RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 TBC1D32Q96NH3 1257 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 ADGRF5Q8IZF2 1346 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 WASHC4Q2M389 1173 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 URB2Q14146 1524 aaKnown RBP21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 MARCH6O60337 910 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 KRT85P78386 507 aa21.46■■□□□ 1.03
ATP2A3-201ENST00000309890 CCDC70Q6NSX1 233 aa21.45■■□□□ 1.03
ATP2A3-201ENST00000309890 THUMPD2Q9BTF0 503 aaKnown RBP21.45■■□□□ 1.03
ATP2A3-201ENST00000309890 RRS1Q15050 365 aaKnown RBP21.45■■□□□ 1.02
ATP2A3-201ENST00000309890 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.02
ATP2A3-201ENST00000309890 NLRP2Q9NX02 1062 aa21.45■■□□□ 1.02
ATP2A3-201ENST00000309890 ERICH2A1L162 156 aa21.43■■□□□ 1.02
ATP2A3-201ENST00000309890 NSD2O96028 1365 aa21.43■■□□□ 1.02
ATP2A3-201ENST00000309890 EVA1CP58658 441 aa21.43■■□□□ 1.02
ATP2A3-201ENST00000309890 DHX29Q7Z478 1369 aaKnown RBP21.43■■□□□ 1.02
ATP2A3-201ENST00000309890 CCDC47Q96A33 483 aaKnown RBP21.42■■□□□ 1.02
ATP2A3-201ENST00000309890 RRP9O43818 475 aaKnown RBP21.42■■□□□ 1.02
ATP2A3-201ENST00000309890 BMP2KLQ5H9B9 411 aa21.42■■□□□ 1.02
ATP2A3-201ENST00000309890 ZSCAN31Q96LW9 406 aaPredicted RBP21.42■■□□□ 1.02
ATP2A3-201ENST00000309890 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 PDIA4P13667 645 aaKnown RBP21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 RBM10P98175 930 aaKnown RBP21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 OLFM4Q6UX06 510 aa21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 ZNF396Q96N95 335 aaPredicted RBP21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 LARP1BQ659C4 914 aaKnown RBP21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 TNPO1Q92973 898 aaKnown RBP21.41■■□□□ 1.02
ATP2A3-201ENST00000309890 RAPGEF3O95398 923 aa21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 FAM135AQ9P2D6 1515 aa21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 TCOF1Q13428 1488 aaKnown RBP21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 TMX4Q9H1E5 349 aaPredicted RBP21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 EXOC6BQ9Y2D4 811 aa21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 DNAJC2Q99543 621 aaKnown RBP21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 DHX16O60231 1041 aaKnown RBP21.4■■□□□ 1.02
ATP2A3-201ENST00000309890 SPC24Q8NBT2 197 aa21.39■■□□□ 1.02
ATP2A3-201ENST00000309890 TNMDQ9H2S6 317 aa21.39■■□□□ 1.02
ATP2A3-201ENST00000309890 IL1RAPL2Q9NP60 686 aa21.39■■□□□ 1.02
ATP2A3-201ENST00000309890 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.01
ATP2A3-201ENST00000309890 NUDT16Q96DE0 195 aaKnown RBP21.38■■□□□ 1.01
ATP2A3-201ENST00000309890 IL16Q14005 1332 aa21.38■■□□□ 1.01
ATP2A3-201ENST00000309890 NUP160Q12769 1436 aa21.37■■□□□ 1.01
ATP2A3-201ENST00000309890 SYCE3A1L190 88 aa21.37■■□□□ 1.01
ATP2A3-201ENST00000309890 MX1P20591 662 aa21.37■■□□□ 1.01
ATP2A3-201ENST00000309890 PRAG1Q86YV5 1406 aa21.37■■□□□ 1.01
ATP2A3-201ENST00000309890 CFAP43Q8NDM7 1665 aa21.37■■□□□ 1.01
ATP2A3-201ENST00000309890 HDAC1Q13547 482 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 STK38Q15208 465 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 PDRG1Q9NUG6 133 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 MAP4K4O95819 1239 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 SSFA2P28290 1259 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 ZNF530Q6P9A1 599 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 UQCRHLA0A096LP55 91 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 UQCRHP07919 91 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 PCMTD1Q96MG8 357 aaPredicted RBP21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 JAKMIP1Q96N16 626 aaKnown RBP21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 PPP6R1Q9UPN7 881 aa21.36■■□□□ 1.01
ATP2A3-201ENST00000309890 C8orf34Q49A92 452 aa21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 MPNDQ8N594 471 aa21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 AMOTL1Q8IY63 956 aa21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 DHX8Q14562 1220 aaKnown RBP21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 ASXL1Q8IXJ9 1541 aa21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 CWC27Q6UX04 472 aaKnown RBP21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 PCDHB15Q9Y5E8 787 aa21.35■■□□□ 1.01
ATP2A3-201ENST00000309890 SMC2O95347 1197 aa21.34■■□□□ 1.01
ATP2A3-201ENST00000309890 FMNL2Q96PY5 1086 aa21.34■■□□□ 1.01
ATP2A3-201ENST00000309890 C14orf93Q9H972 538 aaKnown RBP21.34■■□□□ 1.01
ATP2A3-201ENST00000309890 UPF3BQ9BZI7 483 aaKnown RBP21.34■■□□□ 1.01
ATP2A3-201ENST00000309890 CCP110O43303 1012 aa21.34■■□□□ 1.01
ATP2A3-201ENST00000309890 TBC1D9Q6ZT07 1266 aa21.33■■□□□ 1.01
ATP2A3-201ENST00000309890 KIF1BPQ96EK5 621 aa21.33■■□□□ 1.01
ATP2A3-201ENST00000309890 CEBPZQ03701 1054 aaKnown RBP21.33■■□□□ 1.01
ATP2A3-201ENST00000309890 DCTN1Q14203 1278 aa21.33■■□□□ 1.01
ATP2A3-201ENST00000309890 NUP62CLQ9H1M0 184 aa21.33■■□□□ 1.01
ATP2A3-201ENST00000309890 SMARCA5O60264 1052 aaPredicted RBP21.33■■□□□ 1
ATP2A3-201ENST00000309890 AACSQ86V21 672 aa21.33■■□□□ 1
ATP2A3-201ENST00000309890 VPS37DQ86XT2 251 aa21.33■■□□□ 1
ATP2A3-201ENST00000309890 UNC13AQ9UPW8 1703 aa21.33■■□□□ 1
ATP2A3-201ENST00000309890 MCM10Q7L590 875 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 ACBD3Q9H3P7 528 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 XBP1P17861 261 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 STK3Q13188 491 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 JMYQ8N9B5 988 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 CEP89Q96ST8 783 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 NOL10Q9BSC4 688 aaKnown RBP21.32■■□□□ 1
ATP2A3-201ENST00000309890 KRT32Q14532 448 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 SPATA32Q96LK8 384 aa21.32■■□□□ 1
ATP2A3-201ENST00000309890 TESK2Q96S53 571 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 GLRX3O76003 335 aaKnown RBP21.31■■□□□ 1
ATP2A3-201ENST00000309890 PDILTQ8N807 584 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 CCDC112Q8NEF3 446 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 TBC1D2BQ9UPU7 963 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 NOS1P29475 1434 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 RAB11FIP3O75154 756 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 PLEKHH1Q9ULM0 1364 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 SART3Q15020 963 aaKnown RBP21.31■■□□□ 1
ATP2A3-201ENST00000309890 SIL1Q9H173 461 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 CFAP45Q9UL16 551 aa21.31■■□□□ 1
ATP2A3-201ENST00000309890 G3V3G9 751 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 DCAF8Q5TAQ9 597 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 ADGRL1O94910 1474 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms