RNA–Protein interactions for RNA: ENST00000309285.3

XCR1-201, Transcript of X-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCR1, Length 5,281 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCR1-201ENST00000309285 PDZRN3Q9UPQ7 1066 aa11.34□□□□□ -0.59
XCR1-201ENST00000309285 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
XCR1-201ENST00000309285 ABCA9Q8IUA7 1624 aa11.34□□□□□ -0.59
XCR1-201ENST00000309285 LNPKQ9C0E8 428 aa11.34□□□□□ -0.59
XCR1-201ENST00000309285 CT47B1P0C2W7 299 aaPredicted RBP11.34□□□□□ -0.59
XCR1-201ENST00000309285 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
XCR1-201ENST00000309285 NFE2L2Q16236 605 aa11.33□□□□□ -0.6
XCR1-201ENST00000309285 TWISTNBQ3B726 338 aaPredicted RBP11.33□□□□□ -0.6
XCR1-201ENST00000309285 ZRANB1Q9UGI0 708 aa11.33□□□□□ -0.6
XCR1-201ENST00000309285 INSRP06213 1382 aa11.33□□□□□ -0.6
XCR1-201ENST00000309285 SPHKAPQ2M3C7 1700 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 TNRQ92752 1358 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 ZMYM4Q5VZL5 1548 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 KIF1BO60333 1816 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 CHMP5Q9NZZ3 219 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 ZHX1Q9UKY1 873 aaPredicted RBP11.32□□□□□ -0.6
XCR1-201ENST00000309285 ZMYM3Q14202 1370 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 DCTN1Q14203 1278 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 API5Q9BZZ5 524 aaKnown RBP11.32□□□□□ -0.6
XCR1-201ENST00000309285 AMOTL2Q9Y2J4 779 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 HECW2Q9P2P5 1572 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
XCR1-201ENST00000309285 BCL11BQ9C0K0 894 aaPredicted RBP11.32□□□□□ -0.6
XCR1-201ENST00000309285 ESPNB1AK53 854 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 IGHDP01880 384 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 PSME1Q06323 249 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 ABTB2Q8N961 1025 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
XCR1-201ENST00000309285 ZNF592Q92610 1267 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 NASPP49321 788 aaPredicted RBP11.31□□□□□ -0.6
XCR1-201ENST00000309285 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 TNNQ9UQP3 1299 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 CFAP74Q9C0B2 1584 aa11.31□□□□□ -0.6
XCR1-201ENST00000309285 TRAK2O60296 914 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 STK11IPQ8N1F8 1099 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 MADDQ8WXG6 1647 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 TMEM57Q8N5G2 664 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 TSPYL4Q9UJ04 414 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 ABCC3O15438 1527 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 CCDC27Q2M243 656 aa11.3□□□□□ -0.6
XCR1-201ENST00000309285 RNF17Q9BXT8 1623 aaKnown RBP11.3□□□□□ -0.6
XCR1-201ENST00000309285 TRIM27P14373 513 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 SYNMO15061 1565 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 HSP90B1P14625 803 aaKnown RBP11.29□□□□□ -0.6
XCR1-201ENST00000309285 BBXQ8WY36 941 aaPredicted RBP11.29□□□□□ -0.6
XCR1-201ENST00000309285 CREBRFQ8IUR6 639 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 MAP3K4Q9Y6R4 1608 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 RLBP1P12271 317 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 FOXD4L6Q3SYB3 417 aaPredicted RBP11.29□□□□□ -0.6
XCR1-201ENST00000309285 FOXD4L3Q6VB84 417 aaPredicted RBP11.29□□□□□ -0.6
XCR1-201ENST00000309285 RBM33Q96EV2 1170 aaKnown RBP11.29□□□□□ -0.6
XCR1-201ENST00000309285 ABCC11Q96J66 1382 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 CCDC66A2RUB6 948 aa11.29□□□□□ -0.6
XCR1-201ENST00000309285 HMMRO75330 724 aa11.28□□□□□ -0.6
XCR1-201ENST00000309285 RASSF8Q8NHQ8 419 aa11.28□□□□□ -0.6
XCR1-201ENST00000309285 ACEP12821 1306 aa11.28□□□□□ -0.6
XCR1-201ENST00000309285 ZNF521Q96K83 1311 aa11.28□□□□□ -0.6
XCR1-201ENST00000309285 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
XCR1-201ENST00000309285 INO80Q9ULG1 1556 aaPredicted RBP11.28□□□□□ -0.6
XCR1-201ENST00000309285 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
XCR1-201ENST00000309285 PPIP5K1Q6PFW1 1433 aa11.27□□□□□ -0.6
XCR1-201ENST00000309285 FAM83GA6ND36 823 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 MCM10Q7L590 875 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 PDCL3Q9H2J4 239 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 UQCRHLA0A096LP55 91 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 HTATSF1O43719 755 aaKnown RBP11.27□□□□□ -0.61
XCR1-201ENST00000309285 UQCRHP07919 91 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 EVA1CP58658 441 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 ESCO1Q5FWF5 840 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 CHMP4AQ9BY43 222 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 SYTL4Q96C24 671 aaPredicted RBP11.27□□□□□ -0.61
XCR1-201ENST00000309285 PHACTR3Q96KR7 559 aa11.27□□□□□ -0.61
XCR1-201ENST00000309285 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
XCR1-201ENST00000309285 CFAP44Q96MT7 982 aa11.26□□□□□ -0.61
XCR1-201ENST00000309285 PHF14O94880 888 aa11.26□□□□□ -0.61
XCR1-201ENST00000309285 FKBP5Q13451 457 aaPredicted RBP11.26□□□□□ -0.61
XCR1-201ENST00000309285 EIF2S2P20042 333 aaKnown RBP11.26□□□□□ -0.61
XCR1-201ENST00000309285 ZNF428Q96B54 188 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 GPATCH3Q96I76 525 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 MIS18AQ9NYP9 233 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 TEFQ10587 303 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 HSP90AB2PQ58FF8 381 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 ANKLE2Q86XL3 938 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 TSPOAP1O95153 1857 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 TEX35Q5T0J7 233 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 VPS53Q5VIR6 699 aa11.25□□□□□ -0.61
XCR1-201ENST00000309285 KIDINS220Q9ULH0 1771 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 SLC4A2P04920 1241 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 IFT57Q9NWB7 429 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 CEP152O94986 1710 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 RRP12Q5JTH9 1297 aaKnown RBP11.24□□□□□ -0.61
XCR1-201ENST00000309285 GAS2L2Q8NHY3 880 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 HDAC5Q9UQL6 1122 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 TTC21BQ7Z4L5 1316 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 PPRC1Q5VV67 1664 aaKnown RBP11.24□□□□□ -0.61
XCR1-201ENST00000309285 TRMT2AQ8IZ69 625 aaKnown RBP11.24□□□□□ -0.61
XCR1-201ENST00000309285 RNF214Q8ND24 703 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 IL16Q14005 1332 aa11.24□□□□□ -0.61
XCR1-201ENST00000309285 GRPEL1Q9HAV7 217 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms