RNA–Protein interactions for RNA: ENST00000302177.2

FOXA3-201, Transcript of forkhead box A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA3, Length 1,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3-201ENST00000302177 KNDC1Q76NI1 1749 aa30.42■■■□□ 2.46
FOXA3-201ENST00000302177 PIK3R4Q99570 1358 aa30.4■■■□□ 2.46
FOXA3-201ENST00000302177 VAMP4O75379 141 aa30.39■■■□□ 2.46
FOXA3-201ENST00000302177 ZNF853P0CG23 659 aa30.39■■■□□ 2.46
FOXA3-201ENST00000302177 LMOD3Q0VAK6 560 aa30.39■■■□□ 2.46
FOXA3-201ENST00000302177 CCDC61Q9Y6R9 512 aa30.39■■■□□ 2.46
FOXA3-201ENST00000302177 PHACTR3Q96KR7 559 aa30.39■■■□□ 2.46
FOXA3-201ENST00000302177 HSPA2P54652 639 aa30.38■■■□□ 2.45
FOXA3-201ENST00000302177 ZNF692Q9BU19 519 aaPredicted RBP30.38■■■□□ 2.45
FOXA3-201ENST00000302177 ANTXR1Q9H6X2 564 aa30.38■■■□□ 2.45
FOXA3-201ENST00000302177 METP08581 1390 aa30.38■■■□□ 2.45
FOXA3-201ENST00000302177 NUCB1Q02818 461 aa30.37■■■□□ 2.45
FOXA3-201ENST00000302177 NUDT16Q96DE0 195 aaKnown RBP30.37■■■□□ 2.45
FOXA3-201ENST00000302177 PTCH1Q13635 1447 aa30.37■■■□□ 2.45
FOXA3-201ENST00000302177 MON2Q7Z3U7 1717 aa30.36■■■□□ 2.45
FOXA3-201ENST00000302177 MRPL50Q8N5N7 158 aaKnown RBP30.36■■■□□ 2.45
FOXA3-201ENST00000302177 TBC1D2Q9BYX2 928 aa30.36■■■□□ 2.45
FOXA3-201ENST00000302177 COG3Q96JB2 828 aa30.35■■■□□ 2.45
FOXA3-201ENST00000302177 EMILIN1Q9Y6C2 1016 aa30.35■■■□□ 2.45
FOXA3-201ENST00000302177 NME9Q86XW9 330 aa30.35■■■□□ 2.45
FOXA3-201ENST00000302177 LMTK3Q96Q04 1460 aa30.35■■■□□ 2.45
FOXA3-201ENST00000302177 HMOX1P09601 288 aa30.34■■■□□ 2.45
FOXA3-201ENST00000302177 FBLN1P23142 703 aa30.34■■■□□ 2.45
FOXA3-201ENST00000302177 C22orf23Q9BZE7 217 aa30.34■■■□□ 2.45
FOXA3-201ENST00000302177 CPS1P31327 1500 aa30.34■■■□□ 2.45
FOXA3-201ENST00000302177 ZBTB7BO15156 539 aaPredicted RBP30.33■■■□□ 2.45
FOXA3-201ENST00000302177 GCC1Q96CN9 775 aa30.32■■■□□ 2.44
FOXA3-201ENST00000302177 CFAP44Q96MT7 982 aa30.32■■■□□ 2.44
FOXA3-201ENST00000302177 SETD1BQ9UPS6 1966 aaKnown RBP30.32■■■□□ 2.44
FOXA3-201ENST00000302177 TXNDC2Q86VQ3 553 aa30.3■■■□□ 2.44
FOXA3-201ENST00000302177 AKAP12Q02952 1782 aa30.3■■■□□ 2.44
FOXA3-201ENST00000302177 CHD1LQ86WJ1 897 aa30.29■■■□□ 2.44
FOXA3-201ENST00000302177 TNRQ92752 1358 aa30.29■■■□□ 2.44
FOXA3-201ENST00000302177 MBIPQ9NS73 344 aa30.28■■■□□ 2.44
FOXA3-201ENST00000302177 ABCC4O15439 1325 aa30.27■■■□□ 2.44
FOXA3-201ENST00000302177 KIF24Q5T7B8 1368 aa30.27■■■□□ 2.44
FOXA3-201ENST00000302177 SLKQ9H2G2 1235 aaPredicted RBP30.26■■■□□ 2.43
FOXA3-201ENST00000302177 MFAP1P55081 439 aaKnown RBP30.24■■■□□ 2.43
FOXA3-201ENST00000302177 TSPYL6Q8N831 410 aa30.24■■■□□ 2.43
FOXA3-201ENST00000302177 API5Q9BZZ5 524 aaKnown RBP30.24■■■□□ 2.43
FOXA3-201ENST00000302177 ITSN1Q15811 1721 aa30.24■■■□□ 2.43
FOXA3-201ENST00000302177 TWISTNBQ3B726 338 aaPredicted RBP30.24■■■□□ 2.43
FOXA3-201ENST00000302177 THUMPD2Q9BTF0 503 aaKnown RBP30.24■■■□□ 2.43
FOXA3-201ENST00000302177 ZRANB1Q9UGI0 708 aa30.24■■■□□ 2.43
FOXA3-201ENST00000302177 BMP2KLQ5H9B9 411 aa30.23■■■□□ 2.43
FOXA3-201ENST00000302177 RBM25P49756 843 aaKnown RBP30.23■■■□□ 2.43
FOXA3-201ENST00000302177 HAP1P54257 671 aaPredicted RBP30.22■■■□□ 2.43
FOXA3-201ENST00000302177 TMEM2Q9UHN6 1383 aa30.21■■■□□ 2.43
FOXA3-201ENST00000302177 NRKQ7Z2Y5 1582 aa30.21■■■□□ 2.43
FOXA3-201ENST00000302177 LNPKQ9C0E8 428 aa30.19■■■□□ 2.42
FOXA3-201ENST00000302177 DLG5Q8TDM6 1919 aa30.19■■■□□ 2.42
FOXA3-201ENST00000302177 RRS1Q15050 365 aaKnown RBP30.18■■■□□ 2.42
FOXA3-201ENST00000302177 PRR36Q9H6K5 1346 aa30.18■■■□□ 2.42
FOXA3-201ENST00000302177 IL27Q8NEV9 243 aa30.17■■■□□ 2.42
FOXA3-201ENST00000302177 PLEKHG3A1L390 1219 aa30.16■■■□□ 2.42
FOXA3-201ENST00000302177 C8orf58Q8NAV2 365 aa30.16■■■□□ 2.42
FOXA3-201ENST00000302177 CHMP5Q9NZZ3 219 aa30.16■■■□□ 2.42
FOXA3-201ENST00000302177 SNX21Q969T3 373 aa30.15■■■□□ 2.42
FOXA3-201ENST00000302177 NCKAP5LQ9HCH0 1330 aa30.15■■■□□ 2.42
FOXA3-201ENST00000302177 ANKRD45Q5TZF3 282 aa30.15■■■□□ 2.42
FOXA3-201ENST00000302177 UBR1Q8IWV7 1749 aa30.14■■■□□ 2.42
FOXA3-201ENST00000302177 TTC21BQ7Z4L5 1316 aa30.13■■■□□ 2.41
FOXA3-201ENST00000302177 ROBO2Q9HCK4 1378 aa30.13■■■□□ 2.41
FOXA3-201ENST00000302177 ADAMTS13Q76LX8 1427 aa30.13■■■□□ 2.41
FOXA3-201ENST00000302177 CEP170BQ9Y4F5 1589 aaPredicted RBP30.13■■■□□ 2.41
FOXA3-201ENST00000302177 EIF5BO60841 1220 aaKnown RBP30.13■■■□□ 2.41
FOXA3-201ENST00000302177 HSCBQ8IWL3 235 aa30.12■■■□□ 2.41
FOXA3-201ENST00000302177 ELL2O00472 640 aaPredicted RBP30.12■■■□□ 2.41
FOXA3-201ENST00000302177 OVOS2A0A0J9YW53 1432 aa30.11■■■□□ 2.41
FOXA3-201ENST00000302177 OVOS2Q6IE36 1432 aa30.11■■■□□ 2.41
FOXA3-201ENST00000302177 SIRT2Q8IXJ6 389 aa30.11■■■□□ 2.41
FOXA3-201ENST00000302177 TOPAZ1Q8N9V7 1692 aa30.11■■■□□ 2.41
FOXA3-201ENST00000302177 PLEKHG1Q9ULL1 1385 aa30.1■■■□□ 2.41
FOXA3-201ENST00000302177 EIF4A2Q14240 407 aaKnown RBP30.1■■■□□ 2.41
FOXA3-201ENST00000302177 KIAA0232Q92628 1395 aa30.1■■■□□ 2.41
FOXA3-201ENST00000302177 INTS3Q68E01 1043 aaKnown RBP30.09■■■□□ 2.41
FOXA3-201ENST00000302177 NCOA3Q9Y6Q9 1424 aa30.08■■■□□ 2.41
FOXA3-201ENST00000302177 USP31Q70CQ4 1352 aa30.08■■■□□ 2.41
FOXA3-201ENST00000302177 FAM83GA6ND36 823 aa30.08■■■□□ 2.41
FOXA3-201ENST00000302177 CHL1O00533 1208 aa30.08■■■□□ 2.41
FOXA3-201ENST00000302177 ACEP12821 1306 aa30.07■■■□□ 2.4
FOXA3-201ENST00000302177 BRPF3Q9ULD4 1205 aa30.06■■■□□ 2.4
FOXA3-201ENST00000302177 USP6P35125 1406 aa30.06■■■□□ 2.4
FOXA3-201ENST00000302177 MCM4P33991 863 aa30.06■■■□□ 2.4
FOXA3-201ENST00000302177 SULT6B1Q6IMI4 303 aa30.06■■■□□ 2.4
FOXA3-201ENST00000302177 C1orf115Q9H7X2 142 aa30.06■■■□□ 2.4
FOXA3-201ENST00000302177 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.06■■■□□ 2.4
FOXA3-201ENST00000302177 ZNF142P52746 1687 aaPredicted RBP30.05■■■□□ 2.4
FOXA3-201ENST00000302177 NALCNQ8IZF0 1738 aa30.05■■■□□ 2.4
FOXA3-201ENST00000302177 THEMISQ8N1K5 641 aaPredicted RBP30.04■■■□□ 2.4
FOXA3-201ENST00000302177 DCTPP1Q9H773 170 aa30.04■■■□□ 2.4
FOXA3-201ENST00000302177 DCTN1Q14203 1278 aa30.03■■■□□ 2.4
FOXA3-201ENST00000302177 DDIT3P35638 169 aa30.02■■■□□ 2.4
FOXA3-201ENST00000302177 L1TD1Q5T7N2 865 aaKnown RBP30.02■■■□□ 2.4
FOXA3-201ENST00000302177 SSH2Q76I76 1423 aa30.02■■■□□ 2.4
FOXA3-201ENST00000302177 RGPD1P0DJD0 1748 aa30.02■■■□□ 2.4
FOXA3-201ENST00000302177 PTPRCP08575 1304 aa30.01■■■□□ 2.39
FOXA3-201ENST00000302177 AEBP1Q8IUX7 1158 aa30.01■■■□□ 2.39
FOXA3-201ENST00000302177 RPAP2Q8IXW5 612 aaPredicted RBP30.01■■■□□ 2.39
FOXA3-201ENST00000302177 CIZ1Q9ULV3 898 aaPredicted RBP30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms