RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 ORAI2Q96SN7 254 aa18.8■□□□□ 0.6
SHCBP1-201ENST00000303383 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
SHCBP1-201ENST00000303383 ZBTB7CA1YPR0 619 aa18.79■□□□□ 0.6
SHCBP1-201ENST00000303383 TRIM35Q9UPQ4 493 aa18.79■□□□□ 0.6
SHCBP1-201ENST00000303383 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
SHCBP1-201ENST00000303383 FLT4P35916 1363 aa18.79■□□□□ 0.6
SHCBP1-201ENST00000303383 CALD1Q05682 793 aaKnown RBP18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 LMOD3Q0VAK6 560 aa18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 PHACTR3Q96KR7 559 aa18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 NWD1Q149M9 1564 aa18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 XPCQ01831 940 aaPredicted RBP18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 SBNO1A3KN83 1393 aa18.78■□□□□ 0.6
SHCBP1-201ENST00000303383 BCAR3O75815 825 aa18.77■□□□□ 0.6
SHCBP1-201ENST00000303383 TSR2Q969E8 191 aaKnown RBP18.77■□□□□ 0.59
SHCBP1-201ENST00000303383 TMEM94Q12767 1356 aa18.77■□□□□ 0.59
SHCBP1-201ENST00000303383 FRAT1Q92837 279 aaPredicted RBP18.76■□□□□ 0.59
SHCBP1-201ENST00000303383 IL16Q14005 1332 aa18.75■□□□□ 0.59
SHCBP1-201ENST00000303383 PIK3C2AO00443 1686 aa18.75■□□□□ 0.59
SHCBP1-201ENST00000303383 AEBP1Q8IUX7 1158 aa18.75■□□□□ 0.59
SHCBP1-201ENST00000303383 FANCIQ9NVI1 1328 aa18.74■□□□□ 0.59
SHCBP1-201ENST00000303383 LTV1Q96GA3 475 aaPredicted RBP18.74■□□□□ 0.59
SHCBP1-201ENST00000303383 C20orf194Q5TEA3 1177 aa18.73■□□□□ 0.59
SHCBP1-201ENST00000303383 KRT28Q7Z3Y7 464 aa18.73■□□□□ 0.59
SHCBP1-201ENST00000303383 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
SHCBP1-201ENST00000303383 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
SHCBP1-201ENST00000303383 CADPS2Q86UW7 1296 aa18.72■□□□□ 0.59
SHCBP1-201ENST00000303383 BCL2L13Q9BXK5 485 aa18.72■□□□□ 0.59
SHCBP1-201ENST00000303383 MSH6P52701 1360 aa18.71■□□□□ 0.59
SHCBP1-201ENST00000303383 HOXC9P31274 260 aa18.71■□□□□ 0.59
SHCBP1-201ENST00000303383 RARSP54136 660 aaKnown RBP18.71■□□□□ 0.59
SHCBP1-201ENST00000303383 CT47B1P0C2W7 299 aaPredicted RBP18.7■□□□□ 0.58
SHCBP1-201ENST00000303383 C1orf167Q5SNV9 1468 aa18.7■□□□□ 0.58
SHCBP1-201ENST00000303383 THUMPD2Q9BTF0 503 aaKnown RBP18.7■□□□□ 0.58
SHCBP1-201ENST00000303383 GNAI1P63096 354 aa18.69■□□□□ 0.58
SHCBP1-201ENST00000303383 KIF24Q5T7B8 1368 aa18.69■□□□□ 0.58
SHCBP1-201ENST00000303383 PEAK1Q9H792 1746 aa18.69■□□□□ 0.58
SHCBP1-201ENST00000303383 ARHGEF10O15013 1369 aa18.69■□□□□ 0.58
SHCBP1-201ENST00000303383 SMC4Q9NTJ3 1288 aa18.68■□□□□ 0.58
SHCBP1-201ENST00000303383 EYA1Q99502 592 aa18.68■□□□□ 0.58
SHCBP1-201ENST00000303383 RTF1Q92541 710 aaKnown RBP18.67■□□□□ 0.58
SHCBP1-201ENST00000303383 NCOA3Q9Y6Q9 1424 aa18.67■□□□□ 0.58
SHCBP1-201ENST00000303383 LMTK3Q96Q04 1460 aa18.66■□□□□ 0.58
SHCBP1-201ENST00000303383 PDE3AQ14432 1141 aa18.66■□□□□ 0.58
SHCBP1-201ENST00000303383 TSHZ2Q9NRE2 1034 aa18.66■□□□□ 0.58
SHCBP1-201ENST00000303383 FAM83GA6ND36 823 aa18.65■□□□□ 0.58
SHCBP1-201ENST00000303383 IFT57Q9NWB7 429 aa18.65■□□□□ 0.58
SHCBP1-201ENST00000303383 DCTN1Q14203 1278 aa18.65■□□□□ 0.58
SHCBP1-201ENST00000303383 DCCP43146 1447 aa18.64■□□□□ 0.58
SHCBP1-201ENST00000303383 GCP02774 474 aa18.64■□□□□ 0.57
SHCBP1-201ENST00000303383 IP6K1Q92551 441 aa18.64■□□□□ 0.57
SHCBP1-201ENST00000303383 RTL1A6NKG5 1358 aa18.64■□□□□ 0.57
SHCBP1-201ENST00000303383 FTSJ3Q8IY81 847 aaKnown RBP18.64■□□□□ 0.57
SHCBP1-201ENST00000303383 IGSF1Q8N6C5 1336 aa18.63■□□□□ 0.57
SHCBP1-201ENST00000303383 GAS2L2Q8NHY3 880 aa18.63■□□□□ 0.57
SHCBP1-201ENST00000303383 NPHP3Q7Z494 1330 aa18.63■□□□□ 0.57
SHCBP1-201ENST00000303383 PANK1Q8TE04 598 aa18.63■□□□□ 0.57
SHCBP1-201ENST00000303383 KIF1AQ12756 1690 aa18.63■□□□□ 0.57
SHCBP1-201ENST00000303383 MS4A1P11836 297 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 MST1RQ04912 1400 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 CLUAP1Q96AJ1 413 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 CFAP44Q96MT7 982 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 COG6Q9Y2V7 657 aa18.62■□□□□ 0.57
SHCBP1-201ENST00000303383 ZNF335Q9H4Z2 1342 aaPredicted RBP18.61■□□□□ 0.57
SHCBP1-201ENST00000303383 MCM10Q7L590 875 aa18.61■□□□□ 0.57
SHCBP1-201ENST00000303383 DDX17Q92841 729 aaKnown RBP18.61■□□□□ 0.57
SHCBP1-201ENST00000303383 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
SHCBP1-201ENST00000303383 MBIPQ9NS73 344 aa18.6■□□□□ 0.57
SHCBP1-201ENST00000303383 ELL2O00472 640 aaPredicted RBP18.6■□□□□ 0.57
SHCBP1-201ENST00000303383 SSH1Q8WYL5 1049 aa18.6■□□□□ 0.57
SHCBP1-201ENST00000303383 MTHFSDQ2M296 383 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-201ENST00000303383 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
SHCBP1-201ENST00000303383 DAXXQ9UER7 740 aaPredicted RBP18.59■□□□□ 0.57
SHCBP1-201ENST00000303383 USP54Q70EL1 1684 aa18.59■□□□□ 0.57
SHCBP1-201ENST00000303383 IPO8O15397 1037 aaKnown RBP18.59■□□□□ 0.57
SHCBP1-201ENST00000303383 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
SHCBP1-201ENST00000303383 KDRP35968 1356 aa18.58■□□□□ 0.56
SHCBP1-201ENST00000303383 DLG5Q8TDM6 1919 aa18.58■□□□□ 0.56
SHCBP1-201ENST00000303383 ZC3H6P61129 1189 aaKnown RBP18.58■□□□□ 0.56
SHCBP1-201ENST00000303383 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 MARF1Q9Y4F3 1742 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 LTN1O94822 1766 aa18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 TWISTNBQ3B726 338 aaPredicted RBP18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 ARHGEF25Q86VW2 580 aa18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 DZIP1LQ8IYY4 767 aaKnown RBP18.57■□□□□ 0.56
SHCBP1-201ENST00000303383 RGPD1P0DJD0 1748 aa18.56■□□□□ 0.56
SHCBP1-201ENST00000303383 HAP1P54257 671 aaPredicted RBP18.56■□□□□ 0.56
SHCBP1-201ENST00000303383 ALDH1L2Q3SY69 923 aa18.56■□□□□ 0.56
SHCBP1-201ENST00000303383 ZNF853P0CG23 659 aa18.55■□□□□ 0.56
SHCBP1-201ENST00000303383 STRCQ7RTU9 1775 aa18.55■□□□□ 0.56
SHCBP1-201ENST00000303383 NFAT5O94916 1531 aa18.55■□□□□ 0.56
SHCBP1-201ENST00000303383 NOB1Q9ULX3 412 aaKnown RBP18.55■□□□□ 0.56
SHCBP1-201ENST00000303383 USP19O94966 1318 aa18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 GNAT3A8MTJ3 354 aa18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 NBPF6Q5VWK0 638 aa18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 CENPQQ7L2Z9 268 aaPredicted RBP18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 ANKRD24Q8TF21 1146 aa18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 NBPF4Q96M43 638 aa18.54■□□□□ 0.56
SHCBP1-201ENST00000303383 ATF7IPQ6VMQ6 1270 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 240 ms