RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 TRIM27P14373 513 aa19.23■□□□□ 0.67
CCDC116-201ENST00000292779 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
CCDC116-201ENST00000292779 SEC24BO95487 1268 aa19.23■□□□□ 0.67
CCDC116-201ENST00000292779 NME9Q86XW9 330 aa19.23■□□□□ 0.67
CCDC116-201ENST00000292779 NUDT16Q96DE0 195 aaKnown RBP19.23■□□□□ 0.67
CCDC116-201ENST00000292779 RSPH6AQ9H0K4 717 aa19.23■□□□□ 0.67
CCDC116-201ENST00000292779 PRKAR2BP31323 418 aa19.22■□□□□ 0.67
CCDC116-201ENST00000292779 EMILIN1Q9Y6C2 1016 aa19.22■□□□□ 0.67
CCDC116-201ENST00000292779 NUTM2FA1L443 756 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 ATF7IPQ6VMQ6 1270 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 NOB1Q9ULX3 412 aaKnown RBP19.21■□□□□ 0.67
CCDC116-201ENST00000292779 STRCQ7RTU9 1775 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 PRR36Q9H6K5 1346 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 CCDC61Q9Y6R9 512 aa19.21■□□□□ 0.67
CCDC116-201ENST00000292779 RGPD8O14715 1765 aaPredicted RBP19.2■□□□□ 0.66
CCDC116-201ENST00000292779 PTCH1Q13635 1447 aa19.2■□□□□ 0.66
CCDC116-201ENST00000292779 STRCP1A6NGW2 1772 aa19.19■□□□□ 0.66
CCDC116-201ENST00000292779 ITPRIPQ8IWB1 547 aa19.19■□□□□ 0.66
CCDC116-201ENST00000292779 HMOX1P09601 288 aa19.18■□□□□ 0.66
CCDC116-201ENST00000292779 DDX19BQ9UMR2 479 aa19.18■□□□□ 0.66
CCDC116-201ENST00000292779 PHACTR3Q96KR7 559 aa19.18■□□□□ 0.66
CCDC116-201ENST00000292779 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
CCDC116-201ENST00000292779 MON2Q7Z3U7 1717 aa19.17■□□□□ 0.66
CCDC116-201ENST00000292779 NALCNQ8IZF0 1738 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 KIF16BQ96L93 1317 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 IL13P35225 146 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 NFKBIBQ15653 356 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 NFE2L2Q16236 605 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 TMEM57Q8N5G2 664 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 COG3Q96JB2 828 aa19.16■□□□□ 0.66
CCDC116-201ENST00000292779 CDK12Q9NYV4 1490 aaPredicted RBP19.15■□□□□ 0.66
CCDC116-201ENST00000292779 AATKQ6ZMQ8 1374 aa19.15■□□□□ 0.66
CCDC116-201ENST00000292779 HDAC1Q13547 482 aaPredicted RBP19.14■□□□□ 0.66
CCDC116-201ENST00000292779 RRS1Q15050 365 aaKnown RBP19.14■□□□□ 0.66
CCDC116-201ENST00000292779 ALDH1L2Q3SY69 923 aa19.14■□□□□ 0.66
CCDC116-201ENST00000292779 AKAP12Q02952 1782 aa19.14■□□□□ 0.65
CCDC116-201ENST00000292779 IPO8O15397 1037 aaKnown RBP19.14■□□□□ 0.65
CCDC116-201ENST00000292779 ITSN1Q15811 1721 aa19.14■□□□□ 0.65
CCDC116-201ENST00000292779 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
CCDC116-201ENST00000292779 DLG5Q8TDM6 1919 aa19.12■□□□□ 0.65
CCDC116-201ENST00000292779 ZNF692Q9BU19 519 aaPredicted RBP19.12■□□□□ 0.65
CCDC116-201ENST00000292779 ZBTB40Q9NUA8 1239 aa19.12■□□□□ 0.65
CCDC116-201ENST00000292779 TOPAZ1Q8N9V7 1692 aa19.12■□□□□ 0.65
CCDC116-201ENST00000292779 NWD1Q149M9 1564 aa19.1■□□□□ 0.65
CCDC116-201ENST00000292779 ZNF428Q96B54 188 aa19.09■□□□□ 0.65
CCDC116-201ENST00000292779 UPF2Q9HAU5 1272 aaKnown RBP19.09■□□□□ 0.65
CCDC116-201ENST00000292779 CALD1Q05682 793 aaKnown RBP19.09■□□□□ 0.65
CCDC116-201ENST00000292779 VAMP4O75379 141 aa19.08■□□□□ 0.64
CCDC116-201ENST00000292779 BRPF1P55201 1214 aaPredicted RBP19.08■□□□□ 0.64
CCDC116-201ENST00000292779 SMC5Q8IY18 1101 aa19.08■□□□□ 0.64
CCDC116-201ENST00000292779 TBC1D32Q96NH3 1257 aa19.08■□□□□ 0.64
CCDC116-201ENST00000292779 FMN2Q9NZ56 1722 aa19.08■□□□□ 0.64
CCDC116-201ENST00000292779 GNAI1P63096 354 aa19.07■□□□□ 0.64
CCDC116-201ENST00000292779 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
CCDC116-201ENST00000292779 IFT57Q9NWB7 429 aa19.07■□□□□ 0.64
CCDC116-201ENST00000292779 ZNF853P0CG23 659 aa19.06■□□□□ 0.64
CCDC116-201ENST00000292779 BECN1Q14457 450 aa19.06■□□□□ 0.64
CCDC116-201ENST00000292779 MBIPQ9NS73 344 aa19.06■□□□□ 0.64
CCDC116-201ENST00000292779 ACEP12821 1306 aa19.06■□□□□ 0.64
CCDC116-201ENST00000292779 MRPL50Q8N5N7 158 aaKnown RBP19.05■□□□□ 0.64
CCDC116-201ENST00000292779 TTC21BQ7Z4L5 1316 aa19.05■□□□□ 0.64
CCDC116-201ENST00000292779 ELL2O00472 640 aaPredicted RBP19.04■□□□□ 0.64
CCDC116-201ENST00000292779 PROSER2Q86WR7 435 aaPredicted RBP19.03■□□□□ 0.64
CCDC116-201ENST00000292779 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
CCDC116-201ENST00000292779 FRAT2O75474 233 aaPredicted RBP19.03■□□□□ 0.64
CCDC116-201ENST00000292779 LMOD3Q0VAK6 560 aa19.03■□□□□ 0.64
CCDC116-201ENST00000292779 XIRP1Q702N8 1843 aaKnown RBP19.02■□□□□ 0.64
CCDC116-201ENST00000292779 NRKQ7Z2Y5 1582 aa19.02■□□□□ 0.64
CCDC116-201ENST00000292779 FAM83GA6ND36 823 aa19.02■□□□□ 0.64
CCDC116-201ENST00000292779 ARHGAP45Q92619 1136 aa19.02■□□□□ 0.64
CCDC116-201ENST00000292779 CFAP44Q96MT7 982 aa19.02■□□□□ 0.64
CCDC116-201ENST00000292779 ADGRL3Q9HAR2 1447 aa19.02■□□□□ 0.64
CCDC116-201ENST00000292779 ZBTB7BO15156 539 aaPredicted RBP19.01■□□□□ 0.63
CCDC116-201ENST00000292779 EIF4A2Q14240 407 aaKnown RBP19.01■□□□□ 0.63
CCDC116-201ENST00000292779 TWISTNBQ3B726 338 aaPredicted RBP19.01■□□□□ 0.63
CCDC116-201ENST00000292779 USP6P35125 1406 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 NUCB1Q02818 461 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 OVOS2A0A0J9YW53 1432 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 OVOS2Q6IE36 1432 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 ZNF335Q9H4Z2 1342 aaPredicted RBP19■□□□□ 0.63
CCDC116-201ENST00000292779 DCTN1Q14203 1278 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 GSE1Q14687 1217 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 AEBP1Q8IUX7 1158 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 C8orf58Q8NAV2 365 aa19■□□□□ 0.63
CCDC116-201ENST00000292779 SULT6B1Q6IMI4 303 aa18.98■□□□□ 0.63
CCDC116-201ENST00000292779 C14orf37Q86TY3 774 aa18.98■□□□□ 0.63
CCDC116-201ENST00000292779 TMEM94Q12767 1356 aa18.98■□□□□ 0.63
CCDC116-201ENST00000292779 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
CCDC116-201ENST00000292779 TBC1D2Q9BYX2 928 aa18.98■□□□□ 0.63
CCDC116-201ENST00000292779 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
CCDC116-201ENST00000292779 SLKQ9H2G2 1235 aaPredicted RBP18.98■□□□□ 0.63
CCDC116-201ENST00000292779 ABCC4O15439 1325 aa18.97■□□□□ 0.63
CCDC116-201ENST00000292779 C1orf115Q9H7X2 142 aa18.97■□□□□ 0.63
CCDC116-201ENST00000292779 HSP90AB2PQ58FF8 381 aa18.97■□□□□ 0.63
CCDC116-201ENST00000292779 CHD1LQ86WJ1 897 aa18.97■□□□□ 0.63
CCDC116-201ENST00000292779 C22orf23Q9BZE7 217 aa18.97■□□□□ 0.63
CCDC116-201ENST00000292779 CHMP4BQ9H444 224 aaKnown RBP18.97■□□□□ 0.63
CCDC116-201ENST00000292779 SOX12O15370 315 aa18.96■□□□□ 0.63
CCDC116-201ENST00000292779 PEAK1Q9H792 1746 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms