RNA–Protein interactions for RNA: ENST00000290178.4

PAXBP1-201, Transcript of PAX3 and PAX7 binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PAXBP1, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAXBP1-201ENST00000290178 GSE1Q14687 1217 aa27.45■■□□□ 1.98
PAXBP1-201ENST00000290178 MRPL50Q8N5N7 158 aaKnown RBP27.45■■□□□ 1.98
PAXBP1-201ENST00000290178 C1orf115Q9H7X2 142 aa27.44■■□□□ 1.98
PAXBP1-201ENST00000290178 MFAP1P55081 439 aaKnown RBP27.43■■□□□ 1.98
PAXBP1-201ENST00000290178 CDK12Q9NYV4 1490 aaPredicted RBP27.43■■□□□ 1.98
PAXBP1-201ENST00000290178 AATKQ6ZMQ8 1374 aa27.43■■□□□ 1.98
PAXBP1-201ENST00000290178 GNAI1P63096 354 aa27.43■■□□□ 1.98
PAXBP1-201ENST00000290178 ROBO2Q9HCK4 1378 aa27.42■■□□□ 1.98
PAXBP1-201ENST00000290178 ZNF853P0CG23 659 aa27.42■■□□□ 1.98
PAXBP1-201ENST00000290178 IFT57Q9NWB7 429 aa27.42■■□□□ 1.98
PAXBP1-201ENST00000290178 C8orf58Q8NAV2 365 aa27.42■■□□□ 1.98
PAXBP1-201ENST00000290178 LNPKQ9C0E8 428 aa27.42■■□□□ 1.98
PAXBP1-201ENST00000290178 TBC1D2Q9BYX2 928 aa27.41■■□□□ 1.98
PAXBP1-201ENST00000290178 TNRQ92752 1358 aa27.41■■□□□ 1.98
PAXBP1-201ENST00000290178 HDGFP51858 240 aaKnown RBP27.41■■□□□ 1.98
PAXBP1-201ENST00000290178 ZBTB7BO15156 539 aaPredicted RBP27.4■■□□□ 1.98
PAXBP1-201ENST00000290178 CALD1Q05682 793 aaKnown RBP27.4■■□□□ 1.98
PAXBP1-201ENST00000290178 AEBP1Q8IUX7 1158 aa27.4■■□□□ 1.98
PAXBP1-201ENST00000290178 BRPF1P55201 1214 aaPredicted RBP27.39■■□□□ 1.98
PAXBP1-201ENST00000290178 TWISTNBQ3B726 338 aaPredicted RBP27.39■■□□□ 1.97
PAXBP1-201ENST00000290178 SIRT1Q96EB6 747 aa27.39■■□□□ 1.97
PAXBP1-201ENST00000290178 NUCB1Q02818 461 aa27.38■■□□□ 1.97
PAXBP1-201ENST00000290178 ZNF428Q96B54 188 aa27.38■■□□□ 1.97
PAXBP1-201ENST00000290178 TECPR2O15040 1411 aa27.38■■□□□ 1.97
PAXBP1-201ENST00000290178 TMEM2Q9UHN6 1383 aa27.38■■□□□ 1.97
PAXBP1-201ENST00000290178 SPRYD3Q8NCJ5 442 aa27.38■■□□□ 1.97
PAXBP1-201ENST00000290178 LTKP29376 864 aa27.37■■□□□ 1.97
PAXBP1-201ENST00000290178 CFAP44Q96MT7 982 aa27.37■■□□□ 1.97
PAXBP1-201ENST00000290178 ZNF692Q9BU19 519 aaPredicted RBP27.37■■□□□ 1.97
PAXBP1-201ENST00000290178 C22orf23Q9BZE7 217 aa27.37■■□□□ 1.97
PAXBP1-201ENST00000290178 MON2Q7Z3U7 1717 aa27.36■■□□□ 1.97
PAXBP1-201ENST00000290178 SOX12O15370 315 aa27.35■■□□□ 1.97
PAXBP1-201ENST00000290178 IL27Q8NEV9 243 aa27.35■■□□□ 1.97
PAXBP1-201ENST00000290178 EIF4A2Q14240 407 aaKnown RBP27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 SULT6B1Q6IMI4 303 aa27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 CHD1LQ86WJ1 897 aa27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 ACEP12821 1306 aa27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 DLG5Q8TDM6 1919 aa27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 CEBPAP49715 358 aaPredicted RBP27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 ANTXR1Q9H6X2 564 aa27.34■■□□□ 1.97
PAXBP1-201ENST00000290178 SLC26A8Q96RN1 970 aa27.33■■□□□ 1.97
PAXBP1-201ENST00000290178 TTC21BQ7Z4L5 1316 aa27.33■■□□□ 1.97
PAXBP1-201ENST00000290178 C3P01024 1663 aa27.33■■□□□ 1.97
PAXBP1-201ENST00000290178 ARHGAP45Q92619 1136 aa27.33■■□□□ 1.97
PAXBP1-201ENST00000290178 ADAMTS13Q76LX8 1427 aa27.33■■□□□ 1.96
PAXBP1-201ENST00000290178 PLPPR3Q6T4P5 718 aa27.32■■□□□ 1.96
PAXBP1-201ENST00000290178 KNDC1Q76NI1 1749 aa27.32■■□□□ 1.96
PAXBP1-201ENST00000290178 KIF13AQ9H1H9 1805 aa27.32■■□□□ 1.96
PAXBP1-201ENST00000290178 ANKRD45Q5TZF3 282 aa27.32■■□□□ 1.96
PAXBP1-201ENST00000290178 LMOD3Q0VAK6 560 aa27.31■■□□□ 1.96
PAXBP1-201ENST00000290178 KRT24Q2M2I5 525 aa27.31■■□□□ 1.96
PAXBP1-201ENST00000290178 AKAP12Q02952 1782 aa27.31■■□□□ 1.96
PAXBP1-201ENST00000290178 PTCH1Q13635 1447 aa27.31■■□□□ 1.96
PAXBP1-201ENST00000290178 SIRT2Q8IXJ6 389 aa27.31■■□□□ 1.96
PAXBP1-201ENST00000290178 HSP90AB2PQ58FF8 381 aa27.3■■□□□ 1.96
PAXBP1-201ENST00000290178 ITSN1Q15811 1721 aa27.29■■□□□ 1.96
PAXBP1-201ENST00000290178 UBR1Q8IWV7 1749 aa27.29■■□□□ 1.96
PAXBP1-201ENST00000290178 ABCC4O15439 1325 aa27.29■■□□□ 1.96
PAXBP1-201ENST00000290178 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.28■■□□□ 1.96
PAXBP1-201ENST00000290178 MCM10Q7L590 875 aa27.28■■□□□ 1.96
PAXBP1-201ENST00000290178 PIK3R4Q99570 1358 aa27.28■■□□□ 1.96
PAXBP1-201ENST00000290178 BRPF3Q9ULD4 1205 aa27.23■■□□□ 1.95
PAXBP1-201ENST00000290178 PLEKHG3A1L390 1219 aa27.23■■□□□ 1.95
PAXBP1-201ENST00000290178 GCC1Q96CN9 775 aa27.22■■□□□ 1.95
PAXBP1-201ENST00000290178 PTPRUQ92729 1446 aa27.22■■□□□ 1.95
PAXBP1-201ENST00000290178 API5Q9BZZ5 524 aaKnown RBP27.21■■□□□ 1.95
PAXBP1-201ENST00000290178 RTN4Q9NQC3 1192 aaKnown RBP27.21■■□□□ 1.95
PAXBP1-201ENST00000290178 CHMP4BQ9H444 224 aaKnown RBP27.21■■□□□ 1.95
PAXBP1-201ENST00000290178 OVOS2A0A0J9YW53 1432 aa27.2■■□□□ 1.95
PAXBP1-201ENST00000290178 USP6P35125 1406 aa27.2■■□□□ 1.95
PAXBP1-201ENST00000290178 OVOS2Q6IE36 1432 aa27.2■■□□□ 1.95
PAXBP1-201ENST00000290178 PLEKHG1Q9ULL1 1385 aa27.19■■□□□ 1.94
PAXBP1-201ENST00000290178 MIS18AQ9NYP9 233 aa27.19■■□□□ 1.94
PAXBP1-201ENST00000290178 AMOTL2Q9Y2J4 779 aa27.18■■□□□ 1.94
PAXBP1-201ENST00000290178 BMP2KLQ5H9B9 411 aa27.18■■□□□ 1.94
PAXBP1-201ENST00000290178 FOXO3O43524 673 aa27.17■■□□□ 1.94
PAXBP1-201ENST00000290178 CHL1O00533 1208 aa27.17■■□□□ 1.94
PAXBP1-201ENST00000290178 NRKQ7Z2Y5 1582 aa27.17■■□□□ 1.94
PAXBP1-201ENST00000290178 PEAK1Q9H792 1746 aa27.17■■□□□ 1.94
PAXBP1-201ENST00000290178 MAP3K19Q56UN5 1328 aa27.14■■□□□ 1.94
PAXBP1-201ENST00000290178 EID1Q9Y6B2 187 aa27.13■■□□□ 1.93
PAXBP1-201ENST00000290178 TOPAZ1Q8N9V7 1692 aa27.13■■□□□ 1.93
PAXBP1-201ENST00000290178 RBM25P49756 843 aaKnown RBP27.13■■□□□ 1.93
PAXBP1-201ENST00000290178 TBC1D9Q6ZT07 1266 aa27.11■■□□□ 1.93
PAXBP1-201ENST00000290178 HSCBQ8IWL3 235 aa27.11■■□□□ 1.93
PAXBP1-201ENST00000290178 USP31Q70CQ4 1352 aa27.11■■□□□ 1.93
PAXBP1-201ENST00000290178 INTS3Q68E01 1043 aaKnown RBP27.1■■□□□ 1.93
PAXBP1-201ENST00000290178 NGDNQ8NEJ9 315 aaKnown RBP27.1■■□□□ 1.93
PAXBP1-201ENST00000290178 MTHFSDQ2M296 383 aaKnown RBP27.1■■□□□ 1.93
PAXBP1-201ENST00000290178 SSH2Q76I76 1423 aa27.1■■□□□ 1.93
PAXBP1-201ENST00000290178 C16orf71Q8IYS4 520 aaPredicted RBP27.09■■□□□ 1.93
PAXBP1-201ENST00000290178 RGS12O14924 1447 aa27.09■■□□□ 1.93
PAXBP1-201ENST00000290178 KIF2CQ99661 725 aa27.07■■□□□ 1.92
PAXBP1-201ENST00000290178 DCTPP1Q9H773 170 aa27.07■■□□□ 1.92
PAXBP1-201ENST00000290178 SLC4A2P04920 1241 aa27.06■■□□□ 1.92
PAXBP1-201ENST00000290178 GSPT1P15170 499 aaKnown RBP27.06■■□□□ 1.92
PAXBP1-201ENST00000290178 CRB1P82279 1406 aa27.06■■□□□ 1.92
PAXBP1-201ENST00000290178 NUTM2GQ5VZR2 741 aa27.06■■□□□ 1.92
PAXBP1-201ENST00000290178 CHMP5Q9NZZ3 219 aa27.06■■□□□ 1.92
PAXBP1-201ENST00000290178 APBB1O00213 710 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms