RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 USP54Q70EL1 1684 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 NEFMP07197 916 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 TRIM27P14373 513 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 FBLN1P23142 703 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 ATF7IPQ6VMQ6 1270 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 FMN2Q9NZ56 1722 aa9.28□□□□□ -0.92
SPARCL1-201ENST00000282470 USP31Q70CQ4 1352 aa9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 RGS3P49796 1198 aa9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 PHACTR3Q96KR7 559 aa9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 ZRANB1Q9UGI0 708 aa9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 FTSJ3Q8IY81 847 aaKnown RBP9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 RWDD1Q9H446 243 aaPredicted RBP9.27□□□□□ -0.93
SPARCL1-201ENST00000282470 PPM1GO15355 546 aaPredicted RBP9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 ZNF853P0CG23 659 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 DDX19BQ9UMR2 479 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 TBX22Q9Y458 520 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 EID1Q9Y6B2 187 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 TTC21BQ7Z4L5 1316 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 PIK3R4Q99570 1358 aa9.26□□□□□ -0.93
SPARCL1-201ENST00000282470 HDAC1Q13547 482 aaPredicted RBP9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 ACEP12821 1306 aa9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 IPO8O15397 1037 aaKnown RBP9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 HMOX1P09601 288 aa9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 LMOD3Q0VAK6 560 aa9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 NOB1Q9ULX3 412 aaKnown RBP9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 GNAI1P63096 354 aa9.25□□□□□ -0.93
SPARCL1-201ENST00000282470 RGPD8O14715 1765 aaPredicted RBP9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 PIK3C2AO00443 1686 aa9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 ANKARQ7Z5J8 1434 aa9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 CEP170BQ9Y4F5 1589 aaPredicted RBP9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 MARF1Q9Y4F3 1742 aaKnown RBP9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 CEBPAP49715 358 aaPredicted RBP9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 RRS1Q15050 365 aaKnown RBP9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 ARHGAP45Q92619 1136 aa9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 TTC21AQ8NDW8 1320 aa9.24□□□□□ -0.93
SPARCL1-201ENST00000282470 ZNF142P52746 1687 aaPredicted RBP9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 ZBTB40Q9NUA8 1239 aa9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 PDZRN3Q9UPQ7 1066 aa9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 VAMP4O75379 141 aa9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 THEMISQ8N1K5 641 aaPredicted RBP9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 CFAP44Q96MT7 982 aa9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 USP19O94966 1318 aa9.23□□□□□ -0.93
SPARCL1-201ENST00000282470 TMEM57Q8N5G2 664 aa9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 SLC26A8Q96RN1 970 aa9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 AMOTL2Q9Y2J4 779 aa9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 EIF4A2Q14240 407 aaKnown RBP9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 ITPRIPQ8IWB1 547 aa9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 ARHGEF10O15013 1369 aa9.22□□□□□ -0.93
SPARCL1-201ENST00000282470 SMC5Q8IY18 1101 aa9.21□□□□□ -0.93
SPARCL1-201ENST00000282470 MRPL50Q8N5N7 158 aaKnown RBP9.21□□□□□ -0.93
SPARCL1-201ENST00000282470 MBIPQ9NS73 344 aa9.21□□□□□ -0.93
SPARCL1-201ENST00000282470 USP35Q9P2H5 1018 aa9.21□□□□□ -0.93
SPARCL1-201ENST00000282470 ABCC4O15439 1325 aa9.21□□□□□ -0.94
SPARCL1-201ENST00000282470 CHD2O14647 1828 aaKnown RBP9.21□□□□□ -0.94
SPARCL1-201ENST00000282470 THUMPD2Q9BTF0 503 aaKnown RBP9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 KDRP35968 1356 aa9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 KIF24Q5T7B8 1368 aa9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 NBR1Q14596 966 aa9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 CHMP4BQ9H444 224 aaKnown RBP9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
SPARCL1-201ENST00000282470 FLT4P35916 1363 aa9.19□□□□□ -0.94
SPARCL1-201ENST00000282470 TSPYL6Q8N831 410 aa9.19□□□□□ -0.94
SPARCL1-201ENST00000282470 LAS1LQ9Y4W2 734 aaKnown RBP9.19□□□□□ -0.94
SPARCL1-201ENST00000282470 KIAA0232Q92628 1395 aa9.19□□□□□ -0.94
SPARCL1-201ENST00000282470 TWISTNBQ3B726 338 aaPredicted RBP9.18□□□□□ -0.94
SPARCL1-201ENST00000282470 AEBP1Q8IUX7 1158 aa9.18□□□□□ -0.94
SPARCL1-201ENST00000282470 ZBTB7BO15156 539 aaPredicted RBP9.18□□□□□ -0.94
SPARCL1-201ENST00000282470 SEC24BO95487 1268 aa9.18□□□□□ -0.94
SPARCL1-201ENST00000282470 SULT6B1Q6IMI4 303 aa9.18□□□□□ -0.94
SPARCL1-201ENST00000282470 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 CRB1P82279 1406 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 FAM83GA6ND36 823 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 HSP90AB2PQ58FF8 381 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 RTL5Q5HYW3 569 aaPredicted RBP9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 C8orf58Q8NAV2 365 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 CHL1O00533 1208 aa9.17□□□□□ -0.94
SPARCL1-201ENST00000282470 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 NWD1Q149M9 1564 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 NUTM2FA1L443 756 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 NUCB1Q02818 461 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 TBC1D32Q96NH3 1257 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 API5Q9BZZ5 524 aaKnown RBP9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 RGS12O14924 1447 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 IGSF1Q8N6C5 1336 aa9.16□□□□□ -0.94
SPARCL1-201ENST00000282470 DAXXQ9UER7 740 aaPredicted RBP9.15□□□□□ -0.94
SPARCL1-201ENST00000282470 PHRF1Q9P1Y6 1649 aaKnown RBP9.15□□□□□ -0.94
SPARCL1-201ENST00000282470 KCNA6P17658 529 aa9.15□□□□□ -0.94
SPARCL1-201ENST00000282470 DCTN1Q14203 1278 aa9.15□□□□□ -0.94
SPARCL1-201ENST00000282470 UPF2Q9HAU5 1272 aaKnown RBP9.15□□□□□ -0.94
SPARCL1-201ENST00000282470 DEKP35659 375 aaKnown RBP9.15□□□□□ -0.95
SPARCL1-201ENST00000282470 NGDNQ8NEJ9 315 aaKnown RBP9.15□□□□□ -0.95
SPARCL1-201ENST00000282470 GCC1Q96CN9 775 aa9.15□□□□□ -0.95
SPARCL1-201ENST00000282470 LTN1O94822 1766 aa9.14□□□□□ -0.95
SPARCL1-201ENST00000282470 RTL1A6NKG5 1358 aa9.14□□□□□ -0.95
SPARCL1-201ENST00000282470 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
SPARCL1-201ENST00000282470 N4BP2Q86UW6 1770 aaPredicted RBP9.13□□□□□ -0.95
SPARCL1-201ENST00000282470 INTS3Q68E01 1043 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms