RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 NFE2L2Q16236 605 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 ZKSCAN2Q63HK3 967 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 FLT4P35916 1363 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 BABAM1Q9NWV8 329 aa7.57□□□□□ -1.2
SEC22A-201ENST00000309934 SETD1BQ9UPS6 1966 aaKnown RBP7.56□□□□□ -1.2
SEC22A-201ENST00000309934 TCERG1O14776 1098 aaKnown RBP7.56□□□□□ -1.2
SEC22A-201ENST00000309934 METP08581 1390 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 CCDC146Q8IYE0 955 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 ARHGEF10O15013 1369 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 KNDC1Q76NI1 1749 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 LTKP29376 864 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 DDRGK1Q96HY6 314 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 SMC4Q9NTJ3 1288 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 IFT57Q9NWB7 429 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 DDX19BQ9UMR2 479 aa7.56□□□□□ -1.2
SEC22A-201ENST00000309934 HMMRO75330 724 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 ALDH1L2Q3SY69 923 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 CENPQQ7L2Z9 268 aaPredicted RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 RAPGEF4Q8WZA2 1011 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 TRIM44Q96DX7 344 aaPredicted RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 NAP1L2Q9ULW6 460 aaPredicted RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 NOP58Q9Y2X3 529 aaKnown RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 LAS1LQ9Y4W2 734 aaKnown RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 RIMS1Q86UR5 1692 aaKnown RBP7.55□□□□□ -1.2
SEC22A-201ENST00000309934 SBNO1A3KN83 1393 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 SLFN5Q08AF3 891 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 ADGRL3Q9HAR2 1447 aa7.55□□□□□ -1.2
SEC22A-201ENST00000309934 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 CARD14Q9BXL6 1004 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 PRKAR2BP31323 418 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 CDK12Q9NYV4 1490 aaPredicted RBP7.54□□□□□ -1.2
SEC22A-201ENST00000309934 SPG7Q9UQ90 795 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 ARHGEF28Q8N1W1 1705 aaKnown RBP7.54□□□□□ -1.2
SEC22A-201ENST00000309934 CDC42BPGQ6DT37 1551 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 DCCP43146 1447 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 TEFQ10587 303 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 ADAMTS13Q76LX8 1427 aa7.54□□□□□ -1.2
SEC22A-201ENST00000309934 TMPOP42166 694 aaKnown RBP7.54□□□□□ -1.2
SEC22A-201ENST00000309934 UBR1Q8IWV7 1749 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 HSP90B1P14625 803 aaKnown RBP7.53□□□□□ -1.2
SEC22A-201ENST00000309934 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
SEC22A-201ENST00000309934 FRAT1Q92837 279 aaPredicted RBP7.53□□□□□ -1.2
SEC22A-201ENST00000309934 USP6P35125 1406 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 USP31Q70CQ4 1352 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 ADGRB2O60241 1585 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 NUTM2FA1L443 756 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 WWC1Q8IX03 1113 aa7.53□□□□□ -1.2
SEC22A-201ENST00000309934 ROBO2Q9HCK4 1378 aa7.52□□□□□ -1.2
SEC22A-201ENST00000309934 ITSN1Q15811 1721 aa7.52□□□□□ -1.21
SEC22A-201ENST00000309934 KRT28Q7Z3Y7 464 aa7.52□□□□□ -1.21
SEC22A-201ENST00000309934 NME9Q86XW9 330 aa7.52□□□□□ -1.21
SEC22A-201ENST00000309934 ZNF526Q8TF50 670 aaPredicted RBP7.52□□□□□ -1.21
SEC22A-201ENST00000309934 CCDC9Q9Y3X0 531 aaKnown RBP7.52□□□□□ -1.21
SEC22A-201ENST00000309934 C3P01024 1663 aa7.52□□□□□ -1.21
SEC22A-201ENST00000309934 DDX58O95786 925 aaKnown RBP7.51□□□□□ -1.21
SEC22A-201ENST00000309934 EVA1CP58658 441 aa7.51□□□□□ -1.21
SEC22A-201ENST00000309934 DNTTIP2Q5QJE6 756 aaKnown RBP7.51□□□□□ -1.21
SEC22A-201ENST00000309934 CPSF1Q10570 1443 aaKnown RBP7.51□□□□□ -1.21
SEC22A-201ENST00000309934 SOX12O15370 315 aa7.51□□□□□ -1.21
SEC22A-201ENST00000309934 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
SEC22A-201ENST00000309934 SIGLEC1Q9BZZ2 1709 aa7.51□□□□□ -1.21
SEC22A-201ENST00000309934 CCDC30Q5VVM6 783 aa7.51□□□□□ -1.21
SEC22A-201ENST00000309934 POLKQ9UBT6 870 aa7.51□□□□□ -1.21
SEC22A-201ENST00000309934 PLEKHG2Q9H7P9 1386 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 NCKAP5LQ9HCH0 1330 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 GNAT3A8MTJ3 354 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 SULT6B1Q6IMI4 303 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 FBXO41Q8TF61 875 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 SETD1AO15047 1707 aaKnown RBP7.5□□□□□ -1.21
SEC22A-201ENST00000309934 ARHGAP45Q92619 1136 aa7.5□□□□□ -1.21
SEC22A-201ENST00000309934 PLEKHH1Q9ULM0 1364 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 BECN1Q14457 450 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 TTC5Q8N0Z6 440 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 IP6K1Q92551 441 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 PTPRUQ92729 1446 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 TSPYL4Q9UJ04 414 aa7.49□□□□□ -1.21
SEC22A-201ENST00000309934 ZNF142P52746 1687 aaPredicted RBP7.49□□□□□ -1.21
SEC22A-201ENST00000309934 CCDC184Q52MB2 194 aa7.48□□□□□ -1.21
SEC22A-201ENST00000309934 ITPRIPQ8IWB1 547 aa7.48□□□□□ -1.21
SEC22A-201ENST00000309934 HSP90AB4PQ58FF6 505 aa7.48□□□□□ -1.21
SEC22A-201ENST00000309934 ANP32BQ92688 251 aaKnown RBP7.48□□□□□ -1.21
SEC22A-201ENST00000309934 RRP7AQ9Y3A4 280 aaKnown RBP7.48□□□□□ -1.21
SEC22A-201ENST00000309934 TOM1O60784 492 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
SEC22A-201ENST00000309934 CDCA7Q9BWT1 371 aaPredicted RBP7.47□□□□□ -1.21
SEC22A-201ENST00000309934 PTPRCP08575 1304 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 ADAMTSL3P82987 1691 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 HMOX1P09601 288 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 LTV1Q96GA3 475 aaPredicted RBP7.47□□□□□ -1.21
SEC22A-201ENST00000309934 PNPLA6Q8IY17 1366 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 DUSP27Q5VZP5 1158 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 NLRP2Q9NX02 1062 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 GNAI3P08754 354 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 IL13P35225 146 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 NEXNQ0ZGT2 675 aa7.47□□□□□ -1.21
SEC22A-201ENST00000309934 TWISTNBQ3B726 338 aaPredicted RBP7.47□□□□□ -1.21
SEC22A-201ENST00000309934 HMGB1P09429 215 aaKnown RBP7.46□□□□□ -1.21
SEC22A-201ENST00000309934 HOXB7P09629 217 aa7.46□□□□□ -1.21
SEC22A-201ENST00000309934 PRDM11Q9NQV5 511 aa7.46□□□□□ -1.21
SEC22A-201ENST00000309934 EMILIN1Q9Y6C2 1016 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms