RNA–Protein interactions for RNA: ENST00000310325.9

CTSF-201, Transcript of cathepsin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSF, Length 2,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-201ENST00000310325 CALD1Q05682 793 aaKnown RBP29.42■■■□□ 2.3
CTSF-201ENST00000310325 ADAMTSL3P82987 1691 aa29.41■■■□□ 2.3
CTSF-201ENST00000310325 ANKARQ7Z5J8 1434 aa29.41■■■□□ 2.3
CTSF-201ENST00000310325 IGHDP01880 384 aa29.41■■■□□ 2.3
CTSF-201ENST00000310325 PMFBP1Q8TBY8 1022 aa29.41■■■□□ 2.3
CTSF-201ENST00000310325 KCNA6P17658 529 aa29.4■■■□□ 2.3
CTSF-201ENST00000310325 SSH1Q8WYL5 1049 aa29.4■■■□□ 2.3
CTSF-201ENST00000310325 ERICH6Q7L0X2 663 aa29.39■■■□□ 2.3
CTSF-201ENST00000310325 CHD2O14647 1828 aaKnown RBP29.38■■■□□ 2.29
CTSF-201ENST00000310325 EIF4A2Q14240 407 aaKnown RBP29.38■■■□□ 2.29
CTSF-201ENST00000310325 DZIP1LQ8IYY4 767 aaKnown RBP29.38■■■□□ 2.29
CTSF-201ENST00000310325 LMOD3Q0VAK6 560 aa29.37■■■□□ 2.29
CTSF-201ENST00000310325 MVPQ14764 893 aaKnown RBP29.37■■■□□ 2.29
CTSF-201ENST00000310325 NGDNQ8NEJ9 315 aaKnown RBP29.37■■■□□ 2.29
CTSF-201ENST00000310325 FTSJ3Q8IY81 847 aaKnown RBP29.37■■■□□ 2.29
CTSF-201ENST00000310325 RGPD1P0DJD0 1748 aa29.37■■■□□ 2.29
CTSF-201ENST00000310325 PIK3C2AO00443 1686 aa29.36■■■□□ 2.29
CTSF-201ENST00000310325 IPO9Q96P70 1041 aaKnown RBP29.35■■■□□ 2.29
CTSF-201ENST00000310325 GNAI1P63096 354 aa29.34■■■□□ 2.29
CTSF-201ENST00000310325 ALDH1L2Q3SY69 923 aa29.34■■■□□ 2.29
CTSF-201ENST00000310325 ANKLE2Q86XL3 938 aa29.34■■■□□ 2.29
CTSF-201ENST00000310325 IFT57Q9NWB7 429 aa29.34■■■□□ 2.29
CTSF-201ENST00000310325 LAS1LQ9Y4W2 734 aaKnown RBP29.34■■■□□ 2.29
CTSF-201ENST00000310325 KIF16BQ96L93 1317 aa29.33■■■□□ 2.29
CTSF-201ENST00000310325 TRIM27P14373 513 aa29.33■■■□□ 2.29
CTSF-201ENST00000310325 MYT1Q01538 1121 aa29.33■■■□□ 2.29
CTSF-201ENST00000310325 ZNF428Q96B54 188 aa29.33■■■□□ 2.29
CTSF-201ENST00000310325 THUMPD2Q9BTF0 503 aaKnown RBP29.33■■■□□ 2.29
CTSF-201ENST00000310325 ATF7IPQ6VMQ6 1270 aa29.32■■■□□ 2.28
CTSF-201ENST00000310325 RGS3P49796 1198 aa29.32■■■□□ 2.28
CTSF-201ENST00000310325 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
CTSF-201ENST00000310325 PCDHB15Q9Y5E8 787 aa29.31■■■□□ 2.28
CTSF-201ENST00000310325 ZNF853P0CG23 659 aa29.3■■■□□ 2.28
CTSF-201ENST00000310325 NOB1Q9ULX3 412 aaKnown RBP29.3■■■□□ 2.28
CTSF-201ENST00000310325 NOP58Q9Y2X3 529 aaKnown RBP29.3■■■□□ 2.28
CTSF-201ENST00000310325 HSP90AB2PQ58FF8 381 aa29.29■■■□□ 2.28
CTSF-201ENST00000310325 SULT6B1Q6IMI4 303 aa29.29■■■□□ 2.28
CTSF-201ENST00000310325 AEBP1Q8IUX7 1158 aa29.28■■■□□ 2.28
CTSF-201ENST00000310325 USP54Q70EL1 1684 aa29.28■■■□□ 2.28
CTSF-201ENST00000310325 FAM161AQ3B820 660 aa29.28■■■□□ 2.28
CTSF-201ENST00000310325 NPM2Q86SE8 214 aaKnown RBP29.28■■■□□ 2.28
CTSF-201ENST00000310325 MAP3K19Q56UN5 1328 aa29.28■■■□□ 2.28
CTSF-201ENST00000310325 SBNO1A3KN83 1393 aa29.27■■■□□ 2.28
CTSF-201ENST00000310325 IPO8O15397 1037 aaKnown RBP29.27■■■□□ 2.28
CTSF-201ENST00000310325 SOX12O15370 315 aa29.27■■■□□ 2.28
CTSF-201ENST00000310325 FLT4P35916 1363 aa29.26■■■□□ 2.27
CTSF-201ENST00000310325 BRPF1P55201 1214 aaPredicted RBP29.26■■■□□ 2.27
CTSF-201ENST00000310325 CFAP44Q96MT7 982 aa29.26■■■□□ 2.27
CTSF-201ENST00000310325 MBIPQ9NS73 344 aa29.26■■■□□ 2.27
CTSF-201ENST00000310325 MARF1Q9Y4F3 1742 aaKnown RBP29.25■■■□□ 2.27
CTSF-201ENST00000310325 DDX19BQ9UMR2 479 aa29.25■■■□□ 2.27
CTSF-201ENST00000310325 ARHGEF10O15013 1369 aa29.24■■■□□ 2.27
CTSF-201ENST00000310325 RWDD1Q9H446 243 aaPredicted RBP29.24■■■□□ 2.27
CTSF-201ENST00000310325 VIRMAQ69YN4 1812 aaKnown RBP29.24■■■□□ 2.27
CTSF-201ENST00000310325 C8orf34Q49A92 452 aa29.23■■■□□ 2.27
CTSF-201ENST00000310325 FAM83GA6ND36 823 aa29.23■■■□□ 2.27
CTSF-201ENST00000310325 VAMP4O75379 141 aa29.23■■■□□ 2.27
CTSF-201ENST00000310325 ITPRIPQ8IWB1 547 aa29.23■■■□□ 2.27
CTSF-201ENST00000310325 NLRP6P59044 892 aa29.19■■■□□ 2.26
CTSF-201ENST00000310325 TMEM57Q8N5G2 664 aa29.19■■■□□ 2.26
CTSF-201ENST00000310325 TSPYL6Q8N831 410 aa29.19■■■□□ 2.26
CTSF-201ENST00000310325 ZBTB47Q9UFB7 747 aaPredicted RBP29.19■■■□□ 2.26
CTSF-201ENST00000310325 DCTN1Q14203 1278 aa29.18■■■□□ 2.26
CTSF-201ENST00000310325 PAK3O75914 559 aaPredicted RBP29.18■■■□□ 2.26
CTSF-201ENST00000310325 AMPHP49418 695 aa29.17■■■□□ 2.26
CTSF-201ENST00000310325 MRPL50Q8N5N7 158 aaKnown RBP29.17■■■□□ 2.26
CTSF-201ENST00000310325 ADGRL3Q9HAR2 1447 aa29.16■■■□□ 2.26
CTSF-201ENST00000310325 TWISTNBQ3B726 338 aaPredicted RBP29.16■■■□□ 2.26
CTSF-201ENST00000310325 NPHP4O75161 1426 aaPredicted RBP29.16■■■□□ 2.26
CTSF-201ENST00000310325 KIF24Q5T7B8 1368 aa29.16■■■□□ 2.26
CTSF-201ENST00000310325 KDRP35968 1356 aa29.15■■■□□ 2.26
CTSF-201ENST00000310325 ARHGAP45Q92619 1136 aa29.15■■■□□ 2.26
CTSF-201ENST00000310325 PHF8Q9UPP1 1060 aa29.14■■■□□ 2.26
CTSF-201ENST00000310325 C8orf58Q8NAV2 365 aa29.13■■■□□ 2.25
CTSF-201ENST00000310325 PDZRN3Q9UPQ7 1066 aa29.13■■■□□ 2.25
CTSF-201ENST00000310325 IGSF1Q8N6C5 1336 aa29.12■■■□□ 2.25
CTSF-201ENST00000310325 ELL2O00472 640 aaPredicted RBP29.12■■■□□ 2.25
CTSF-201ENST00000310325 ZBTB40Q9NUA8 1239 aa29.12■■■□□ 2.25
CTSF-201ENST00000310325 HDAC1Q13547 482 aaPredicted RBP29.11■■■□□ 2.25
CTSF-201ENST00000310325 ABTB2Q8N961 1025 aa29.11■■■□□ 2.25
CTSF-201ENST00000310325 NUTM2GQ5VZR2 741 aa29.1■■■□□ 2.25
CTSF-201ENST00000310325 MCM10Q7L590 875 aa29.09■■■□□ 2.25
CTSF-201ENST00000310325 EYA1Q99502 592 aa29.09■■■□□ 2.25
CTSF-201ENST00000310325 CHL1O00533 1208 aa29.08■■■□□ 2.25
CTSF-201ENST00000310325 HOXC9P31274 260 aa29.08■■■□□ 2.25
CTSF-201ENST00000310325 RBM33Q96EV2 1170 aaKnown RBP29.08■■■□□ 2.25
CTSF-201ENST00000310325 DDRGK1Q96HY6 314 aa29.07■■■□□ 2.24
CTSF-201ENST00000310325 NWD1Q149M9 1564 aa29.06■■■□□ 2.24
CTSF-201ENST00000310325 LTN1O94822 1766 aa29.06■■■□□ 2.24
CTSF-201ENST00000310325 CRB1P82279 1406 aa29.06■■■□□ 2.24
CTSF-201ENST00000310325 KIAA0232Q92628 1395 aa29.05■■■□□ 2.24
CTSF-201ENST00000310325 ABCC4O15439 1325 aa29.05■■■□□ 2.24
CTSF-201ENST00000310325 HAP1P54257 671 aaPredicted RBP29.04■■■□□ 2.24
CTSF-201ENST00000310325 MTHFSDQ2M296 383 aaKnown RBP29.04■■■□□ 2.24
CTSF-201ENST00000310325 RTL1A6NKG5 1358 aa29.04■■■□□ 2.24
CTSF-201ENST00000310325 CHMP4BQ9H444 224 aaKnown RBP29.04■■■□□ 2.24
CTSF-201ENST00000310325 C14orf37Q86TY3 774 aa29.03■■■□□ 2.24
CTSF-201ENST00000310325 GAS2L2Q8NHY3 880 aa29.02■■■□□ 2.24
CTSF-201ENST00000310325 API5Q9BZZ5 524 aaKnown RBP29.01■■■□□ 2.24
CTSF-201ENST00000310325 FOXO3O43524 673 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms