RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 AKAP12Q02952 1782 aa14.66□□□□□ -0.06
SCG2-201ENST00000305409 OVOS2A0A0J9YW53 1432 aa14.66□□□□□ -0.06
SCG2-201ENST00000305409 OVOS2Q6IE36 1432 aa14.66□□□□□ -0.06
SCG2-201ENST00000305409 NPM2Q86SE8 214 aaKnown RBP14.66□□□□□ -0.06
SCG2-201ENST00000305409 XPCQ01831 940 aaPredicted RBP14.66□□□□□ -0.06
SCG2-201ENST00000305409 CENPQQ7L2Z9 268 aaPredicted RBP14.66□□□□□ -0.06
SCG2-201ENST00000305409 TSPYL6Q8N831 410 aa14.66□□□□□ -0.06
SCG2-201ENST00000305409 ABTB2Q8N961 1025 aa14.66□□□□□ -0.06
SCG2-201ENST00000305409 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
SCG2-201ENST00000305409 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
SCG2-201ENST00000305409 NOB1Q9ULX3 412 aaKnown RBP14.65□□□□□ -0.06
SCG2-201ENST00000305409 PDE4AP27815 886 aa14.65□□□□□ -0.06
SCG2-201ENST00000305409 AMPHP49418 695 aa14.65□□□□□ -0.06
SCG2-201ENST00000305409 ESCO1Q5FWF5 840 aa14.65□□□□□ -0.06
SCG2-201ENST00000305409 SSH2Q76I76 1423 aa14.65□□□□□ -0.06
SCG2-201ENST00000305409 ZBTB7CA1YPR0 619 aa14.64□□□□□ -0.07
SCG2-201ENST00000305409 FTSJ3Q8IY81 847 aaKnown RBP14.64□□□□□ -0.07
SCG2-201ENST00000305409 PCDHB15Q9Y5E8 787 aa14.64□□□□□ -0.07
SCG2-201ENST00000305409 FOXO3O43524 673 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 TRIM27P14373 513 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 ZKSCAN2Q63HK3 967 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 MCM10Q7L590 875 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 MBIPQ9NS73 344 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 TOPAZ1Q8N9V7 1692 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 IL16Q14005 1332 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 ERICH6Q7L0X2 663 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 PHF8Q9UPP1 1060 aa14.63□□□□□ -0.07
SCG2-201ENST00000305409 TTC21AQ8NDW8 1320 aa14.62□□□□□ -0.07
SCG2-201ENST00000305409 DZIP1LQ8IYY4 767 aaKnown RBP14.62□□□□□ -0.07
SCG2-201ENST00000305409 ORAI2Q96SN7 254 aa14.62□□□□□ -0.07
SCG2-201ENST00000305409 XRN1Q8IZH2 1706 aaKnown RBP14.61□□□□□ -0.07
SCG2-201ENST00000305409 KRT24Q2M2I5 525 aa14.61□□□□□ -0.07
SCG2-201ENST00000305409 USP31Q70CQ4 1352 aa14.61□□□□□ -0.07
SCG2-201ENST00000305409 ITPRIPQ8IWB1 547 aa14.61□□□□□ -0.07
SCG2-201ENST00000305409 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 C8orf58Q8NAV2 365 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 BCL11AQ9H165 835 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 MIS18AQ9NYP9 233 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 ADAMTSL3P82987 1691 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 LMOD2Q6P5Q4 547 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 EYA1Q99502 592 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
SCG2-201ENST00000305409 PSME1Q06323 249 aa14.59□□□□□ -0.07
SCG2-201ENST00000305409 MVPQ14764 893 aaKnown RBP14.59□□□□□ -0.07
SCG2-201ENST00000305409 BACH2Q9BYV9 841 aa14.59□□□□□ -0.07
SCG2-201ENST00000305409 PEAK1Q9H792 1746 aa14.59□□□□□ -0.07
SCG2-201ENST00000305409 ATF7IPQ6VMQ6 1270 aa14.59□□□□□ -0.07
SCG2-201ENST00000305409 USHBP1Q8N6Y0 703 aa14.59□□□□□ -0.07
SCG2-201ENST00000305409 NPHP4O75161 1426 aaPredicted RBP14.58□□□□□ -0.07
SCG2-201ENST00000305409 VAMP4O75379 141 aa14.58□□□□□ -0.08
SCG2-201ENST00000305409 GNAI1P63096 354 aa14.58□□□□□ -0.08
SCG2-201ENST00000305409 TMEM57Q8N5G2 664 aa14.58□□□□□ -0.08
SCG2-201ENST00000305409 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
SCG2-201ENST00000305409 IFT57Q9NWB7 429 aa14.58□□□□□ -0.08
SCG2-201ENST00000305409 HSPA2P54652 639 aa14.57□□□□□ -0.08
SCG2-201ENST00000305409 PROSER2Q86WR7 435 aaPredicted RBP14.57□□□□□ -0.08
SCG2-201ENST00000305409 SETD1BQ9UPS6 1966 aaKnown RBP14.57□□□□□ -0.08
SCG2-201ENST00000305409 ZNF853P0CG23 659 aa14.57□□□□□ -0.08
SCG2-201ENST00000305409 MTHFSDQ2M296 383 aaKnown RBP14.57□□□□□ -0.08
SCG2-201ENST00000305409 CFAP44Q96MT7 982 aa14.57□□□□□ -0.08
SCG2-201ENST00000305409 MS4A1P11836 297 aa14.56□□□□□ -0.08
SCG2-201ENST00000305409 FLT4P35916 1363 aa14.56□□□□□ -0.08
SCG2-201ENST00000305409 HOXC9P31274 260 aa14.56□□□□□ -0.08
SCG2-201ENST00000305409 TWISTNBQ3B726 338 aaPredicted RBP14.56□□□□□ -0.08
SCG2-201ENST00000305409 SBNO1A3KN83 1393 aa14.55□□□□□ -0.08
SCG2-201ENST00000305409 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
SCG2-201ENST00000305409 LMOD3Q0VAK6 560 aa14.55□□□□□ -0.08
SCG2-201ENST00000305409 CALD1Q05682 793 aaKnown RBP14.55□□□□□ -0.08
SCG2-201ENST00000305409 PIK3C2AO00443 1686 aa14.54□□□□□ -0.08
SCG2-201ENST00000305409 ANP32AP39687 249 aaKnown RBP14.54□□□□□ -0.08
SCG2-201ENST00000305409 DDX17Q92841 729 aaKnown RBP14.54□□□□□ -0.08
SCG2-201ENST00000305409 NALCNQ8IZF0 1738 aa14.53□□□□□ -0.08
SCG2-201ENST00000305409 MRPL50Q8N5N7 158 aaKnown RBP14.53□□□□□ -0.08
SCG2-201ENST00000305409 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
SCG2-201ENST00000305409 FMN2Q9NZ56 1722 aa14.52□□□□□ -0.09
SCG2-201ENST00000305409 ADGRL3Q9HAR2 1447 aa14.52□□□□□ -0.09
SCG2-201ENST00000305409 ALDH1L2Q3SY69 923 aa14.52□□□□□ -0.09
SCG2-201ENST00000305409 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.09
SCG2-201ENST00000305409 KIF16BQ96L93 1317 aa14.51□□□□□ -0.09
SCG2-201ENST00000305409 IPO8O15397 1037 aaKnown RBP14.51□□□□□ -0.09
SCG2-201ENST00000305409 DLG5Q8TDM6 1919 aa14.51□□□□□ -0.09
SCG2-201ENST00000305409 PDZRN3Q9UPQ7 1066 aa14.51□□□□□ -0.09
SCG2-201ENST00000305409 ZNF142P52746 1687 aaPredicted RBP14.5□□□□□ -0.09
SCG2-201ENST00000305409 C8orf34Q49A92 452 aa14.5□□□□□ -0.09
SCG2-201ENST00000305409 RTF1Q92541 710 aaKnown RBP14.5□□□□□ -0.09
SCG2-201ENST00000305409 IGSF1Q8N6C5 1336 aa14.5□□□□□ -0.09
SCG2-201ENST00000305409 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
SCG2-201ENST00000305409 DDX19BQ9UMR2 479 aa14.5□□□□□ -0.09
SCG2-201ENST00000305409 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
SCG2-201ENST00000305409 ANP32EQ9BTT0 268 aa14.49□□□□□ -0.09
SCG2-201ENST00000305409 RWDD1Q9H446 243 aaPredicted RBP14.49□□□□□ -0.09
SCG2-201ENST00000305409 CHL1O00533 1208 aa14.49□□□□□ -0.09
SCG2-201ENST00000305409 FAM161AQ3B820 660 aa14.48□□□□□ -0.09
SCG2-201ENST00000305409 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
SCG2-201ENST00000305409 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
SCG2-201ENST00000305409 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
SCG2-201ENST00000305409 IPO9Q96P70 1041 aaKnown RBP14.48□□□□□ -0.09
SCG2-201ENST00000305409 ZBTB40Q9NUA8 1239 aa14.48□□□□□ -0.09
SCG2-201ENST00000305409 TSPYL4Q9UJ04 414 aa14.47□□□□□ -0.09
SCG2-201ENST00000305409 KRT28Q7Z3Y7 464 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms