RNA–Protein interactions for RNA: ENST00000310653.10

RAB6A-201, Transcript of RAB6A, member RAS oncogene family, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene RAB6A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-201ENST00000310653 NSD2O96028 1365 aa16.61■□□□□ 0.25
RAB6A-201ENST00000310653 AMPHP49418 695 aa16.61■□□□□ 0.25
RAB6A-201ENST00000310653 FOXD4L1Q9NU39 408 aa16.61■□□□□ 0.25
RAB6A-201ENST00000310653 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
RAB6A-201ENST00000310653 F6X3S4 739 aa16.6■□□□□ 0.25
RAB6A-201ENST00000310653 SETD1BQ9UPS6 1966 aaKnown RBP16.6■□□□□ 0.25
RAB6A-201ENST00000310653 USP19O94966 1318 aa16.59■□□□□ 0.25
RAB6A-201ENST00000310653 PUS7Q96PZ0 661 aaKnown RBP16.58■□□□□ 0.25
RAB6A-201ENST00000310653 HDGFP51858 240 aaKnown RBP16.58■□□□□ 0.24
RAB6A-201ENST00000310653 NFKBIBQ15653 356 aa16.58■□□□□ 0.24
RAB6A-201ENST00000310653 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
RAB6A-201ENST00000310653 LRRC7Q96NW7 1537 aa16.58■□□□□ 0.24
RAB6A-201ENST00000310653 MAP2P11137 1827 aaKnown RBP16.57■□□□□ 0.24
RAB6A-201ENST00000310653 C16orf71Q8IYS4 520 aaPredicted RBP16.57■□□□□ 0.24
RAB6A-201ENST00000310653 MAP3K19Q56UN5 1328 aa16.57■□□□□ 0.24
RAB6A-201ENST00000310653 NGEFQ8N5V2 710 aa16.57■□□□□ 0.24
RAB6A-201ENST00000310653 ABTB2Q8N961 1025 aa16.57■□□□□ 0.24
RAB6A-201ENST00000310653 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
RAB6A-201ENST00000310653 SMARCA5O60264 1052 aaPredicted RBP16.55■□□□□ 0.24
RAB6A-201ENST00000310653 ZBTB40Q9NUA8 1239 aa16.55■□□□□ 0.24
RAB6A-201ENST00000310653 MTHFSDQ2M296 383 aaKnown RBP16.54■□□□□ 0.24
RAB6A-201ENST00000310653 G2E3Q7L622 706 aa16.54■□□□□ 0.24
RAB6A-201ENST00000310653 PTPRUQ92729 1446 aa16.54■□□□□ 0.24
RAB6A-201ENST00000310653 TSHZ3Q63HK5 1081 aa16.54■□□□□ 0.24
RAB6A-201ENST00000310653 MRPL50Q8N5N7 158 aaKnown RBP16.54■□□□□ 0.24
RAB6A-201ENST00000310653 OTUD7AQ8TE49 926 aaPredicted RBP16.54■□□□□ 0.24
RAB6A-201ENST00000310653 DDX17Q92841 729 aaKnown RBP16.54■□□□□ 0.24
RAB6A-201ENST00000310653 PNPLA6Q8IY17 1366 aa16.53■□□□□ 0.24
RAB6A-201ENST00000310653 DDRGK1Q96HY6 314 aa16.53■□□□□ 0.24
RAB6A-201ENST00000310653 SIRT2Q8IXJ6 389 aa16.53■□□□□ 0.24
RAB6A-201ENST00000310653 IPO8O15397 1037 aaKnown RBP16.52■□□□□ 0.24
RAB6A-201ENST00000310653 SLC4A2P04920 1241 aa16.52■□□□□ 0.24
RAB6A-201ENST00000310653 GNAI1P63096 354 aa16.52■□□□□ 0.24
RAB6A-201ENST00000310653 NINLQ9Y2I6 1382 aa16.52■□□□□ 0.24
RAB6A-201ENST00000310653 ESCO1Q5FWF5 840 aa16.52■□□□□ 0.23
RAB6A-201ENST00000310653 EYA1Q99502 592 aa16.52■□□□□ 0.23
RAB6A-201ENST00000310653 ANXA1P04083 346 aa16.51■□□□□ 0.23
RAB6A-201ENST00000310653 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
RAB6A-201ENST00000310653 EDC4Q6P2E9 1401 aaKnown RBP16.51■□□□□ 0.23
RAB6A-201ENST00000310653 ADAMTS13Q76LX8 1427 aa16.51■□□□□ 0.23
RAB6A-201ENST00000310653 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
RAB6A-201ENST00000310653 CFAP44Q96MT7 982 aa16.5■□□□□ 0.23
RAB6A-201ENST00000310653 ZBTB7BO15156 539 aaPredicted RBP16.5■□□□□ 0.23
RAB6A-201ENST00000310653 LRRC59Q96AG4 307 aaKnown RBP16.5■□□□□ 0.23
RAB6A-201ENST00000310653 ZNF692Q9BU19 519 aaPredicted RBP16.5■□□□□ 0.23
RAB6A-201ENST00000310653 TSPYL4Q9UJ04 414 aa16.5■□□□□ 0.23
RAB6A-201ENST00000310653 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
RAB6A-201ENST00000310653 FAM135BQ49AJ0 1406 aa16.5■□□□□ 0.23
RAB6A-201ENST00000310653 RBM42Q9BTD8 480 aaKnown RBP16.49■□□□□ 0.23
RAB6A-201ENST00000310653 KIF16BQ96L93 1317 aa16.49■□□□□ 0.23
RAB6A-201ENST00000310653 EIF2S2P20042 333 aaKnown RBP16.49■□□□□ 0.23
RAB6A-201ENST00000310653 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
RAB6A-201ENST00000310653 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
RAB6A-201ENST00000310653 MEIS3Q99687 375 aa16.48■□□□□ 0.23
RAB6A-201ENST00000310653 GZF1Q9H116 711 aaPredicted RBP16.48■□□□□ 0.23
RAB6A-201ENST00000310653 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
RAB6A-201ENST00000310653 ORAI2Q96SN7 254 aa16.47■□□□□ 0.23
RAB6A-201ENST00000310653 SPATA31D1Q6ZQQ2 1576 aa16.47■□□□□ 0.23
RAB6A-201ENST00000310653 ATP7BP35670 1465 aa16.47■□□□□ 0.23
RAB6A-201ENST00000310653 GOLGB1Q14789 3259 aaKnown RBP16.47■□□□□ 0.23
RAB6A-201ENST00000310653 NRXN3Q9Y4C0 1643 aa16.47■□□□□ 0.23
RAB6A-201ENST00000310653 IFT57Q9NWB7 429 aa16.47■□□□□ 0.23
RAB6A-201ENST00000310653 KIF13AQ9H1H9 1805 aa16.46■□□□□ 0.23
RAB6A-201ENST00000310653 CHD1LQ86WJ1 897 aa16.46■□□□□ 0.23
RAB6A-201ENST00000310653 THEMISQ8N1K5 641 aaPredicted RBP16.46■□□□□ 0.23
RAB6A-201ENST00000310653 TBC1D2Q9BYX2 928 aa16.46■□□□□ 0.23
RAB6A-201ENST00000310653 C22orf23Q9BZE7 217 aa16.45■□□□□ 0.22
RAB6A-201ENST00000310653 PSME1Q06323 249 aa16.44■□□□□ 0.22
RAB6A-201ENST00000310653 ZNF853P0CG23 659 aa16.43■□□□□ 0.22
RAB6A-201ENST00000310653 MED14O60244 1454 aa16.43■□□□□ 0.22
RAB6A-201ENST00000310653 DLC1Q96QB1 1528 aa16.43■□□□□ 0.22
RAB6A-201ENST00000310653 IL16Q14005 1332 aa16.42■□□□□ 0.22
RAB6A-201ENST00000310653 KCNQ3O43525 872 aa16.42■□□□□ 0.22
RAB6A-201ENST00000310653 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
RAB6A-201ENST00000310653 BRPF3Q9ULD4 1205 aa16.42■□□□□ 0.22
RAB6A-201ENST00000310653 AGLP35573 1532 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 DTNBO60941 627 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
RAB6A-201ENST00000310653 LGR6Q9HBX8 967 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
RAB6A-201ENST00000310653 ALDH1L2Q3SY69 923 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 SMC5Q8IY18 1101 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 TBC1D32Q96NH3 1257 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 USP6P35125 1406 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 USP32Q8NFA0 1604 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 PLEKHG3A1L390 1219 aa16.41■□□□□ 0.22
RAB6A-201ENST00000310653 FKBP5Q13451 457 aaPredicted RBP16.41■□□□□ 0.22
RAB6A-201ENST00000310653 HDAC1Q13547 482 aaPredicted RBP16.41■□□□□ 0.22
RAB6A-201ENST00000310653 NUCB1Q02818 461 aa16.4■□□□□ 0.22
RAB6A-201ENST00000310653 MPRIPQ6WCQ1 1025 aa16.4■□□□□ 0.22
RAB6A-201ENST00000310653 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
RAB6A-201ENST00000310653 RIMS1Q86UR5 1692 aaKnown RBP16.4■□□□□ 0.22
RAB6A-201ENST00000310653 CD2BP2O95400 341 aaKnown RBP16.4■□□□□ 0.22
RAB6A-201ENST00000310653 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
RAB6A-201ENST00000310653 KIF20BQ96Q89 1820 aa16.38■□□□□ 0.21
RAB6A-201ENST00000310653 PIP4K2AP48426 406 aaPredicted RBP16.38■□□□□ 0.21
RAB6A-201ENST00000310653 CHL1O00533 1208 aa16.38■□□□□ 0.21
RAB6A-201ENST00000310653 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
RAB6A-201ENST00000310653 HOXC9P31274 260 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms