RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 PHF8Q9UPP1 1060 aa11.6□□□□□ -0.55
TUBA1A-202ENST00000301071 KIF20BQ96Q89 1820 aa11.6□□□□□ -0.55
TUBA1A-202ENST00000301071 XRCC6P12956 609 aaKnown RBP eCLIP11.59□□□□□ -0.55
TUBA1A-202ENST00000301071 RGS3P49796 1198 aa11.59□□□□□ -0.55
TUBA1A-202ENST00000301071 NGEFQ8N5V2 710 aa11.59□□□□□ -0.55
TUBA1A-202ENST00000301071 CGNL1Q0VF96 1302 aa11.59□□□□□ -0.55
TUBA1A-202ENST00000301071 PTMSP20962 102 aa11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 GOLGA2Q08379 1002 aa11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 CERKQ8TCT0 537 aa11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 ANTXR1Q9H6X2 564 aa11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 KNSTRNQ9Y448 316 aa11.58□□□□□ -0.55
TUBA1A-202ENST00000301071 USP19O94966 1318 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 USP6P35125 1406 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 C20orf194Q5TEA3 1177 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 DUSP27Q5VZP5 1158 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 SKAP1Q86WV1 359 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 PDCL3Q9H2J4 239 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 SLAIN2Q9P270 581 aa11.58□□□□□ -0.56
TUBA1A-202ENST00000301071 ANKRD26Q9UPS8 1709 aa11.57□□□□□ -0.56
TUBA1A-202ENST00000301071 ILDR2Q71H61 639 aa11.57□□□□□ -0.56
TUBA1A-202ENST00000301071 EDC4Q6P2E9 1401 aaKnown RBP11.57□□□□□ -0.56
TUBA1A-202ENST00000301071 DDX11L8A8MPP1 907 aa11.56□□□□□ -0.56
TUBA1A-202ENST00000301071 MYH16Q9H6N6 1097 aa11.56□□□□□ -0.56
TUBA1A-202ENST00000301071 SSH2Q76I76 1423 aa11.56□□□□□ -0.56
TUBA1A-202ENST00000301071 MCM4P33991 863 aa11.56□□□□□ -0.56
TUBA1A-202ENST00000301071 CC2D1BQ5T0F9 858 aaKnown RBP11.56□□□□□ -0.56
TUBA1A-202ENST00000301071 IQSEC2Q5JU85 1478 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 TRPM3Q9HCF6 1732 aaPredicted RBP11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 NPC1L1Q9UHC9 1359 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 ESPNB1AK53 854 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 FOXO3O43524 673 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 PDE3AQ14432 1141 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 WDR43Q15061 677 aaKnown RBP eCLIP11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 BRINP3Q76B58 766 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 CHMP5Q9NZZ3 219 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 ROBO1Q9Y6N7 1651 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
TUBA1A-202ENST00000301071 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 TRIM44Q96DX7 344 aaPredicted RBP11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 MAP7D2Q96T17 732 aa11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 TTC21BQ7Z4L5 1316 aa11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 NHSL1Q5SYE7 1610 aa11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 TERF1P54274 439 aa11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 DDX17Q92841 729 aaKnown RBP11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 PIK3C2AO00443 1686 aa11.54□□□□□ -0.56
TUBA1A-202ENST00000301071 FYB1O15117 783 aa11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 XPCQ01831 940 aaPredicted RBP11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 CALD1Q05682 793 aaKnown RBP11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 PSME1Q06323 249 aa11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 TBC1D32Q96NH3 1257 aa11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 MARF1Q9Y4F3 1742 aaKnown RBP11.53□□□□□ -0.56
TUBA1A-202ENST00000301071 SLFN5Q08AF3 891 aa11.52□□□□□ -0.56
TUBA1A-202ENST00000301071 NME9Q86XW9 330 aa11.52□□□□□ -0.56
TUBA1A-202ENST00000301071 TRMT2AQ8IZ69 625 aaKnown RBP11.52□□□□□ -0.56
TUBA1A-202ENST00000301071 GGNBP2Q9H3C7 697 aa11.52□□□□□ -0.56
TUBA1A-202ENST00000301071 PXDNQ92626 1479 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 TRAK2O60296 914 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 KRT28Q7Z3Y7 464 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 GRPEL1Q9HAV7 217 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 NSD2O96028 1365 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 USP54Q70EL1 1684 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 ALS2Q96Q42 1657 aa11.52□□□□□ -0.57
TUBA1A-202ENST00000301071 ZRANB1Q9UGI0 708 aa11.51□□□□□ -0.57
TUBA1A-202ENST00000301071 NPHP3Q7Z494 1330 aa11.51□□□□□ -0.57
TUBA1A-202ENST00000301071 TTC21AQ8NDW8 1320 aa11.51□□□□□ -0.57
TUBA1A-202ENST00000301071 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
TUBA1A-202ENST00000301071 TOM1O60784 492 aa11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 SKOR2Q2VWA4 1001 aaPredicted RBP11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 TAF7LQ5H9L4 462 aa11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 E9PSI1 815 aa11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 TBC1D2Q9BYX2 928 aa11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 ADAMTS8Q9UP79 889 aa11.5□□□□□ -0.57
TUBA1A-202ENST00000301071 UBAP1LF5GYI3 381 aa11.49□□□□□ -0.57
TUBA1A-202ENST00000301071 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
TUBA1A-202ENST00000301071 OVOS2A0A0J9YW53 1432 aa11.49□□□□□ -0.57
TUBA1A-202ENST00000301071 OVOS2Q6IE36 1432 aa11.49□□□□□ -0.57
TUBA1A-202ENST00000301071 AHDC1Q5TGY3 1603 aaPredicted RBP11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 MTERF4Q7Z6M4 381 aaKnown RBP11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 MORC1Q86VD1 984 aa11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 SBNO1A3KN83 1393 aa11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 USP31Q70CQ4 1352 aa11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 SOS2Q07890 1332 aaPredicted RBP11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 ABTB2Q8N961 1025 aa11.48□□□□□ -0.57
TUBA1A-202ENST00000301071 PIP4K2BP78356 416 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 NUTM2GQ5VZR2 741 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 ANP32BQ92688 251 aaKnown RBP11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 COG3Q96JB2 828 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 PHLPP1O60346 1717 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 SOCS7O14512 581 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 TNNT2P45379 298 aaPredicted RBP11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 CCDC173Q0VFZ6 552 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 PANK2Q9BZ23 570 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 TAOK2Q9UL54 1235 aa11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 CIZ1Q9ULV3 898 aaPredicted RBP11.47□□□□□ -0.57
TUBA1A-202ENST00000301071 TNS3Q68CZ2 1445 aa11.46□□□□□ -0.57
TUBA1A-202ENST00000301071 SPATA31A3Q5VYP0 1347 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms