEC16A-204ENST00000313084 USP6P35125 1406 aa12.4□□□□□ -0.42
SEC16A-204ENST00000313084 PSME1Q06323 249 aa12.4□□□□□ -0.42
SEC16A-204ENST00000313084 AGLP35573 1532 aa12.4□□□□□ -0.42
SEC16A-204ENST00000313084 CDK12Q9NYV4 1490 aaPredicted RBP12.39□□□□□ -0.43
SEC16A-204ENST00000313084 CD2BP2O95400 341 aaKnown RBP12.39□□□□□ -0.43
SEC16A-204ENST00000313084 STK31Q9BXU1 1019 aa12.39□□□□□ -0.43
SEC16A-204ENST00000313084 NRXN3Q9Y4C0 1643 aa12.39□□□□□ -0.43
SEC16A-204ENST00000313084 TPRNQ4KMQ1 711 aa12.39□□□□□ -0.43
SEC16A-204ENST00000313084 PLEKHG3A1L390 1219 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms