RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 NUTM2GQ5VZR2 741 aa27.54■■■□□ 2
ATG4D-201ENST00000309469 FLT4P35916 1363 aa27.54■■■□□ 2
ATG4D-201ENST00000309469 PSME1Q06323 249 aa27.53■■■□□ 2
ATG4D-201ENST00000309469 SULT6B1Q6IMI4 303 aa27.53■■■□□ 2
ATG4D-201ENST00000309469 AMPHP49418 695 aa27.52■■■□□ 2
ATG4D-201ENST00000309469 USP54Q70EL1 1684 aa27.52■■■□□ 2
ATG4D-201ENST00000309469 AEBP1Q8IUX7 1158 aa27.51■■■□□ 2
ATG4D-201ENST00000309469 EXOSC9Q06265 439 aaKnown RBP27.51■■□□□ 1.99
ATG4D-201ENST00000309469 PDE3AQ14432 1141 aa27.51■■□□□ 1.99
ATG4D-201ENST00000309469 CALD1Q05682 793 aaKnown RBP27.49■■□□□ 1.99
ATG4D-201ENST00000309469 ORAI2Q96SN7 254 aa27.49■■□□□ 1.99
ATG4D-201ENST00000309469 C19orf44Q9H6X5 657 aa27.49■■□□□ 1.99
ATG4D-201ENST00000309469 LMOD3Q0VAK6 560 aa27.49■■□□□ 1.99
ATG4D-201ENST00000309469 KIF24Q5T7B8 1368 aa27.48■■□□□ 1.99
ATG4D-201ENST00000309469 MARF1Q9Y4F3 1742 aaKnown RBP27.48■■□□□ 1.99
ATG4D-201ENST00000309469 CANXP27824 592 aaKnown RBP27.48■■□□□ 1.99
ATG4D-201ENST00000309469 HSPA2P54652 639 aa27.48■■□□□ 1.99
ATG4D-201ENST00000309469 RGPD1P0DJD0 1748 aa27.47■■□□□ 1.99
ATG4D-201ENST00000309469 ARHGEF10O15013 1369 aa27.47■■□□□ 1.99
ATG4D-201ENST00000309469 FRAT1Q92837 279 aaPredicted RBP27.45■■□□□ 1.99
ATG4D-201ENST00000309469 KDM4FA0A1W2PPD8 638 aa27.45■■□□□ 1.98
ATG4D-201ENST00000309469 THUMPD2Q9BTF0 503 aaKnown RBP27.44■■□□□ 1.98
ATG4D-201ENST00000309469 FOXO3O43524 673 aa27.43■■□□□ 1.98
ATG4D-201ENST00000309469 HOXC9P31274 260 aa27.43■■□□□ 1.98
ATG4D-201ENST00000309469 BCL2L13Q9BXK5 485 aa27.43■■□□□ 1.98
ATG4D-201ENST00000309469 IFT57Q9NWB7 429 aa27.42■■□□□ 1.98
ATG4D-201ENST00000309469 LAS1LQ9Y4W2 734 aaKnown RBP27.41■■□□□ 1.98
ATG4D-201ENST00000309469 C1orf167Q5SNV9 1468 aa27.41■■□□□ 1.98
ATG4D-201ENST00000309469 TMEM94Q12767 1356 aa27.41■■□□□ 1.98
ATG4D-201ENST00000309469 GNAI1P63096 354 aa27.41■■□□□ 1.98
ATG4D-201ENST00000309469 RBM19Q9Y4C8 960 aaKnown RBP27.41■■□□□ 1.98
ATG4D-201ENST00000309469 NCOA3Q9Y6Q9 1424 aa27.4■■□□□ 1.98
ATG4D-201ENST00000309469 EYA1Q99502 592 aa27.4■■□□□ 1.98
ATG4D-201ENST00000309469 IGSF1Q8N6C5 1336 aa27.4■■□□□ 1.98
ATG4D-201ENST00000309469 ZNF853P0CG23 659 aa27.39■■□□□ 1.98
ATG4D-201ENST00000309469 PANK1Q8TE04 598 aa27.39■■□□□ 1.98
ATG4D-201ENST00000309469 KDRP35968 1356 aa27.39■■□□□ 1.97
ATG4D-201ENST00000309469 FAM83GA6ND36 823 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 ATF3P18847 181 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 KCNH5Q8NCM2 988 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 RTL1A6NKG5 1358 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 SSH1Q8WYL5 1049 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 SMC4Q9NTJ3 1288 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 STRCP1A6NGW2 1772 aa27.37■■□□□ 1.97
ATG4D-201ENST00000309469 XPCQ01831 940 aaPredicted RBP27.36■■□□□ 1.97
ATG4D-201ENST00000309469 CFAP44Q96MT7 982 aa27.36■■□□□ 1.97
ATG4D-201ENST00000309469 COG6Q9Y2V7 657 aa27.36■■□□□ 1.97
ATG4D-201ENST00000309469 DLG5Q8TDM6 1919 aa27.36■■□□□ 1.97
ATG4D-201ENST00000309469 MYT1Q01538 1121 aa27.35■■□□□ 1.97
ATG4D-201ENST00000309469 NFAT5O94916 1531 aa27.35■■□□□ 1.97
ATG4D-201ENST00000309469 DCTN1Q14203 1278 aa27.35■■□□□ 1.97
ATG4D-201ENST00000309469 KRT28Q7Z3Y7 464 aa27.35■■□□□ 1.97
ATG4D-201ENST00000309469 DCCP43146 1447 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 ZKSCAN2Q63HK3 967 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 MBIPQ9NS73 344 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 LMTK3Q96Q04 1460 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 KIF1AQ12756 1690 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 KDM2BQ8NHM5 1336 aa27.34■■□□□ 1.97
ATG4D-201ENST00000309469 IP6K1Q92551 441 aa27.33■■□□□ 1.97
ATG4D-201ENST00000309469 ZNF428Q96B54 188 aa27.33■■□□□ 1.97
ATG4D-201ENST00000309469 TNNQ9UQP3 1299 aa27.33■■□□□ 1.97
ATG4D-201ENST00000309469 MST1RQ04912 1400 aa27.33■■□□□ 1.96
ATG4D-201ENST00000309469 ALDH1L2Q3SY69 923 aa27.32■■□□□ 1.96
ATG4D-201ENST00000309469 RLBP1P12271 317 aa27.31■■□□□ 1.96
ATG4D-201ENST00000309469 CENPQQ7L2Z9 268 aaPredicted RBP27.31■■□□□ 1.96
ATG4D-201ENST00000309469 MS4A1P11836 297 aa27.3■■□□□ 1.96
ATG4D-201ENST00000309469 MTHFSDQ2M296 383 aaKnown RBP27.3■■□□□ 1.96
ATG4D-201ENST00000309469 LTV1Q96GA3 475 aaPredicted RBP27.3■■□□□ 1.96
ATG4D-201ENST00000309469 VAMP4O75379 141 aa27.29■■□□□ 1.96
ATG4D-201ENST00000309469 AAMPQ13685 434 aa27.29■■□□□ 1.96
ATG4D-201ENST00000309469 CADPS2Q86UW7 1296 aa27.29■■□□□ 1.96
ATG4D-201ENST00000309469 GCP02774 474 aa27.28■■□□□ 1.96
ATG4D-201ENST00000309469 CLUAP1Q96AJ1 413 aa27.28■■□□□ 1.96
ATG4D-201ENST00000309469 TRPM3Q9HCF6 1732 aaPredicted RBP27.28■■□□□ 1.96
ATG4D-201ENST00000309469 LMOD2Q6P5Q4 547 aa27.28■■□□□ 1.96
ATG4D-201ENST00000309469 MCM10Q7L590 875 aa27.28■■□□□ 1.96
ATG4D-201ENST00000309469 DZIP1LQ8IYY4 767 aaKnown RBP27.27■■□□□ 1.96
ATG4D-201ENST00000309469 GAS2L2Q8NHY3 880 aa27.27■■□□□ 1.96
ATG4D-201ENST00000309469 NOB1Q9ULX3 412 aaKnown RBP27.27■■□□□ 1.96
ATG4D-201ENST00000309469 SLIT3O75094 1523 aa27.27■■□□□ 1.96
ATG4D-201ENST00000309469 LTN1O94822 1766 aa27.27■■□□□ 1.96
ATG4D-201ENST00000309469 TSPYL6Q8N831 410 aa27.26■■□□□ 1.95
ATG4D-201ENST00000309469 USP19O94966 1318 aa27.25■■□□□ 1.95
ATG4D-201ENST00000309469 KIF16BQ96L93 1317 aa27.25■■□□□ 1.95
ATG4D-201ENST00000309469 BRPF1P55201 1214 aaPredicted RBP27.25■■□□□ 1.95
ATG4D-201ENST00000309469 ATF7IPQ6VMQ6 1270 aa27.25■■□□□ 1.95
ATG4D-201ENST00000309469 FTSJ3Q8IY81 847 aaKnown RBP27.25■■□□□ 1.95
ATG4D-201ENST00000309469 MSH6P52701 1360 aa27.24■■□□□ 1.95
ATG4D-201ENST00000309469 TCERG1O14776 1098 aaKnown RBP27.24■■□□□ 1.95
ATG4D-201ENST00000309469 TRIM27P14373 513 aa27.24■■□□□ 1.95
ATG4D-201ENST00000309469 CHL1O00533 1208 aa27.24■■□□□ 1.95
ATG4D-201ENST00000309469 IPO8O15397 1037 aaKnown RBP27.24■■□□□ 1.95
ATG4D-201ENST00000309469 MVPQ14764 893 aaKnown RBP27.24■■□□□ 1.95
ATG4D-201ENST00000309469 ARHGEF25Q86VW2 580 aa27.24■■□□□ 1.95
ATG4D-201ENST00000309469 STRCQ7RTU9 1775 aa27.23■■□□□ 1.95
ATG4D-201ENST00000309469 ZBTB7CA1YPR0 619 aa27.23■■□□□ 1.95
ATG4D-201ENST00000309469 TWISTNBQ3B726 338 aaPredicted RBP27.23■■□□□ 1.95
ATG4D-201ENST00000309469 C8orf58Q8NAV2 365 aa27.23■■□□□ 1.95
ATG4D-201ENST00000309469 RTF1Q92541 710 aaKnown RBP27.23■■□□□ 1.95
ATG4D-201ENST00000309469 PHRF1Q9P1Y6 1649 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms