RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 NOB1Q9ULX3 412 aaKnown RBP9.25□□□□□ -0.93
RGPD3-201ENST00000304514 USP6P35125 1406 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 FBLN1P23142 703 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 NME9Q86XW9 330 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.25□□□□□ -0.93
RGPD3-201ENST00000304514 PDZRN3Q9UPQ7 1066 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 USP35Q9P2H5 1018 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 ZRANB1Q9UGI0 708 aa9.25□□□□□ -0.93
RGPD3-201ENST00000304514 NUDT16Q96DE0 195 aaKnown RBP9.24□□□□□ -0.93
RGPD3-201ENST00000304514 PHACTR3Q96KR7 559 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 NCKAP5LQ9HCH0 1330 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 NFE2L2Q16236 605 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 RGS12O14924 1447 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 ATF7IPQ6VMQ6 1270 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 TXNDC2Q86VQ3 553 aa9.24□□□□□ -0.93
RGPD3-201ENST00000304514 LAS1LQ9Y4W2 734 aaKnown RBP9.24□□□□□ -0.93
RGPD3-201ENST00000304514 PRKAR2BP31323 418 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 SMC4Q9NTJ3 1288 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 CEP170BQ9Y4F5 1589 aaPredicted RBP9.23□□□□□ -0.93
RGPD3-201ENST00000304514 RWDD1Q9H446 243 aaPredicted RBP9.23□□□□□ -0.93
RGPD3-201ENST00000304514 ZBTB40Q9NUA8 1239 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 IFT57Q9NWB7 429 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 KDM3BQ7LBC6 1761 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 CAMTA1Q9Y6Y1 1673 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 MRPL50Q8N5N7 158 aaKnown RBP9.23□□□□□ -0.93
RGPD3-201ENST00000304514 BCL11AQ9H165 835 aa9.23□□□□□ -0.93
RGPD3-201ENST00000304514 PPM1GO15355 546 aaPredicted RBP9.22□□□□□ -0.93
RGPD3-201ENST00000304514 MLECQ14165 292 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 DDX19BQ9UMR2 479 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 RGPD2P0DJD1 1756 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 ABCC4O15439 1325 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 KIF16BQ96L93 1317 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 LMO7Q8WWI1 1683 aa9.22□□□□□ -0.93
RGPD3-201ENST00000304514 SLC4A3P48751 1232 aa9.21□□□□□ -0.93
RGPD3-201ENST00000304514 KIF24Q5T7B8 1368 aa9.21□□□□□ -0.94
RGPD3-201ENST00000304514 FTSJ3Q8IY81 847 aaKnown RBP9.21□□□□□ -0.94
RGPD3-201ENST00000304514 MBIPQ9NS73 344 aa9.21□□□□□ -0.94
RGPD3-201ENST00000304514 CRB1P82279 1406 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 ARHGEF10O15013 1369 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 NEFMP07197 916 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 LTKP29376 864 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 ZNF428Q96B54 188 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 TBC1D32Q96NH3 1257 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 VAMP4O75379 141 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 MED1Q15648 1581 aaPredicted RBP9.2□□□□□ -0.94
RGPD3-201ENST00000304514 SMC5Q8IY18 1101 aa9.2□□□□□ -0.94
RGPD3-201ENST00000304514 HMOX1P09601 288 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 ITPRIPQ8IWB1 547 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 ARHGAP45Q92619 1136 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 SIPA1L3O60292 1781 aaPredicted RBP9.19□□□□□ -0.94
RGPD3-201ENST00000304514 ZNF692Q9BU19 519 aaPredicted RBP9.19□□□□□ -0.94
RGPD3-201ENST00000304514 PLEKHG3A1L390 1219 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 NUCB1Q02818 461 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 RRS1Q15050 365 aaKnown RBP9.19□□□□□ -0.94
RGPD3-201ENST00000304514 CCDC61Q9Y6R9 512 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 TRPM3Q9HCF6 1732 aaPredicted RBP9.19□□□□□ -0.94
RGPD3-201ENST00000304514 ANKARQ7Z5J8 1434 aa9.19□□□□□ -0.94
RGPD3-201ENST00000304514 TSPYL6Q8N831 410 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 COG3Q96JB2 828 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 CRYBG1Q9Y4K1 1723 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 ADAMTSL3P82987 1691 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
RGPD3-201ENST00000304514 HDGFP51858 240 aaKnown RBP9.18□□□□□ -0.94
RGPD3-201ENST00000304514 NFKBIBQ15653 356 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 NCOA3Q9Y6Q9 1424 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 NFAT5O94916 1531 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 CFAP44Q96MT7 982 aa9.18□□□□□ -0.94
RGPD3-201ENST00000304514 ACEP12821 1306 aa9.17□□□□□ -0.94
RGPD3-201ENST00000304514 EIF4A2Q14240 407 aaKnown RBP9.17□□□□□ -0.94
RGPD3-201ENST00000304514 RTL5Q5HYW3 569 aaPredicted RBP9.17□□□□□ -0.94
RGPD3-201ENST00000304514 ANTXR1Q9H6X2 564 aa9.17□□□□□ -0.94
RGPD3-201ENST00000304514 GNAI1P63096 354 aa9.17□□□□□ -0.94
RGPD3-201ENST00000304514 THUMPD2Q9BTF0 503 aaKnown RBP9.17□□□□□ -0.94
RGPD3-201ENST00000304514 CALD1Q05682 793 aaKnown RBP9.17□□□□□ -0.94
RGPD3-201ENST00000304514 CACNA1FO60840 1977 aa9.16□□□□□ -0.94
RGPD3-201ENST00000304514 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
RGPD3-201ENST00000304514 ADAMTS7Q9UKP4 1686 aa9.16□□□□□ -0.94
RGPD3-201ENST00000304514 KDRP35968 1356 aa9.16□□□□□ -0.94
RGPD3-201ENST00000304514 KIAA0232Q92628 1395 aa9.16□□□□□ -0.94
RGPD3-201ENST00000304514 ATP10DQ9P241 1426 aa9.16□□□□□ -0.94
RGPD3-201ENST00000304514 FAM83GA6ND36 823 aa9.15□□□□□ -0.94
RGPD3-201ENST00000304514 C8orf58Q8NAV2 365 aa9.15□□□□□ -0.94
RGPD3-201ENST00000304514 SBNO1A3KN83 1393 aa9.15□□□□□ -0.95
RGPD3-201ENST00000304514 SIRT2Q8IXJ6 389 aa9.15□□□□□ -0.95
RGPD3-201ENST00000304514 LMOD3Q0VAK6 560 aa9.14□□□□□ -0.95
RGPD3-201ENST00000304514 TTC21AQ8NDW8 1320 aa9.14□□□□□ -0.95
RGPD3-201ENST00000304514 AEBP1Q8IUX7 1158 aa9.14□□□□□ -0.95
RGPD3-201ENST00000304514 TWISTNBQ3B726 338 aaPredicted RBP9.13□□□□□ -0.95
RGPD3-201ENST00000304514 CHD1LQ86WJ1 897 aa9.13□□□□□ -0.95
RGPD3-201ENST00000304514 RTL1A6NKG5 1358 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 TBC1D2Q9BYX2 928 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 ESF1Q9H501 851 aaKnown RBP9.12□□□□□ -0.95
RGPD3-201ENST00000304514 SLIT3O75094 1523 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 MSH6P52701 1360 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 GCC1Q96CN9 775 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 RGPD5Q99666 1765 aa9.12□□□□□ -0.95
RGPD3-201ENST00000304514 ALS2Q96Q42 1657 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms