RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 NFE2L2Q16236 605 aa21.79■■□□□ 1.08
CLCF1-201ENST00000312438 IL16Q14005 1332 aa21.79■■□□□ 1.08
CLCF1-201ENST00000312438 KRT28Q7Z3Y7 464 aa21.78■■□□□ 1.08
CLCF1-201ENST00000312438 KCNH5Q8NCM2 988 aa21.78■■□□□ 1.08
CLCF1-201ENST00000312438 LRRC7Q96NW7 1537 aa21.78■■□□□ 1.08
CLCF1-201ENST00000312438 SULT6B1Q6IMI4 303 aa21.78■■□□□ 1.08
CLCF1-201ENST00000312438 MSH6P52701 1360 aa21.77■■□□□ 1.08
CLCF1-201ENST00000312438 MST1RQ04912 1400 aa21.77■■□□□ 1.07
CLCF1-201ENST00000312438 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.76■■□□□ 1.07
CLCF1-201ENST00000312438 HOXC9P31274 260 aa21.75■■□□□ 1.07
CLCF1-201ENST00000312438 XPCQ01831 940 aaPredicted RBP21.75■■□□□ 1.07
CLCF1-201ENST00000312438 USP54Q70EL1 1684 aa21.75■■□□□ 1.07
CLCF1-201ENST00000312438 STRCP1A6NGW2 1772 aa21.74■■□□□ 1.07
CLCF1-201ENST00000312438 PLIN1O60240 522 aa21.74■■□□□ 1.07
CLCF1-201ENST00000312438 STRCQ7RTU9 1775 aa21.73■■□□□ 1.07
CLCF1-201ENST00000312438 PEAK1Q9H792 1746 aa21.73■■□□□ 1.07
CLCF1-201ENST00000312438 CALD1Q05682 793 aaKnown RBP21.73■■□□□ 1.07
CLCF1-201ENST00000312438 LMOD3Q0VAK6 560 aa21.73■■□□□ 1.07
CLCF1-201ENST00000312438 ARHGEF10O15013 1369 aa21.72■■□□□ 1.07
CLCF1-201ENST00000312438 AEBP1Q8IUX7 1158 aa21.72■■□□□ 1.07
CLCF1-201ENST00000312438 RTL1A6NKG5 1358 aa21.71■■□□□ 1.07
CLCF1-201ENST00000312438 ZNF335Q9H4Z2 1342 aaPredicted RBP21.71■■□□□ 1.07
CLCF1-201ENST00000312438 CT47B1P0C2W7 299 aaPredicted RBP21.71■■□□□ 1.07
CLCF1-201ENST00000312438 IP6K1Q92551 441 aa21.71■■□□□ 1.07
CLCF1-201ENST00000312438 EYA1Q99502 592 aa21.71■■□□□ 1.07
CLCF1-201ENST00000312438 KIF1AQ12756 1690 aa21.7■■□□□ 1.06
CLCF1-201ENST00000312438 GCP02774 474 aa21.7■■□□□ 1.06
CLCF1-201ENST00000312438 LMOD2Q6P5Q4 547 aa21.7■■□□□ 1.06
CLCF1-201ENST00000312438 B4GALNT3Q6L9W6 998 aa21.69■■□□□ 1.06
CLCF1-201ENST00000312438 EXOC6Q8TAG9 804 aa21.69■■□□□ 1.06
CLCF1-201ENST00000312438 IGSF1Q8N6C5 1336 aa21.69■■□□□ 1.06
CLCF1-201ENST00000312438 FANCIQ9NVI1 1328 aa21.69■■□□□ 1.06
CLCF1-201ENST00000312438 BCAR3O75815 825 aa21.69■■□□□ 1.06
CLCF1-201ENST00000312438 NPHP3Q7Z494 1330 aa21.68■■□□□ 1.06
CLCF1-201ENST00000312438 RARSP54136 660 aaKnown RBP21.67■■□□□ 1.06
CLCF1-201ENST00000312438 MARF1Q9Y4F3 1742 aaKnown RBP21.67■■□□□ 1.06
CLCF1-201ENST00000312438 TSR2Q969E8 191 aaKnown RBP21.66■■□□□ 1.06
CLCF1-201ENST00000312438 KDRP35968 1356 aa21.66■■□□□ 1.06
CLCF1-201ENST00000312438 USP19O94966 1318 aa21.66■■□□□ 1.06
CLCF1-201ENST00000312438 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
CLCF1-201ENST00000312438 NFAT5O94916 1531 aa21.65■■□□□ 1.06
CLCF1-201ENST00000312438 EXOSC9Q06265 439 aaKnown RBP21.64■■□□□ 1.06
CLCF1-201ENST00000312438 ARHGEF25Q86VW2 580 aa21.64■■□□□ 1.06
CLCF1-201ENST00000312438 GNAI1P63096 354 aa21.64■■□□□ 1.05
CLCF1-201ENST00000312438 IFT57Q9NWB7 429 aa21.64■■□□□ 1.05
CLCF1-201ENST00000312438 RGPD1P0DJD0 1748 aa21.64■■□□□ 1.05
CLCF1-201ENST00000312438 C20orf194Q5TEA3 1177 aa21.63■■□□□ 1.05
CLCF1-201ENST00000312438 LTV1Q96GA3 475 aaPredicted RBP21.63■■□□□ 1.05
CLCF1-201ENST00000312438 CRBNQ96SW2 442 aa21.63■■□□□ 1.05
CLCF1-201ENST00000312438 SLAIN2Q9P270 581 aa21.63■■□□□ 1.05
CLCF1-201ENST00000312438 DDX17Q92841 729 aaKnown RBP21.62■■□□□ 1.05
CLCF1-201ENST00000312438 SLIT3O75094 1523 aa21.62■■□□□ 1.05
CLCF1-201ENST00000312438 ZNF853P0CG23 659 aa21.62■■□□□ 1.05
CLCF1-201ENST00000312438 THUMPD2Q9BTF0 503 aaKnown RBP21.62■■□□□ 1.05
CLCF1-201ENST00000312438 BRINP3Q76B58 766 aa21.61■■□□□ 1.05
CLCF1-201ENST00000312438 CFAP44Q96MT7 982 aa21.61■■□□□ 1.05
CLCF1-201ENST00000312438 LAS1LQ9Y4W2 734 aaKnown RBP21.61■■□□□ 1.05
CLCF1-201ENST00000312438 TRPM3Q9HCF6 1732 aaPredicted RBP21.61■■□□□ 1.05
CLCF1-201ENST00000312438 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
CLCF1-201ENST00000312438 ZBTB7CA1YPR0 619 aa21.59■■□□□ 1.05
CLCF1-201ENST00000312438 FAM83GA6ND36 823 aa21.59■■□□□ 1.05
CLCF1-201ENST00000312438 GAS2L2Q8NHY3 880 aa21.59■■□□□ 1.05
CLCF1-201ENST00000312438 MTHFSDQ2M296 383 aaKnown RBP21.59■■□□□ 1.05
CLCF1-201ENST00000312438 CANXP27824 592 aaKnown RBP21.58■■□□□ 1.05
CLCF1-201ENST00000312438 PLEKHG5O94827 1062 aa21.57■■□□□ 1.04
CLCF1-201ENST00000312438 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
CLCF1-201ENST00000312438 ZNF428Q96B54 188 aa21.57■■□□□ 1.04
CLCF1-201ENST00000312438 SPATA31A3Q5VYP0 1347 aa21.57■■□□□ 1.04
CLCF1-201ENST00000312438 NBPF6Q5VWK0 638 aa21.56■■□□□ 1.04
CLCF1-201ENST00000312438 FRAT1Q92837 279 aaPredicted RBP21.56■■□□□ 1.04
CLCF1-201ENST00000312438 NBPF4Q96M43 638 aa21.56■■□□□ 1.04
CLCF1-201ENST00000312438 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
CLCF1-201ENST00000312438 RTF1Q92541 710 aaKnown RBP21.55■■□□□ 1.04
CLCF1-201ENST00000312438 MBIPQ9NS73 344 aa21.55■■□□□ 1.04
CLCF1-201ENST00000312438 TNS3Q68CZ2 1445 aa21.55■■□□□ 1.04
CLCF1-201ENST00000312438 XIRP1Q702N8 1843 aaKnown RBP21.54■■□□□ 1.04
CLCF1-201ENST00000312438 PXDNQ92626 1479 aa21.54■■□□□ 1.04
CLCF1-201ENST00000312438 ZC3H6P61129 1189 aaKnown RBP21.53■■□□□ 1.04
CLCF1-201ENST00000312438 MCM10Q7L590 875 aa21.53■■□□□ 1.04
CLCF1-201ENST00000312438 BCL2L13Q9BXK5 485 aa21.53■■□□□ 1.04
CLCF1-201ENST00000312438 PHRF1Q9P1Y6 1649 aaKnown RBP21.53■■□□□ 1.04
CLCF1-201ENST00000312438 ALDH1L2Q3SY69 923 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 ALS2Q96Q42 1657 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 CHL1O00533 1208 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 ANKRD24Q8TF21 1146 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 SSH1Q8WYL5 1049 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 SMC4Q9NTJ3 1288 aa21.52■■□□□ 1.04
CLCF1-201ENST00000312438 SOS2Q07890 1332 aaPredicted RBP21.51■■□□□ 1.03
CLCF1-201ENST00000312438 VAMP4O75379 141 aa21.51■■□□□ 1.03
CLCF1-201ENST00000312438 USHBP1Q8N6Y0 703 aa21.51■■□□□ 1.03
CLCF1-201ENST00000312438 AXIN2Q9Y2T1 843 aa21.51■■□□□ 1.03
CLCF1-201ENST00000312438 LTN1O94822 1766 aa21.51■■□□□ 1.03
CLCF1-201ENST00000312438 GNAT3A8MTJ3 354 aa21.5■■□□□ 1.03
CLCF1-201ENST00000312438 MS4A1P11836 297 aa21.5■■□□□ 1.03
CLCF1-201ENST00000312438 ZKSCAN2Q63HK3 967 aa21.5■■□□□ 1.03
CLCF1-201ENST00000312438 MED1Q15648 1581 aaPredicted RBP21.49■■□□□ 1.03
CLCF1-201ENST00000312438 LRRC59Q96AG4 307 aaKnown RBP21.49■■□□□ 1.03
CLCF1-201ENST00000312438 CABLES1Q8TDN4 633 aa21.48■■□□□ 1.03
CLCF1-201ENST00000312438 BRPF1P55201 1214 aaPredicted RBP21.48■■□□□ 1.03
CLCF1-201ENST00000312438 PANK1Q8TE04 598 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms