RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 DZIP1LQ8IYY4 767 aaKnown RBP18.61■□□□□ 0.57
GDF9-201ENST00000296875 PANK1Q8TE04 598 aa18.61■□□□□ 0.57
GDF9-201ENST00000296875 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
GDF9-201ENST00000296875 XIRP1Q702N8 1843 aaKnown RBP18.61■□□□□ 0.57
GDF9-201ENST00000296875 RBM33Q96EV2 1170 aaKnown RBP18.6■□□□□ 0.57
GDF9-201ENST00000296875 SMC4Q9NTJ3 1288 aa18.6■□□□□ 0.57
GDF9-201ENST00000296875 DAXXQ9UER7 740 aaPredicted RBP18.6■□□□□ 0.57
GDF9-201ENST00000296875 LRRC7Q96NW7 1537 aa18.6■□□□□ 0.57
GDF9-201ENST00000296875 MVPQ14764 893 aaKnown RBP18.6■□□□□ 0.57
GDF9-201ENST00000296875 RSPH6AQ9H0K4 717 aa18.59■□□□□ 0.57
GDF9-201ENST00000296875 DDX19BQ9UMR2 479 aa18.59■□□□□ 0.57
GDF9-201ENST00000296875 NFE2L2Q16236 605 aa18.58■□□□□ 0.57
GDF9-201ENST00000296875 PPM1GO15355 546 aaPredicted RBP18.58■□□□□ 0.56
GDF9-201ENST00000296875 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
GDF9-201ENST00000296875 PRKAR2BP31323 418 aa18.57■□□□□ 0.56
GDF9-201ENST00000296875 EXOSC9Q06265 439 aaKnown RBP18.57■□□□□ 0.56
GDF9-201ENST00000296875 MAP2P11137 1827 aaKnown RBP18.57■□□□□ 0.56
GDF9-201ENST00000296875 RTL5Q5HYW3 569 aaPredicted RBP18.56■□□□□ 0.56
GDF9-201ENST00000296875 PROSER2Q86WR7 435 aaPredicted RBP18.56■□□□□ 0.56
GDF9-201ENST00000296875 ANKARQ7Z5J8 1434 aa18.55■□□□□ 0.56
GDF9-201ENST00000296875 BRPF1P55201 1214 aaPredicted RBP18.55■□□□□ 0.56
GDF9-201ENST00000296875 GNAI1P63096 354 aa18.55■□□□□ 0.56
GDF9-201ENST00000296875 RGS3P49796 1198 aa18.55■□□□□ 0.56
GDF9-201ENST00000296875 ATF7IPQ6VMQ6 1270 aa18.55■□□□□ 0.56
GDF9-201ENST00000296875 ZNF335Q9H4Z2 1342 aaPredicted RBP18.55■□□□□ 0.56
GDF9-201ENST00000296875 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
GDF9-201ENST00000296875 PLEKHG3A1L390 1219 aa18.54■□□□□ 0.56
GDF9-201ENST00000296875 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 IL13P35225 146 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 C8orf34Q49A92 452 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 NME9Q86XW9 330 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 TSR2Q969E8 191 aaKnown RBP18.53■□□□□ 0.56
GDF9-201ENST00000296875 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 TMEM94Q12767 1356 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 IGHDP01880 384 aa18.53■□□□□ 0.56
GDF9-201ENST00000296875 BCL2L13Q9BXK5 485 aa18.52■□□□□ 0.55
GDF9-201ENST00000296875 UPF2Q9HAU5 1272 aaKnown RBP18.52■□□□□ 0.55
GDF9-201ENST00000296875 USP35Q9P2H5 1018 aa18.52■□□□□ 0.55
GDF9-201ENST00000296875 VIRMAQ69YN4 1812 aaKnown RBP18.52■□□□□ 0.55
GDF9-201ENST00000296875 PAK3O75914 559 aaPredicted RBP18.51■□□□□ 0.55
GDF9-201ENST00000296875 TTC21AQ8NDW8 1320 aa18.51■□□□□ 0.55
GDF9-201ENST00000296875 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
GDF9-201ENST00000296875 SSH1Q8WYL5 1049 aa18.5■□□□□ 0.55
GDF9-201ENST00000296875 ARHGAP45Q92619 1136 aa18.5■□□□□ 0.55
GDF9-201ENST00000296875 RLBP1P12271 317 aa18.49■□□□□ 0.55
GDF9-201ENST00000296875 HDAC1Q13547 482 aaPredicted RBP18.49■□□□□ 0.55
GDF9-201ENST00000296875 C19orf44Q9H6X5 657 aa18.49■□□□□ 0.55
GDF9-201ENST00000296875 USP6P35125 1406 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 ACEP12821 1306 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 TRIM27P14373 513 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 EMILIN1Q9Y6C2 1016 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 DCCP43146 1447 aa18.48■□□□□ 0.55
GDF9-201ENST00000296875 ITPRIPQ8IWB1 547 aa18.47■□□□□ 0.55
GDF9-201ENST00000296875 SSH2Q76I76 1423 aa18.46■□□□□ 0.55
GDF9-201ENST00000296875 NOB1Q9ULX3 412 aaKnown RBP18.46■□□□□ 0.55
GDF9-201ENST00000296875 PCDHB15Q9Y5E8 787 aa18.46■□□□□ 0.55
GDF9-201ENST00000296875 OVOS2A0A0J9YW53 1432 aa18.46■□□□□ 0.55
GDF9-201ENST00000296875 OVOS2Q6IE36 1432 aa18.46■□□□□ 0.55
GDF9-201ENST00000296875 HMOX1P09601 288 aa18.45■□□□□ 0.54
GDF9-201ENST00000296875 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
GDF9-201ENST00000296875 CFAP44Q96MT7 982 aa18.45■□□□□ 0.54
GDF9-201ENST00000296875 USP31Q70CQ4 1352 aa18.44■□□□□ 0.54
GDF9-201ENST00000296875 MST1RQ04912 1400 aa18.43■□□□□ 0.54
GDF9-201ENST00000296875 C1orf167Q5SNV9 1468 aa18.43■□□□□ 0.54
GDF9-201ENST00000296875 ZNF853P0CG23 659 aa18.42■□□□□ 0.54
GDF9-201ENST00000296875 BECN1Q14457 450 aa18.42■□□□□ 0.54
GDF9-201ENST00000296875 SKAP1Q86WV1 359 aa18.42■□□□□ 0.54
GDF9-201ENST00000296875 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
GDF9-201ENST00000296875 PDZRN3Q9UPQ7 1066 aa18.42■□□□□ 0.54
GDF9-201ENST00000296875 PHACTR3Q96KR7 559 aa18.41■□□□□ 0.54
GDF9-201ENST00000296875 API5Q9BZZ5 524 aaKnown RBP18.41■□□□□ 0.54
GDF9-201ENST00000296875 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
GDF9-201ENST00000296875 PHF8Q9UPP1 1060 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 ARHGEF10O15013 1369 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 MSH6P52701 1360 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 EIF5BO60841 1220 aaKnown RBP18.4■□□□□ 0.54
GDF9-201ENST00000296875 NBR1Q14596 966 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 ORAI2Q96SN7 254 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
GDF9-201ENST00000296875 VAMP4O75379 141 aa18.39■□□□□ 0.53
GDF9-201ENST00000296875 TMEM57Q8N5G2 664 aa18.39■□□□□ 0.53
GDF9-201ENST00000296875 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
GDF9-201ENST00000296875 TWISTNBQ3B726 338 aaPredicted RBP18.38■□□□□ 0.53
GDF9-201ENST00000296875 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
GDF9-201ENST00000296875 MARF1Q9Y4F3 1742 aaKnown RBP18.38■□□□□ 0.53
GDF9-201ENST00000296875 ATF3P18847 181 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 EIF4A2Q14240 407 aaKnown RBP18.37■□□□□ 0.53
GDF9-201ENST00000296875 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 CADPS2Q86UW7 1296 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 MBIPQ9NS73 344 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 ZRANB1Q9UGI0 708 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 TNNQ9UQP3 1299 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 PIK3C2AO00443 1686 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 SBNO1A3KN83 1393 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 FLT4P35916 1363 aa18.37■□□□□ 0.53
GDF9-201ENST00000296875 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
GDF9-201ENST00000296875 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms