RNA–Protein interactions for RNA: ENST00000294161.10

TTC9C-201, Transcript of tetratricopeptide repeat domain 9C, humanhuman

TSL 1 (best)

Gene TTC9C, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9C-201ENST00000294161 LMOD3Q0VAK6 560 aa18.95■□□□□ 0.62
TTC9C-201ENST00000294161 ZNF428Q96B54 188 aa18.95■□□□□ 0.62
TTC9C-201ENST00000294161 C19orf44Q9H6X5 657 aa18.94■□□□□ 0.62
TTC9C-201ENST00000294161 ZBTB47Q9UFB7 747 aaPredicted RBP18.94■□□□□ 0.62
TTC9C-201ENST00000294161 IL13P35225 146 aa18.93■□□□□ 0.62
TTC9C-201ENST00000294161 NFE2L2Q16236 605 aa18.93■□□□□ 0.62
TTC9C-201ENST00000294161 MSH6P52701 1360 aa18.93■□□□□ 0.62
TTC9C-201ENST00000294161 EXOSC9Q06265 439 aaKnown RBP18.93■□□□□ 0.62
TTC9C-201ENST00000294161 IPO8O15397 1037 aaKnown RBP18.92■□□□□ 0.62
TTC9C-201ENST00000294161 SMC4Q9NTJ3 1288 aa18.92■□□□□ 0.62
TTC9C-201ENST00000294161 TOPAZ1Q8N9V7 1692 aa18.92■□□□□ 0.62
TTC9C-201ENST00000294161 FAM161AQ3B820 660 aa18.91■□□□□ 0.62
TTC9C-201ENST00000294161 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
TTC9C-201ENST00000294161 DZIP1LQ8IYY4 767 aaKnown RBP18.91■□□□□ 0.62
TTC9C-201ENST00000294161 TSR2Q969E8 191 aaKnown RBP18.91■□□□□ 0.62
TTC9C-201ENST00000294161 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
TTC9C-201ENST00000294161 ATF3P18847 181 aa18.9■□□□□ 0.62
TTC9C-201ENST00000294161 TTC21BQ7Z4L5 1316 aa18.9■□□□□ 0.62
TTC9C-201ENST00000294161 ALDH1L2Q3SY69 923 aa18.9■□□□□ 0.62
TTC9C-201ENST00000294161 DDRGK1Q96HY6 314 aa18.9■□□□□ 0.62
TTC9C-201ENST00000294161 KIF16BQ96L93 1317 aa18.9■□□□□ 0.62
TTC9C-201ENST00000294161 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
TTC9C-201ENST00000294161 ORAI2Q96SN7 254 aa18.89■□□□□ 0.61
TTC9C-201ENST00000294161 RWDD1Q9H446 243 aaPredicted RBP18.89■□□□□ 0.61
TTC9C-201ENST00000294161 ACEP12821 1306 aa18.89■□□□□ 0.61
TTC9C-201ENST00000294161 MST1RQ04912 1400 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 TTC21AQ8NDW8 1320 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 BCL2L13Q9BXK5 485 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 NCOA3Q9Y6Q9 1424 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 USP6P35125 1406 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 GNAI1P63096 354 aa18.88■□□□□ 0.61
TTC9C-201ENST00000294161 NRKQ7Z2Y5 1582 aa18.87■□□□□ 0.61
TTC9C-201ENST00000294161 C1orf167Q5SNV9 1468 aa18.87■□□□□ 0.61
TTC9C-201ENST00000294161 ESCO1Q5FWF5 840 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 NPM2Q86SE8 214 aaKnown RBP18.86■□□□□ 0.61
TTC9C-201ENST00000294161 IFT57Q9NWB7 429 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 IGHDP01880 384 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 HMOX1P09601 288 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 DDX17Q92841 729 aaKnown RBP18.86■□□□□ 0.61
TTC9C-201ENST00000294161 DDX19BQ9UMR2 479 aa18.86■□□□□ 0.61
TTC9C-201ENST00000294161 FBLN1P23142 703 aa18.85■□□□□ 0.61
TTC9C-201ENST00000294161 ATF7IPQ6VMQ6 1270 aa18.85■□□□□ 0.61
TTC9C-201ENST00000294161 CADPS2Q86UW7 1296 aa18.85■□□□□ 0.61
TTC9C-201ENST00000294161 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
TTC9C-201ENST00000294161 CHMP4BQ9H444 224 aaKnown RBP18.85■□□□□ 0.61
TTC9C-201ENST00000294161 DCCP43146 1447 aa18.85■□□□□ 0.61
TTC9C-201ENST00000294161 RLBP1P12271 317 aa18.84■□□□□ 0.61
TTC9C-201ENST00000294161 BRPF1P55201 1214 aaPredicted RBP18.84■□□□□ 0.61
TTC9C-201ENST00000294161 OVOS2A0A0J9YW53 1432 aa18.84■□□□□ 0.61
TTC9C-201ENST00000294161 OVOS2Q6IE36 1432 aa18.84■□□□□ 0.61
TTC9C-201ENST00000294161 RGS3P49796 1198 aa18.84■□□□□ 0.61
TTC9C-201ENST00000294161 RRS1Q15050 365 aaKnown RBP18.84■□□□□ 0.61
TTC9C-201ENST00000294161 ANKARQ7Z5J8 1434 aa18.83■□□□□ 0.61
TTC9C-201ENST00000294161 USP31Q70CQ4 1352 aa18.83■□□□□ 0.6
TTC9C-201ENST00000294161 XPCQ01831 940 aaPredicted RBP18.82■□□□□ 0.6
TTC9C-201ENST00000294161 PHACTR3Q96KR7 559 aa18.82■□□□□ 0.6
TTC9C-201ENST00000294161 SLAIN2Q9P270 581 aa18.82■□□□□ 0.6
TTC9C-201ENST00000294161 CERKQ8TCT0 537 aa18.81■□□□□ 0.6
TTC9C-201ENST00000294161 PHF8Q9UPP1 1060 aa18.81■□□□□ 0.6
TTC9C-201ENST00000294161 HAP1P54257 671 aaPredicted RBP18.81■□□□□ 0.6
TTC9C-201ENST00000294161 SKAP1Q86WV1 359 aa18.81■□□□□ 0.6
TTC9C-201ENST00000294161 NOB1Q9ULX3 412 aaKnown RBP18.81■□□□□ 0.6
TTC9C-201ENST00000294161 SSH2Q76I76 1423 aa18.8■□□□□ 0.6
TTC9C-201ENST00000294161 TRIM27P14373 513 aa18.8■□□□□ 0.6
TTC9C-201ENST00000294161 LAS1LQ9Y4W2 734 aaKnown RBP18.8■□□□□ 0.6
TTC9C-201ENST00000294161 NGDNQ8NEJ9 315 aaKnown RBP18.79■□□□□ 0.6
TTC9C-201ENST00000294161 PCDHB15Q9Y5E8 787 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 FOXO3O43524 673 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 ARHGAP45Q92619 1136 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 CFAP44Q96MT7 982 aa18.79■□□□□ 0.6
TTC9C-201ENST00000294161 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
TTC9C-201ENST00000294161 EIF4A2Q14240 407 aaKnown RBP18.78■□□□□ 0.6
TTC9C-201ENST00000294161 BRINP3Q76B58 766 aa18.78■□□□□ 0.6
TTC9C-201ENST00000294161 ITPRIPQ8IWB1 547 aa18.78■□□□□ 0.6
TTC9C-201ENST00000294161 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
TTC9C-201ENST00000294161 UBAP1LF5GYI3 381 aa18.77■□□□□ 0.6
TTC9C-201ENST00000294161 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.59
TTC9C-201ENST00000294161 PAK3O75914 559 aaPredicted RBP18.76■□□□□ 0.59
TTC9C-201ENST00000294161 ROBO1Q9Y6N7 1651 aa18.76■□□□□ 0.59
TTC9C-201ENST00000294161 DAXXQ9UER7 740 aaPredicted RBP18.75■□□□□ 0.59
TTC9C-201ENST00000294161 VAMP4O75379 141 aa18.74■□□□□ 0.59
TTC9C-201ENST00000294161 SULT6B1Q6IMI4 303 aa18.74■□□□□ 0.59
TTC9C-201ENST00000294161 SBNO1A3KN83 1393 aa18.74■□□□□ 0.59
TTC9C-201ENST00000294161 ARHGEF10O15013 1369 aa18.74■□□□□ 0.59
TTC9C-201ENST00000294161 KIF1AQ12756 1690 aa18.74■□□□□ 0.59
TTC9C-201ENST00000294161 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
TTC9C-201ENST00000294161 MBIPQ9NS73 344 aa18.73■□□□□ 0.59
TTC9C-201ENST00000294161 PDZRN3Q9UPQ7 1066 aa18.73■□□□□ 0.59
TTC9C-201ENST00000294161 FLT4P35916 1363 aa18.73■□□□□ 0.59
TTC9C-201ENST00000294161 KIF24Q5T7B8 1368 aa18.73■□□□□ 0.59
TTC9C-201ENST00000294161 PSME1Q06323 249 aa18.72■□□□□ 0.59
TTC9C-201ENST00000294161 TWISTNBQ3B726 338 aaPredicted RBP18.72■□□□□ 0.59
TTC9C-201ENST00000294161 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
TTC9C-201ENST00000294161 MRPL50Q8N5N7 158 aaKnown RBP18.72■□□□□ 0.59
TTC9C-201ENST00000294161 DLG5Q8TDM6 1919 aa18.71■□□□□ 0.59
TTC9C-201ENST00000294161 NUTM2GQ5VZR2 741 aa18.71■□□□□ 0.59
TTC9C-201ENST00000294161 THUMPD2Q9BTF0 503 aaKnown RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms